RNA–Protein interactions for RNA: ENST00000461383.1
VCL-203, Transcript of vinculin, human
Retrieved 9 of 9 RNA–protein pairs in 4.2 ms
VCL-203, Transcript of vinculin, human![human](/images/species-human.png)
TSL 2
Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
VCL-203 | ENST00000461383 | AARS | P49588 | 968 aa | Known RBP eCLIP | 3.65 | □□□□□ -1.83 | 3e-12 | ■■■■■ 123.6 |
VCL-203 | ENST00000461383 | DGCR8 | Q8WYQ5 | 773 aa | Known RBP eCLIP | 1.62 | □□□□□ -2.15 | 1e-10 | ■■■■■ 87.1 |
VCL-203 | ENST00000461383 | SF3B1 | O75533 | 1304 aa | Known RBP eCLIP | 2.59 | □□□□□ -2 | 6e-7 | ■■■■■ 45.7 |
VCL-203 | ENST00000461383 | EIF4G2 | P78344 | 907 aa | Known RBP eCLIP | 5.68 | □□□□□ -1.5 | 6e-6 | ■■■■□ 25.1 |
VCL-203 | ENST00000461383 | TARDBP | Q13148 | 414 aa | Known RBP eCLIP | 3.91 | □□□□□ -1.78 | 3e-9 | ■■■■□ 24.6 |
VCL-203 | ENST00000461383 | BUD13 | Q9BRD0 | 619 aa | Known RBP eCLIP | 4.84 | □□□□□ -1.63 | 9e-7 | ■■■■□ 24.4 |
VCL-203 | ENST00000461383 | YBX3 | P16989 | 372 aa | Known RBP eCLIP | 4.41 | □□□□□ -1.7 | 2e-10 | ■■■□□ 14.8 |
VCL-203 | ENST00000461383 | GTF2F1 | P35269 | 517 aa | Known RBP eCLIP | 4.85 | □□□□□ -1.63 | 2e-6 | ■■■□□ 14.6 |
VCL-203 | ENST00000461383 | DDX24 | Q9GZR7 | 859 aa | Known RBP eCLIP | 3.75 | □□□□□ -1.81 | 4e-8 | ■■□□□ 12.6 |