RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544		A6NN06	94 aa		4.17	□□□□□ -1.74
HCG18-238	ENST00000449544	LYST	Q99698	3801 aa		4.14	□□□□□ -1.75
HCG18-238	ENST00000449544	EPPK1	P58107	5090 aa	Known RBP	4.14	□□□□□ -1.75
HCG18-238	ENST00000449544	PCLO	Q9Y6V0	5065 aa		4.13	□□□□□ -1.75
HCG18-238	ENST00000449544	FAT2	Q9NYQ8	4349 aa		4.12	□□□□□ -1.75
HCG18-238	ENST00000449544	KTN1-AS1	Q86SY8	53 aa		4.11	□□□□□ -1.75
HCG18-238	ENST00000449544	CDC42SE1	Q9NRR8	79 aa		4.11	□□□□□ -1.75
HCG18-238	ENST00000449544	APOB	P04114	4563 aa	Known RBP	4.11	□□□□□ -1.75
HCG18-238	ENST00000449544	KMT2A	Q03164	3969 aa		4.1	□□□□□ -1.75
HCG18-238	ENST00000449544		H3BS24	57 aa		4.08	□□□□□ -1.76
HCG18-238	ENST00000449544	SPATA8	Q6RVD6	105 aa		4.08	□□□□□ -1.76
HCG18-238	ENST00000449544	DNAH17	Q9UFH2	4485 aa		4.08	□□□□□ -1.76
HCG18-238	ENST00000449544	PRAC1	Q96KF2	57 aa		4.07	□□□□□ -1.76
HCG18-238	ENST00000449544	VPS13B	Q7Z7G8	4022 aa		4.03	□□□□□ -1.76
HCG18-238	ENST00000449544	TNP1	P09430	55 aa		4.01	□□□□□ -1.77
HCG18-238	ENST00000449544	DNAH3	Q8TD57	4116 aa		4.01	□□□□□ -1.77
HCG18-238	ENST00000449544	DNAH2	Q9P225	4427 aa		4	□□□□□ -1.77
HCG18-238	ENST00000449544	MT1H	P80294	61 aa		4	□□□□□ -1.77
HCG18-238	ENST00000449544	KRTAP4-1	Q9BYQ7	146 aa		4	□□□□□ -1.77
HCG18-238	ENST00000449544	ABCA13	Q86UQ4	5058 aa		4	□□□□□ -1.77
HCG18-238	ENST00000449544	FAT3	Q8TDW7	4589 aa		3.99	□□□□□ -1.77
HCG18-238	ENST00000449544	MYCBP2	O75592	4640 aa		3.99	□□□□□ -1.77
HCG18-238	ENST00000449544	CMYA5	Q8N3K9	4069 aa		3.98	□□□□□ -1.77
HCG18-238	ENST00000449544	KRTAP10-6	P60371	365 aa	Predicted RBP	3.98	□□□□□ -1.77
HCG18-238	ENST00000449544	LINC01558	Q9Y6Z2	57 aa		3.98	□□□□□ -1.77
HCG18-238	ENST00000449544	LRP1	Q07954	4544 aa	Known RBP	3.97	□□□□□ -1.77
HCG18-238	ENST00000449544	LOR	P23490	312 aa	Predicted RBP	3.97	□□□□□ -1.77
HCG18-238	ENST00000449544		P0C880	135 aa		3.96	□□□□□ -1.77
HCG18-238	ENST00000449544	LRP2	P98164	4655 aa		3.96	□□□□□ -1.78
HCG18-238	ENST00000449544		A0A0A0MQY5	61 aa		3.95	□□□□□ -1.78
HCG18-238	ENST00000449544	HERC1	Q15751	4861 aa		3.94	□□□□□ -1.78
HCG18-238	ENST00000449544	UBR4	Q5T4S7	5183 aa		3.94	□□□□□ -1.78
HCG18-238	ENST00000449544	HSPG2	P98160	4391 aa		3.93	□□□□□ -1.78
HCG18-238	ENST00000449544	PKHD1	P08F94	4074 aa		3.9	□□□□□ -1.79
HCG18-238	ENST00000449544	KRTAP9-2	Q9BYQ4	174 aa		3.9	□□□□□ -1.79
HCG18-238	ENST00000449544	DNAH6	Q9C0G6	4158 aa		3.89	□□□□□ -1.79
HCG18-238	ENST00000449544	DNAH7	Q8WXX0	4024 aa		3.88	□□□□□ -1.79
HCG18-238	ENST00000449544	CRCT1	Q9UGL9	99 aa		3.87	□□□□□ -1.79
HCG18-238	ENST00000449544		H0YAA0	97 aa		3.86	□□□□□ -1.79
HCG18-238	ENST00000449544	DNAH8	Q96JB1	4490 aa		3.85	□□□□□ -1.79
HCG18-238	ENST00000449544	KRTAP3-1	Q9BYR8	98 aa		3.83	□□□□□ -1.8
HCG18-238	ENST00000449544	MT2A	P02795	61 aa		3.83	□□□□□ -1.8
HCG18-238	ENST00000449544	FSIP2	Q5CZC0	6907 aa		3.83	□□□□□ -1.8
HCG18-238	ENST00000449544	KRTAP9-6	A0A140TA67	174 aa		3.81	□□□□□ -1.8
HCG18-238	ENST00000449544	ROMO1	P60602	79 aa		3.79	□□□□□ -1.8
HCG18-238	ENST00000449544	RNF213	Q63HN8	5207 aa		3.77	□□□□□ -1.81
HCG18-238	ENST00000449544	MT1F	P04733	61 aa		3.75	□□□□□ -1.81
HCG18-238	ENST00000449544	KRTAP8-1	Q8IUC2	63 aa		3.74	□□□□□ -1.81
HCG18-238	ENST00000449544	LUZP6	Q538Z0	58 aa		3.72	□□□□□ -1.81
HCG18-238	ENST00000449544	FRAS1	Q86XX4	4008 aa		3.72	□□□□□ -1.81
HCG18-238	ENST00000449544	PKHD1L1	Q86WI1	4243 aa		3.71	□□□□□ -1.81
HCG18-238	ENST00000449544	PKD1	P98161	4303 aa		3.69	□□□□□ -1.82
HCG18-238	ENST00000449544	HECTD4	Q9Y4D8	3996 aa		3.68	□□□□□ -1.82
HCG18-238	ENST00000449544	KRTAP25-1	Q3LHN0	102 aa		3.67	□□□□□ -1.82
HCG18-238	ENST00000449544	LCE2B	O14633	110 aa		3.65	□□□□□ -1.82
HCG18-238	ENST00000449544	SPRR2F	Q96RM1	72 aa		3.65	□□□□□ -1.83
HCG18-238	ENST00000449544	LCE2A	Q5TA79	106 aa	Predicted RBP	3.63	□□□□□ -1.83
HCG18-238	ENST00000449544	LCE2C	Q5TA81	110 aa		3.63	□□□□□ -1.83
HCG18-238	ENST00000449544	HMCN2	Q8NDA2	5059 aa		3.62	□□□□□ -1.83
HCG18-238	ENST00000449544	KRTAP10-12	P60413	245 aa		3.61	□□□□□ -1.83
HCG18-238	ENST00000449544	PP632	Q6XCG6	107 aa		3.61	□□□□□ -1.83
HCG18-238	ENST00000449544	KRTAP19-1	Q8IUB9	90 aa		3.6	□□□□□ -1.83
HCG18-238	ENST00000449544	FAT4	Q6V0I7	4981 aa		3.58	□□□□□ -1.84
HCG18-238	ENST00000449544	LPA	P08519	4548 aa		3.57	□□□□□ -1.84
HCG18-238	ENST00000449544	KRTAP9-8	Q9BYQ0	159 aa		3.56	□□□□□ -1.84
HCG18-238	ENST00000449544	C10orf95	Q9H7T3	257 aa		3.55	□□□□□ -1.84
HCG18-238	ENST00000449544	KRTAP12-2	P59991	146 aa		3.55	□□□□□ -1.84
HCG18-238	ENST00000449544	SPRR2G	Q9BYE4	73 aa		3.54	□□□□□ -1.84
HCG18-238	ENST00000449544	KRTAP12-1	P59990	96 aa		3.54	□□□□□ -1.84
HCG18-238	ENST00000449544	NDUFAF8	A1L188	74 aa		3.52	□□□□□ -1.85
HCG18-238	ENST00000449544	KRTAP9-7	A8MTY7	169 aa		3.51	□□□□□ -1.85
HCG18-238	ENST00000449544	KRTAP13-4	Q3LI77	160 aa		3.51	□□□□□ -1.85
HCG18-238	ENST00000449544	SPRR2E	P22531	72 aa		3.51	□□□□□ -1.85
HCG18-238	ENST00000449544	SPRR2B	P35325	72 aa		3.51	□□□□□ -1.85
HCG18-238	ENST00000449544	SPRR2A	P35326	72 aa		3.51	□□□□□ -1.85
HCG18-238	ENST00000449544	KRTAP9-3	Q9BYQ3	159 aa		3.48	□□□□□ -1.85
HCG18-238	ENST00000449544	KRTAP19-2	Q3LHN2	52 aa		3.46	□□□□□ -1.86
HCG18-238	ENST00000449544	KRTAP15-1	Q3LI76	137 aa		3.44	□□□□□ -1.86
HCG18-238	ENST00000449544	KRTAP10-5	P60370	271 aa		3.42	□□□□□ -1.86
HCG18-238	ENST00000449544	SPRR2D	P22532	72 aa		3.4	□□□□□ -1.87
HCG18-238	ENST00000449544	KRTAP19-8	Q3LI54	63 aa		3.4	□□□□□ -1.87
HCG18-238	ENST00000449544	MUC2	Q02817	5179 aa		3.37	□□□□□ -1.87
HCG18-238	ENST00000449544	KRTAP12-3	P60328	96 aa		3.37	□□□□□ -1.87
HCG18-238	ENST00000449544	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.37	□□□□□ -1.87
HCG18-238	ENST00000449544	TNXB	P22105	4242 aa		3.36	□□□□□ -1.87
HCG18-238	ENST00000449544	KRTAP19-6	Q3LI70	58 aa		3.35	□□□□□ -1.87
HCG18-238	ENST00000449544	KRTAP10-7	P60409	375 aa	Predicted RBP	3.35	□□□□□ -1.87
HCG18-238	ENST00000449544	MT1B	P07438	61 aa		3.34	□□□□□ -1.87
HCG18-238	ENST00000449544	SYNE2	Q8WXH0	6885 aa	Known RBP	3.34	□□□□□ -1.87
HCG18-238	ENST00000449544	LCE3A	Q5TA76	89 aa		3.31	□□□□□ -1.88
HCG18-238	ENST00000449544	MUC17	Q685J3	4493 aa		3.29	□□□□□ -1.88
HCG18-238	ENST00000449544	KRTAP20-1	Q3LI63	56 aa		3.27	□□□□□ -1.89
HCG18-238	ENST00000449544	FLG	P20930	4061 aa	Predicted RBP	3.25	□□□□□ -1.89
HCG18-238	ENST00000449544	KRTAP6-3	Q3LI67	103 aa		3.23	□□□□□ -1.89
HCG18-238	ENST00000449544	MT1X	P80297	61 aa		3.22	□□□□□ -1.89
HCG18-238	ENST00000449544	KRTAP4-8	A0A0G2JLE6	195 aa		3.2	□□□□□ -1.9
HCG18-238	ENST00000449544	KRTAP4-8	Q9BYQ9	185 aa		3.2	□□□□□ -1.9
HCG18-238	ENST00000449544	KRTAP19-5	Q3LI72	72 aa		3.19	□□□□□ -1.9
HCG18-238	ENST00000449544	SYNE1	Q8NF91	8797 aa	Known RBP	3.13	□□□□□ -1.91
HCG18-238	ENST00000449544	KMT2D	O14686	5537 aa		3.13	□□□□□ -1.91

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