RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 A0A1B0GUL6 1792 aa-0.47□□□□□ -2.48
PTPN4-205ENST00000433888 CSMD1Q96PZ7 3565 aa-0.47□□□□□ -2.48
PTPN4-205ENST00000433888 ITPR1Q14643 2758 aa-0.47□□□□□ -2.48
PTPN4-205ENST00000433888 ACACBO00763 2458 aa-0.47□□□□□ -2.48
PTPN4-205ENST00000433888 KAAG1Q9UBP8 84 aa-0.47□□□□□ -2.48
PTPN4-205ENST00000433888 ACACAQ13085 2346 aa-0.47□□□□□ -2.48
PTPN4-205ENST00000433888 COL6A5A8TX70 2615 aa-0.48□□□□□ -2.49
PTPN4-205ENST00000433888 UGGT1Q9NYU2 1555 aa-0.48□□□□□ -2.49
PTPN4-205ENST00000433888 MGAM2Q2M2H8 2515 aa-0.48□□□□□ -2.49
PTPN4-205ENST00000433888 LINC00308Q8TCZ7 52 aa-0.48□□□□□ -2.49
PTPN4-205ENST00000433888 NMES1Q9C002 83 aa-0.48□□□□□ -2.49
PTPN4-205ENST00000433888 CHD7Q9P2D1 2997 aa-0.48□□□□□ -2.49
PTPN4-205ENST00000433888 MMP24-AS1A0A0U1RRL7 71 aa-0.49□□□□□ -2.49
PTPN4-205ENST00000433888 CLASP1Q7Z460 1538 aa-0.49□□□□□ -2.49
PTPN4-205ENST00000433888 SRCAPQ6ZRS2 3230 aa-0.5□□□□□ -2.49
PTPN4-205ENST00000433888 IGIPA6NJ69 53 aa-0.51□□□□□ -2.49
PTPN4-205ENST00000433888 TIAM1Q13009 1591 aa-0.51□□□□□ -2.49
PTPN4-205ENST00000433888 SMG1Q96Q15 3661 aaKnown RBP-0.51□□□□□ -2.49
PTPN4-205ENST00000433888 NOP10Q9NPE3 64 aaKnown RBP-0.51□□□□□ -2.49
PTPN4-205ENST00000433888 ABRACLQ9P1F3 81 aa-0.51□□□□□ -2.49
PTPN4-205ENST00000433888 TRRAPQ9Y4A5 3859 aa-0.51□□□□□ -2.49
PTPN4-205ENST00000433888 CELSR3Q9NYQ7 3312 aa-0.51□□□□□ -2.49
PTPN4-205ENST00000433888 FAM186AA6NE01 2351 aa-0.52□□□□□ -2.49
PTPN4-205ENST00000433888 ALS2Q96Q42 1657 aa-0.52□□□□□ -2.49
PTPN4-205ENST00000433888 CPS1P31327 1500 aa-0.52□□□□□ -2.49
PTPN4-205ENST00000433888 EFCAB6Q5THR3 1501 aa-0.53□□□□□ -2.49
PTPN4-205ENST00000433888 TNP1P09430 55 aa-0.53□□□□□ -2.49
PTPN4-205ENST00000433888 SERF2P84101 59 aa-0.53□□□□□ -2.49
PTPN4-205ENST00000433888 WFDC10BQ8IUB3 73 aa-0.53□□□□□ -2.49
PTPN4-205ENST00000433888 EYSQ5T1H1 3165 aa-0.53□□□□□ -2.49
PTPN4-205ENST00000433888 RIF1Q5UIP0 2472 aaKnown RBP-0.53□□□□□ -2.49
PTPN4-205ENST00000433888 CFAP46Q8IYW2 2715 aa-0.54□□□□□ -2.5
PTPN4-205ENST00000433888 SMIM31A0A1B0GVY4 71 aa-0.54□□□□□ -2.5
PTPN4-205ENST00000433888 SMIM27A0A1W2PRY6 76 aa-0.54□□□□□ -2.5
PTPN4-205ENST00000433888 TMEM167BQ9NRX6 74 aa-0.54□□□□□ -2.5
PTPN4-205ENST00000433888 LRBAP50851 2863 aa-0.55□□□□□ -2.5
PTPN4-205ENST00000433888 DEFB1P60022 68 aa-0.55□□□□□ -2.5
PTPN4-205ENST00000433888 KRTAP19-5Q3LI72 72 aa-0.55□□□□□ -2.5
PTPN4-205ENST00000433888 SMIM5Q71RC9 77 aa-0.55□□□□□ -2.5
PTPN4-205ENST00000433888 DMXL2Q8TDJ6 3036 aa-0.55□□□□□ -2.5
PTPN4-205ENST00000433888 ADGRG4Q8IZF6 3080 aa-0.56□□□□□ -2.5
PTPN4-205ENST00000433888 CLPSL2Q6UWE3 100 aa-0.56□□□□□ -2.5
PTPN4-205ENST00000433888 M0QY20 66 aa-0.57□□□□□ -2.5
PTPN4-205ENST00000433888 SMR3BP02814 79 aaPredicted RBP-0.57□□□□□ -2.5
PTPN4-205ENST00000433888 MAST1Q9Y2H9 1570 aa-0.57□□□□□ -2.5
PTPN4-205ENST00000433888 BOD1L1Q8NFC6 3051 aa-0.58□□□□□ -2.5
PTPN4-205ENST00000433888 FAM208AQ9UK61 1670 aaKnown RBP-0.58□□□□□ -2.5
PTPN4-205ENST00000433888 PRXQ9BXM0 1461 aa-0.58□□□□□ -2.5
PTPN4-205ENST00000433888 TFF3Q07654 80 aa-0.58□□□□□ -2.5
PTPN4-205ENST00000433888 MGAQ8IWI9 3026 aa-0.58□□□□□ -2.5
PTPN4-205ENST00000433888 CRYBG3Q68DQ2 2970 aa-0.58□□□□□ -2.5
PTPN4-205ENST00000433888 ATMQ13315 3056 aa-0.58□□□□□ -2.5
PTPN4-205ENST00000433888 ABCA10Q8WWZ4 1543 aa-0.59□□□□□ -2.5
PTPN4-205ENST00000433888 MROH2AA6NES4 1674 aa-0.59□□□□□ -2.5
PTPN4-205ENST00000433888 ITPR2Q14571 2701 aa-0.59□□□□□ -2.5
PTPN4-205ENST00000433888 MYO9AB2RTY4 2548 aa-0.6□□□□□ -2.5
PTPN4-205ENST00000433888 TLN2Q9Y4G6 2542 aa-0.6□□□□□ -2.5
PTPN4-205ENST00000433888 H0YGX0 51 aa-0.61□□□□□ -2.51
PTPN4-205ENST00000433888 AGLP35573 1532 aa-0.61□□□□□ -2.51
PTPN4-205ENST00000433888 CSMD2Q7Z408 3487 aa-0.62□□□□□ -2.51
PTPN4-205ENST00000433888 PRUNE2Q8WUY3 3088 aa-0.63□□□□□ -2.51
PTPN4-205ENST00000433888 MT1HP80294 61 aa-0.63□□□□□ -2.51
PTPN4-205ENST00000433888 CFAP54Q96N23 3096 aa-0.63□□□□□ -2.51
PTPN4-205ENST00000433888 FREM2Q5SZK8 3169 aa-0.64□□□□□ -2.51
PTPN4-205ENST00000433888 KRTAP8-1Q8IUC2 63 aa-0.64□□□□□ -2.51
PTPN4-205ENST00000433888 ZFHX4Q86UP3 3567 aa-0.64□□□□□ -2.51
PTPN4-205ENST00000433888 LMO7Q8WWI1 1683 aa-0.65□□□□□ -2.51
PTPN4-205ENST00000433888 M0QZ58 72 aa-0.65□□□□□ -2.51
PTPN4-205ENST00000433888 WDFY3Q8IZQ1 3526 aa-0.65□□□□□ -2.51
PTPN4-205ENST00000433888 TLN1Q9Y490 2541 aaKnown RBP-0.65□□□□□ -2.51
PTPN4-205ENST00000433888 SPTAN1Q13813 2472 aaKnown RBP-0.65□□□□□ -2.51
PTPN4-205ENST00000433888 KIF21BO75037 1637 aa-0.66□□□□□ -2.51
PTPN4-205ENST00000433888 A8MTW9 85 aa-0.67□□□□□ -2.52
PTPN4-205ENST00000433888 PREX2Q70Z35 1606 aa-0.67□□□□□ -2.52
PTPN4-205ENST00000433888 VPS13CQ709C8 3753 aa-0.68□□□□□ -2.52
PTPN4-205ENST00000433888 SPEGQ15772 3267 aa-0.68□□□□□ -2.52
PTPN4-205ENST00000433888 SPART-AS1P0CW21 52 aa-0.68□□□□□ -2.52
PTPN4-205ENST00000433888 SZT2Q5T011 3432 aa-0.68□□□□□ -2.52
PTPN4-205ENST00000433888 MYO15AQ9UKN7 3530 aa-0.69□□□□□ -2.52
PTPN4-205ENST00000433888 PLNP26678 52 aa-0.69□□□□□ -2.52
PTPN4-205ENST00000433888 DDX60Q8IY21 1712 aaKnown RBP-0.69□□□□□ -2.52
PTPN4-205ENST00000433888 FRYLO94915 3013 aa-0.7□□□□□ -2.52
PTPN4-205ENST00000433888 ERICH3Q5RHP9 1530 aa-0.7□□□□□ -2.52
PTPN4-205ENST00000433888 DMDP11532 3685 aa-0.71□□□□□ -2.52
PTPN4-205ENST00000433888 MT1XP80297 61 aa-0.71□□□□□ -2.52
PTPN4-205ENST00000433888 POLR2KP53803 58 aaKnown RBP-0.72□□□□□ -2.52
PTPN4-205ENST00000433888 SYCP2Q9BX26 1530 aa-0.73□□□□□ -2.53
PTPN4-205ENST00000433888 KRTAP20-1Q3LI63 56 aa-0.73□□□□□ -2.53
PTPN4-205ENST00000433888 PCNTO95613 3336 aa-0.73□□□□□ -2.53
PTPN4-205ENST00000433888 IQGAP1P46940 1657 aa-0.74□□□□□ -2.53
PTPN4-205ENST00000433888 LINC01546A6NGU7 62 aa-0.74□□□□□ -2.53
PTPN4-205ENST00000433888 SMIM2Q9BVW6 85 aa-0.75□□□□□ -2.53
PTPN4-205ENST00000433888 WDFY4Q6ZS81 3184 aa-0.75□□□□□ -2.53
PTPN4-205ENST00000433888 NRXN3Q9Y4C0 1643 aa-0.77□□□□□ -2.53
PTPN4-205ENST00000433888 MT1GP13640 62 aa-0.77□□□□□ -2.53
PTPN4-205ENST00000433888 DEFB131AP59861 70 aa-0.77□□□□□ -2.53
PTPN4-205ENST00000433888 CMC2Q9NRP2 79 aa-0.77□□□□□ -2.53
PTPN4-205ENST00000433888 MKI67P46013 3256 aaKnown RBP-0.77□□□□□ -2.53
PTPN4-205ENST00000433888 CEP350Q5VT06 3117 aa-0.78□□□□□ -2.53
PTPN4-205ENST00000433888 ABCA5Q8WWZ7 1642 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms