RNA–Protein interactions for RNA: ENST00000440028.2

MSL3P1-202, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene MSL3P1, Length 1,468 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-202ENST00000440028 HUWE1Q7Z6Z7 4374 aaKnown RBP3.45□□□□□ -1.86
MSL3P1-202ENST00000440028 LINC00304Q8N9R0 145 aa3.44□□□□□ -1.86
MSL3P1-202ENST00000440028 ALMS1Q8TCU4 4167 aa3.42□□□□□ -1.86
MSL3P1-202ENST00000440028 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
MSL3P1-202ENST00000440028 H0YAA0 97 aa3.41□□□□□ -1.86
MSL3P1-202ENST00000440028 H1FX-AS1Q4G0G2 97 aa3.41□□□□□ -1.86
MSL3P1-202ENST00000440028 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
MSL3P1-202ENST00000440028 CSMD3Q7Z407 3707 aa3.4□□□□□ -1.86
MSL3P1-202ENST00000440028 Q6ZSA8 131 aa3.4□□□□□ -1.87
MSL3P1-202ENST00000440028 KRTAP1-5Q9BYS1 174 aa3.4□□□□□ -1.87
MSL3P1-202ENST00000440028 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
MSL3P1-202ENST00000440028 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
MSL3P1-202ENST00000440028 APLNQ9ULZ1 77 aa3.39□□□□□ -1.87
MSL3P1-202ENST00000440028 HECTD4Q9Y4D8 3996 aa3.39□□□□□ -1.87
MSL3P1-202ENST00000440028 NBDYA0A0U1RRE5 68 aa3.38□□□□□ -1.87
MSL3P1-202ENST00000440028 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
MSL3P1-202ENST00000440028 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
MSL3P1-202ENST00000440028 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
MSL3P1-202ENST00000440028 STARD9Q9P2P6 4700 aa3.37□□□□□ -1.87
MSL3P1-202ENST00000440028 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
MSL3P1-202ENST00000440028 Q6ZRN7 208 aaPredicted RBP3.35□□□□□ -1.87
MSL3P1-202ENST00000440028 R4GN34 69 aa3.35□□□□□ -1.87
MSL3P1-202ENST00000440028 SPINK1P00995 79 aa3.34□□□□□ -1.88
MSL3P1-202ENST00000440028 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.88
MSL3P1-202ENST00000440028 PLECQ15149 4684 aaKnown RBP3.32□□□□□ -1.88
MSL3P1-202ENST00000440028 A0A087WTM6 91 aa3.32□□□□□ -1.88
MSL3P1-202ENST00000440028 RPS29P62273 56 aaKnown RBP3.32□□□□□ -1.88
MSL3P1-202ENST00000440028 RPL37P61927 97 aaKnown RBP3.31□□□□□ -1.88
MSL3P1-202ENST00000440028 HERC1Q15751 4861 aa3.31□□□□□ -1.88
MSL3P1-202ENST00000440028 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
MSL3P1-202ENST00000440028 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
MSL3P1-202ENST00000440028 DMBT1Q9UGM3 2413 aaPredicted RBP3.26□□□□□ -1.89
MSL3P1-202ENST00000440028 VPS13DQ5THJ4 4388 aa3.25□□□□□ -1.89
MSL3P1-202ENST00000440028 KMT2AQ03164 3969 aa3.25□□□□□ -1.89
MSL3P1-202ENST00000440028 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
MSL3P1-202ENST00000440028 DNAH10Q8IVF4 4471 aa3.23□□□□□ -1.89
MSL3P1-202ENST00000440028 A0A1B0GVY2 172 aa3.23□□□□□ -1.89
MSL3P1-202ENST00000440028 DNAH6Q9C0G6 4158 aa3.22□□□□□ -1.89
MSL3P1-202ENST00000440028 KRTAP10-7P60409 375 aaPredicted RBP3.21□□□□□ -1.9
MSL3P1-202ENST00000440028 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
MSL3P1-202ENST00000440028 PKHD1P08F94 4074 aa3.19□□□□□ -1.9
MSL3P1-202ENST00000440028 DNAH17Q9UFH2 4485 aa3.18□□□□□ -1.9
MSL3P1-202ENST00000440028 DNAH2Q9P225 4427 aa3.18□□□□□ -1.9
MSL3P1-202ENST00000440028 SRRM2Q9UQ35 2752 aaKnown RBP3.17□□□□□ -1.9
MSL3P1-202ENST00000440028 KRTAP1-4P0C5Y4 121 aa3.17□□□□□ -1.9
MSL3P1-202ENST00000440028 INE1O15225 51 aa3.16□□□□□ -1.9
MSL3P1-202ENST00000440028 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.9
MSL3P1-202ENST00000440028 S4R3F8 94 aa3.14□□□□□ -1.91
MSL3P1-202ENST00000440028 DYNC1H1Q14204 4646 aaKnown RBP3.14□□□□□ -1.91
MSL3P1-202ENST00000440028 PKD1P98161 4303 aa3.13□□□□□ -1.91
MSL3P1-202ENST00000440028 HSPG2P98160 4391 aa3.13□□□□□ -1.91
MSL3P1-202ENST00000440028 DNAH11Q96DT5 4516 aa3.13□□□□□ -1.91
MSL3P1-202ENST00000440028 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
MSL3P1-202ENST00000440028 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
MSL3P1-202ENST00000440028 M0QZ58 72 aa3.1□□□□□ -1.91
MSL3P1-202ENST00000440028 SMR3BP02814 79 aaPredicted RBP3.1□□□□□ -1.91
MSL3P1-202ENST00000440028 A0A0D9SG42 100 aa3.09□□□□□ -1.92
MSL3P1-202ENST00000440028 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
MSL3P1-202ENST00000440028 LRP1BQ9NZR2 4599 aa3.08□□□□□ -1.92
MSL3P1-202ENST00000440028 DNAH8Q96JB1 4490 aa3.08□□□□□ -1.92
MSL3P1-202ENST00000440028 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
MSL3P1-202ENST00000440028 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
MSL3P1-202ENST00000440028 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
MSL3P1-202ENST00000440028 Q5VSD8 79 aa3.05□□□□□ -1.92
MSL3P1-202ENST00000440028 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
MSL3P1-202ENST00000440028 APOBP04114 4563 aaKnown RBP3.04□□□□□ -1.92
MSL3P1-202ENST00000440028 C9orf92A6NGG3 77 aa3.04□□□□□ -1.92
MSL3P1-202ENST00000440028 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
MSL3P1-202ENST00000440028 KRTAP12-1P59990 96 aa3.03□□□□□ -1.92
MSL3P1-202ENST00000440028 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
MSL3P1-202ENST00000440028 PLAC4Q8WY50 150 aa3.03□□□□□ -1.92
MSL3P1-202ENST00000440028 FLG2Q5D862 2391 aaPredicted RBP3.03□□□□□ -1.92
MSL3P1-202ENST00000440028 KRTAP12-2P59991 146 aa3.03□□□□□ -1.93
MSL3P1-202ENST00000440028 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.93
MSL3P1-202ENST00000440028 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
MSL3P1-202ENST00000440028 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
MSL3P1-202ENST00000440028 VPS13BQ7Z7G8 4022 aa3□□□□□ -1.93
MSL3P1-202ENST00000440028 FAT1Q14517 4588 aa2.99□□□□□ -1.93
MSL3P1-202ENST00000440028 KRTAP10-4P60372 401 aaPredicted RBP2.97□□□□□ -1.93
MSL3P1-202ENST00000440028 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
MSL3P1-202ENST00000440028 MUC2Q02817 5179 aa2.95□□□□□ -1.94
MSL3P1-202ENST00000440028 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
MSL3P1-202ENST00000440028 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
MSL3P1-202ENST00000440028 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.95
MSL3P1-202ENST00000440028 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
MSL3P1-202ENST00000440028 LRP1Q07954 4544 aaKnown RBP2.89□□□□□ -1.95
MSL3P1-202ENST00000440028 LRP2P98164 4655 aa2.87□□□□□ -1.95
MSL3P1-202ENST00000440028 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
MSL3P1-202ENST00000440028 MT3P25713 68 aa2.87□□□□□ -1.95
MSL3P1-202ENST00000440028 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
MSL3P1-202ENST00000440028 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
MSL3P1-202ENST00000440028 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
MSL3P1-202ENST00000440028 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
MSL3P1-202ENST00000440028 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
MSL3P1-202ENST00000440028 TNXBP22105 4242 aa2.79□□□□□ -1.96
MSL3P1-202ENST00000440028 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
MSL3P1-202ENST00000440028 TNP1P09430 55 aa2.75□□□□□ -1.97
MSL3P1-202ENST00000440028 LPAP08519 4548 aa2.71□□□□□ -1.98
MSL3P1-202ENST00000440028 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
MSL3P1-202ENST00000440028 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms