RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 TEP1Q99973 2627 aaKnown RBP0.02□□□□□ -2.41
PMS1-216ENST00000447734 ACACBO00763 2458 aa0.02□□□□□ -2.41
PMS1-216ENST00000447734 COL6A5A8TX70 2615 aa0□□□□□ -2.41
PMS1-216ENST00000447734 ATP7AQ04656 1500 aa0□□□□□ -2.41
PMS1-216ENST00000447734 RNF213Q63HN8 5207 aa0□□□□□ -2.41
PMS1-216ENST00000447734 CLPSL2Q6UWE3 100 aa0□□□□□ -2.41
PMS1-216ENST00000447734 MYO18BQ8IUG5 2567 aa-0□□□□□ -2.41
PMS1-216ENST00000447734 POLR2KP53803 58 aaKnown RBP-0.01□□□□□ -2.41
PMS1-216ENST00000447734 KRTAP20-1Q3LI63 56 aa-0.01□□□□□ -2.41
PMS1-216ENST00000447734 CCDC168Q8NDH2 2452 aa-0.02□□□□□ -2.41
PMS1-216ENST00000447734 KIAA1109Q2LD37 5005 aa-0.03□□□□□ -2.41
PMS1-216ENST00000447734 MXRA5Q9NR99 2828 aa-0.04□□□□□ -2.42
PMS1-216ENST00000447734 FAT3Q8TDW7 4589 aa-0.04□□□□□ -2.42
PMS1-216ENST00000447734 DNAH2Q9P225 4427 aa-0.04□□□□□ -2.42
PMS1-216ENST00000447734 SAMD9LQ8IVG5 1584 aa-0.04□□□□□ -2.42
PMS1-216ENST00000447734 RYR3Q15413 4870 aa-0.04□□□□□ -2.42
PMS1-216ENST00000447734 RANBP2P49792 3224 aaKnown RBP-0.04□□□□□ -2.42
PMS1-216ENST00000447734 SPART-AS1P0CW21 52 aa-0.05□□□□□ -2.42
PMS1-216ENST00000447734 ABCA13Q86UQ4 5058 aa-0.06□□□□□ -2.42
PMS1-216ENST00000447734 COL12A1Q99715 3063 aa-0.06□□□□□ -2.42
PMS1-216ENST00000447734 KRTAP19-7Q3SYF9 63 aa-0.06□□□□□ -2.42
PMS1-216ENST00000447734 MGAM2Q2M2H8 2515 aa-0.06□□□□□ -2.42
PMS1-216ENST00000447734 APOBP04114 4563 aaKnown RBP-0.06□□□□□ -2.42
PMS1-216ENST00000447734 LAMA5O15230 3695 aa-0.07□□□□□ -2.42
PMS1-216ENST00000447734 KRTAP8-1Q8IUC2 63 aa-0.07□□□□□ -2.42
PMS1-216ENST00000447734 DNAH6Q9C0G6 4158 aa-0.07□□□□□ -2.42
PMS1-216ENST00000447734 NBPF19A0A087WUL8 3843 aa-0.08□□□□□ -2.42
PMS1-216ENST00000447734 TRIOO75962 3097 aa-0.08□□□□□ -2.42
PMS1-216ENST00000447734 SPENQ96T58 3664 aaKnown RBP-0.08□□□□□ -2.42
PMS1-216ENST00000447734 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
PMS1-216ENST00000447734 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.09□□□□□ -2.42
PMS1-216ENST00000447734 TOP2AP11388 1531 aaKnown RBP-0.09□□□□□ -2.42
PMS1-216ENST00000447734 HERC1Q15751 4861 aa-0.1□□□□□ -2.42
PMS1-216ENST00000447734 USH2AO75445 5202 aa-0.1□□□□□ -2.43
PMS1-216ENST00000447734 DNAH11Q96DT5 4516 aa-0.1□□□□□ -2.43
PMS1-216ENST00000447734 KRTAP19-5Q3LI72 72 aa-0.1□□□□□ -2.43
PMS1-216ENST00000447734 LAMA1P25391 3075 aa-0.1□□□□□ -2.43
PMS1-216ENST00000447734 TLN2Q9Y4G6 2542 aa-0.11□□□□□ -2.43
PMS1-216ENST00000447734 HYDINQ4G0P3 5121 aa-0.11□□□□□ -2.43
PMS1-216ENST00000447734 WDR87Q6ZQQ6 2873 aa-0.11□□□□□ -2.43
PMS1-216ENST00000447734 VPS13DQ5THJ4 4388 aa-0.11□□□□□ -2.43
PMS1-216ENST00000447734 SMR3BP02814 79 aaPredicted RBP-0.12□□□□□ -2.43
PMS1-216ENST00000447734 DEFB1P60022 68 aa-0.13□□□□□ -2.43
PMS1-216ENST00000447734 USP9XQ93008 2570 aaPredicted RBP-0.13□□□□□ -2.43
PMS1-216ENST00000447734 CELSR3Q9NYQ7 3312 aa-0.13□□□□□ -2.43
PMS1-216ENST00000447734 EPPK1P58107 5090 aaKnown RBP-0.14□□□□□ -2.43
PMS1-216ENST00000447734 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
PMS1-216ENST00000447734 DNAH1Q9P2D7 4330 aa-0.14□□□□□ -2.43
PMS1-216ENST00000447734 SPTBN5Q9NRC6 3674 aaKnown RBP-0.15□□□□□ -2.43
PMS1-216ENST00000447734 FRYQ5TBA9 3013 aa-0.16□□□□□ -2.44
PMS1-216ENST00000447734 FAT1Q14517 4588 aa-0.16□□□□□ -2.44
PMS1-216ENST00000447734 DNAH7Q8WXX0 4024 aa-0.16□□□□□ -2.44
PMS1-216ENST00000447734 ITPR3Q14573 2671 aa-0.17□□□□□ -2.44
PMS1-216ENST00000447734 KRTAP19-8Q3LI54 63 aa-0.17□□□□□ -2.44
PMS1-216ENST00000447734 DNAH8Q96JB1 4490 aa-0.17□□□□□ -2.44
PMS1-216ENST00000447734 HERC2O95714 4834 aa-0.19□□□□□ -2.44
PMS1-216ENST00000447734 RPL39P62891 51 aaKnown RBP-0.19□□□□□ -2.44
PMS1-216ENST00000447734 MT1HP80294 61 aa-0.21□□□□□ -2.44
PMS1-216ENST00000447734 TOMM7Q9P0U1 55 aa-0.21□□□□□ -2.44
PMS1-216ENST00000447734 CHD7Q9P2D1 2997 aa-0.22□□□□□ -2.44
PMS1-216ENST00000447734 ITPR2Q14571 2701 aa-0.22□□□□□ -2.44
PMS1-216ENST00000447734 ITPR1Q14643 2758 aa-0.23□□□□□ -2.45
PMS1-216ENST00000447734 CEP295Q9C0D2 2601 aa-0.24□□□□□ -2.45
PMS1-216ENST00000447734 CFAP46Q8IYW2 2715 aa-0.24□□□□□ -2.45
PMS1-216ENST00000447734 NIPBLQ6KC79 2804 aaeCLIP-0.24□□□□□ -2.45
PMS1-216ENST00000447734 TEX15Q9BXT5 2789 aa-0.25□□□□□ -2.45
PMS1-216ENST00000447734 STARD9Q9P2P6 4700 aa-0.25□□□□□ -2.45
PMS1-216ENST00000447734 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
PMS1-216ENST00000447734 LAMA2P24043 3122 aaKnown RBP-0.26□□□□□ -2.45
PMS1-216ENST00000447734 MROH2BQ7Z745 1585 aa-0.27□□□□□ -2.45
PMS1-216ENST00000447734 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
PMS1-216ENST00000447734 SNRPGP62308 76 aaKnown RBP-0.27□□□□□ -2.45
PMS1-216ENST00000447734 ADGRG4Q8IZF6 3080 aa-0.27□□□□□ -2.45
PMS1-216ENST00000447734 MUC17Q685J3 4493 aa-0.28□□□□□ -2.45
PMS1-216ENST00000447734 SPTAN1Q13813 2472 aaKnown RBP-0.28□□□□□ -2.45
PMS1-216ENST00000447734 MT4P47944 62 aa-0.28□□□□□ -2.45
PMS1-216ENST00000447734 LEAP2Q969E1 77 aa-0.28□□□□□ -2.45
PMS1-216ENST00000447734 RPL39LQ96EH5 51 aaKnown RBP-0.28□□□□□ -2.45
PMS1-216ENST00000447734 RELNP78509 3460 aa-0.28□□□□□ -2.45
PMS1-216ENST00000447734 LAMA3Q16787 3333 aa-0.28□□□□□ -2.45
PMS1-216ENST00000447734 TLN1Q9Y490 2541 aaKnown RBP-0.29□□□□□ -2.46
PMS1-216ENST00000447734 DNHD1Q96M86 4753 aa-0.29□□□□□ -2.46
PMS1-216ENST00000447734 C5orf42Q9H799 3197 aa-0.31□□□□□ -2.46
PMS1-216ENST00000447734 CRYBG3Q68DQ2 2970 aa-0.31□□□□□ -2.46
PMS1-216ENST00000447734 ZFHX4Q86UP3 3567 aa-0.32□□□□□ -2.46
PMS1-216ENST00000447734 MGAQ8IWI9 3026 aa-0.32□□□□□ -2.46
PMS1-216ENST00000447734 CMYA5Q8N3K9 4069 aa-0.33□□□□□ -2.46
PMS1-216ENST00000447734 DUOX1Q9NRD9 1551 aa-0.33□□□□□ -2.46
PMS1-216ENST00000447734 MT1EP04732 61 aa-0.34□□□□□ -2.46
PMS1-216ENST00000447734 MYO9AB2RTY4 2548 aa-0.34□□□□□ -2.46
PMS1-216ENST00000447734 PLECQ15149 4684 aaKnown RBP-0.35□□□□□ -2.46
PMS1-216ENST00000447734 LINC01590Q5TEZ4 76 aa-0.35□□□□□ -2.47
PMS1-216ENST00000447734 DNAH10Q8IVF4 4471 aa-0.36□□□□□ -2.47
PMS1-216ENST00000447734 KRTAP19-6Q3LI70 58 aa-0.36□□□□□ -2.47
PMS1-216ENST00000447734 MYO15AQ9UKN7 3530 aa-0.36□□□□□ -2.47
PMS1-216ENST00000447734 CSMD1Q96PZ7 3565 aa-0.37□□□□□ -2.47
PMS1-216ENST00000447734 SRCAPQ6ZRS2 3230 aa-0.38□□□□□ -2.47
PMS1-216ENST00000447734 DMXL2Q8TDJ6 3036 aa-0.38□□□□□ -2.47
PMS1-216ENST00000447734 LRBAP50851 2863 aa-0.39□□□□□ -2.47
PMS1-216ENST00000447734 GCC2Q8IWJ2 1684 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms