RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
PMS1-216ENST00000447734 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
PMS1-216ENST00000447734 SENP3Q9H4L4 574 aaPredicted RBP14.1□□□□□ -0.15
PMS1-216ENST00000447734 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
PMS1-216ENST00000447734 FOXD1Q16676 465 aa13.27□□□□□ -0.29
PMS1-216ENST00000447734 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
PMS1-216ENST00000447734 MSH5O43196 834 aa12.4□□□□□ -0.42
PMS1-216ENST00000447734 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
PMS1-216ENST00000447734 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
PMS1-216ENST00000447734 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
PMS1-216ENST00000447734 ADRA2BP18089 450 aa12.14□□□□□ -0.47
PMS1-216ENST00000447734 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
PMS1-216ENST00000447734 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
PMS1-216ENST00000447734 SCAF1Q9H7N4 1312 aaKnown RBP10.96□□□□□ -0.65
PMS1-216ENST00000447734 CACNB1Q02641 598 aaPredicted RBP10.79□□□□□ -0.68
PMS1-216ENST00000447734 HOXD11P31277 338 aaPredicted RBP10.69□□□□□ -0.7
PMS1-216ENST00000447734 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
PMS1-216ENST00000447734 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
PMS1-216ENST00000447734 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
PMS1-216ENST00000447734 CNKSR2Q8WXI2 1034 aa10.52□□□□□ -0.73
PMS1-216ENST00000447734 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
PMS1-216ENST00000447734 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
PMS1-216ENST00000447734 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
PMS1-216ENST00000447734 NPM3O75607 178 aaKnown RBP10.09□□□□□ -0.79
PMS1-216ENST00000447734 NCBP3Q53F19 620 aaKnown RBP10.09□□□□□ -0.79
PMS1-216ENST00000447734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.85e-6■□□□□ 11
PMS1-216ENST00000447734 U3KPZ7 1027 aaPredicted RBP9.96□□□□□ -0.82
PMS1-216ENST00000447734 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
PMS1-216ENST00000447734 DSG3P32926 999 aa9.88□□□□□ -0.83
PMS1-216ENST00000447734 POTEHQ6S545 545 aa9.82□□□□□ -0.84
PMS1-216ENST00000447734 CAPN15O75808 1086 aa9.78□□□□□ -0.84
PMS1-216ENST00000447734 SLC4A2P04920 1241 aa9.74□□□□□ -0.85
PMS1-216ENST00000447734 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.86
PMS1-216ENST00000447734 KCNA4P22459 653 aa9.68□□□□□ -0.86
PMS1-216ENST00000447734 ABCB7O75027 752 aa9.59□□□□□ -0.87
PMS1-216ENST00000447734 TRHP20396 242 aaPredicted RBP9.59□□□□□ -0.87
PMS1-216ENST00000447734 ZNF219Q9P2Y4 722 aaPredicted RBP9.52□□□□□ -0.89
PMS1-216ENST00000447734 APLP2Q06481 763 aa9.45□□□□□ -0.9
PMS1-216ENST00000447734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.43□□□□□ -0.9
PMS1-216ENST00000447734 HNRNPUL2Q1KMD3 747 aaKnown RBP9.43□□□□□ -0.9
PMS1-216ENST00000447734 SAMD1Q6SPF0 538 aaPredicted RBP9.4□□□□□ -0.9
PMS1-216ENST00000447734 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
PMS1-216ENST00000447734 POLA2Q14181 598 aa9.3□□□□□ -0.92
PMS1-216ENST00000447734 CHRDL2Q6WN34 429 aa9.28□□□□□ -0.92
PMS1-216ENST00000447734 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
PMS1-216ENST00000447734 CSRNP3Q8WYN3 585 aa9.23□□□□□ -0.93
PMS1-216ENST00000447734 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
PMS1-216ENST00000447734 SLC4A1APQ9BWU0 796 aaKnown RBP9.17□□□□□ -0.94
PMS1-216ENST00000447734 AKT1S1Q96B36 256 aa9.09□□□□□ -0.95
PMS1-216ENST00000447734 SP7Q8TDD2 431 aaPredicted RBP9.07□□□□□ -0.96
PMS1-216ENST00000447734 REM2Q8IYK8 340 aaPredicted RBP9.05□□□□□ -0.96
PMS1-216ENST00000447734 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
PMS1-216ENST00000447734 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
PMS1-216ENST00000447734 OSCARQ8IYS5 282 aa9.03□□□□□ -0.96
PMS1-216ENST00000447734 SLC24A1O60721 1099 aa9.02□□□□□ -0.97
PMS1-216ENST00000447734 ZBTB12Q9Y330 459 aaPredicted RBP8.99□□□□□ -0.97
PMS1-216ENST00000447734 PITPNM1O00562 1244 aa8.97□□□□□ -0.97
PMS1-216ENST00000447734 ZBTB22O15209 634 aa8.96□□□□□ -0.98
PMS1-216ENST00000447734 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
PMS1-216ENST00000447734 EVX2Q03828 476 aa8.89□□□□□ -0.99
PMS1-216ENST00000447734 HAX1O00165 279 aa8.87□□□□□ -0.99
PMS1-216ENST00000447734 AMER1Q5JTC6 1135 aaPredicted RBP8.77□□□□□ -1.01
PMS1-216ENST00000447734 ATXN8OSP0DMR3 200 aa8.76□□□□□ -1.01
PMS1-216ENST00000447734 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
PMS1-216ENST00000447734 SPDYE2BA6NHP3 402 aa8.75□□□□□ -1.01
PMS1-216ENST00000447734 SPDYE6P0CI01 402 aa8.75□□□□□ -1.01
PMS1-216ENST00000447734 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
PMS1-216ENST00000447734 SPDYE2Q495Y8 402 aa8.75□□□□□ -1.01
PMS1-216ENST00000447734 PRKAR2AP13861 404 aaKnown RBP8.7□□□□□ -1.02
PMS1-216ENST00000447734 C19orf67A6NJJ6 358 aa8.67□□□□□ -1.02
PMS1-216ENST00000447734 FBLN2P98095 1184 aa8.67□□□□□ -1.02
PMS1-216ENST00000447734 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
PMS1-216ENST00000447734 CLEC11AQ9Y240 323 aa8.65□□□□□ -1.02
PMS1-216ENST00000447734 SPDYE1Q8NFV5 336 aaPredicted RBP8.64□□□□□ -1.03
PMS1-216ENST00000447734 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
PMS1-216ENST00000447734 GABBR2O75899 941 aa8.59□□□□□ -1.03
PMS1-216ENST00000447734 CHADLQ6NUI6 762 aa8.58□□□□□ -1.04
PMS1-216ENST00000447734 LHX8Q68G74 356 aa8.5□□□□□ -1.05
PMS1-216ENST00000447734 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
PMS1-216ENST00000447734 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
PMS1-216ENST00000447734 PRR29P0C7W0 189 aa8.46□□□□□ -1.06
PMS1-216ENST00000447734 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
PMS1-216ENST00000447734 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
PMS1-216ENST00000447734 FKBP8Q14318 412 aa8.34□□□□□ -1.07
PMS1-216ENST00000447734 ZNF579Q8NAF0 562 aaKnown RBP8.28□□□□□ -1.08
PMS1-216ENST00000447734 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
PMS1-216ENST00000447734 CLCN6P51797 869 aa8.25□□□□□ -1.09
PMS1-216ENST00000447734 GALR2O43603 387 aaPredicted RBP8.24□□□□□ -1.09
PMS1-216ENST00000447734 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
PMS1-216ENST00000447734 DCBLD2Q96PD2 775 aa8.22□□□□□ -1.09
PMS1-216ENST00000447734 POTEB2H3BUK9 544 aa8.21□□□□□ -1.1
PMS1-216ENST00000447734 OTUD5Q96G74 571 aa8.18□□□□□ -1.1
PMS1-216ENST00000447734 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.1
PMS1-216ENST00000447734 PHF12Q96QT6 1004 aa8.14□□□□□ -1.11
PMS1-216ENST00000447734 PELP1Q8IZL8 1130 aaKnown RBP8.13□□□□□ -1.11
PMS1-216ENST00000447734 PLSCR2Q9NRY7 297 aa8.12□□□□□ -1.11
PMS1-216ENST00000447734 STAG3Q9UJ98 1225 aa8.12□□□□□ -1.11
PMS1-216ENST00000447734 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
PMS1-216ENST00000447734 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
PMS1-216ENST00000447734 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms