RNA–Protein interactions for RNA: ENST00000429280.1

SKP1P3-201, Transcript of S-phase kinase associated protein 1 pseudogene 3, humanhuman

BASIC

Gene SKP1P3, Length 487 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P3-201ENST00000429280 LYSTQ99698 3801 aa2.57□□□□□ -2
SKP1P3-201ENST00000429280 DNAH6Q9C0G6 4158 aa2.57□□□□□ -2
SKP1P3-201ENST00000429280 DNAH7Q8WXX0 4024 aa2.56□□□□□ -2
SKP1P3-201ENST00000429280 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
SKP1P3-201ENST00000429280 Q6ZSA8 131 aa2.56□□□□□ -2
SKP1P3-201ENST00000429280 PRKDCP78527 4128 aaKnown RBP2.55□□□□□ -2
SKP1P3-201ENST00000429280 FBN3Q75N90 2809 aa2.55□□□□□ -2
SKP1P3-201ENST00000429280 PLECQ15149 4684 aaKnown RBP2.54□□□□□ -2
SKP1P3-201ENST00000429280 Q5W150 140 aa2.54□□□□□ -2
SKP1P3-201ENST00000429280 HECTD4Q9Y4D8 3996 aa2.54□□□□□ -2
SKP1P3-201ENST00000429280 RPS29P62273 56 aaKnown RBP2.53□□□□□ -2
SKP1P3-201ENST00000429280 MEGF8Q7Z7M0 2845 aa2.52□□□□□ -2.01
SKP1P3-201ENST00000429280 A8MUU9 505 aa2.52□□□□□ -2.01
SKP1P3-201ENST00000429280 KRTAP13-2Q52LG2 175 aa2.52□□□□□ -2.01
SKP1P3-201ENST00000429280 CIRBP-AS1Q8TBR5 109 aa2.52□□□□□ -2.01
SKP1P3-201ENST00000429280 DNAH8Q96JB1 4490 aa2.51□□□□□ -2.01
SKP1P3-201ENST00000429280 K7ERS5 55 aa2.51□□□□□ -2.01
SKP1P3-201ENST00000429280 LY6G6CO95867 125 aa2.51□□□□□ -2.01
SKP1P3-201ENST00000429280 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
SKP1P3-201ENST00000429280 DNAH2Q9P225 4427 aa2.5□□□□□ -2.01
SKP1P3-201ENST00000429280 SPINK1P00995 79 aa2.5□□□□□ -2.01
SKP1P3-201ENST00000429280 SPINK6Q6UWN8 80 aa2.5□□□□□ -2.01
SKP1P3-201ENST00000429280 ALMS1Q8TCU4 4167 aa2.5□□□□□ -2.01
SKP1P3-201ENST00000429280 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
SKP1P3-201ENST00000429280 KRTAP10-1P60331 282 aa2.48□□□□□ -2.01
SKP1P3-201ENST00000429280 TGP01266 2768 aa2.48□□□□□ -2.01
SKP1P3-201ENST00000429280 P0C880 135 aa2.47□□□□□ -2.01
SKP1P3-201ENST00000429280 LINC00304Q8N9R0 145 aa2.47□□□□□ -2.01
SKP1P3-201ENST00000429280 KRTAP21-3Q3LHN1 58 aa2.46□□□□□ -2.02
SKP1P3-201ENST00000429280 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
SKP1P3-201ENST00000429280 DNAH11Q96DT5 4516 aa2.45□□□□□ -2.02
SKP1P3-201ENST00000429280 FRAS1Q86XX4 4008 aa2.44□□□□□ -2.02
SKP1P3-201ENST00000429280 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
SKP1P3-201ENST00000429280 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
SKP1P3-201ENST00000429280 PKD1P98161 4303 aa2.43□□□□□ -2.02
SKP1P3-201ENST00000429280 KMT2AQ03164 3969 aa2.43□□□□□ -2.02
SKP1P3-201ENST00000429280 DNAH5Q8TE73 4624 aa2.43□□□□□ -2.02
SKP1P3-201ENST00000429280 A0A1B0GU33 70 aa2.42□□□□□ -2.02
SKP1P3-201ENST00000429280 H0YAA0 97 aa2.42□□□□□ -2.02
SKP1P3-201ENST00000429280 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
SKP1P3-201ENST00000429280 COX6B2Q6YFQ2 88 aa2.41□□□□□ -2.02
SKP1P3-201ENST00000429280 SACSQ9NZJ4 4579 aa2.4□□□□□ -2.02
SKP1P3-201ENST00000429280 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
SKP1P3-201ENST00000429280 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
SKP1P3-201ENST00000429280 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SKP1P3-201ENST00000429280 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
SKP1P3-201ENST00000429280 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
SKP1P3-201ENST00000429280 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
SKP1P3-201ENST00000429280 VPS13BQ7Z7G8 4022 aa2.36□□□□□ -2.03
SKP1P3-201ENST00000429280 PKHD1L1Q86WI1 4243 aa2.35□□□□□ -2.03
SKP1P3-201ENST00000429280 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
SKP1P3-201ENST00000429280 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
SKP1P3-201ENST00000429280 RPL37P61927 97 aaKnown RBP2.34□□□□□ -2.03
SKP1P3-201ENST00000429280 DNHD1Q96M86 4753 aa2.33□□□□□ -2.04
SKP1P3-201ENST00000429280 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
SKP1P3-201ENST00000429280 FLG2Q5D862 2391 aaPredicted RBP2.31□□□□□ -2.04
SKP1P3-201ENST00000429280 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
SKP1P3-201ENST00000429280 KRTAP10-8P60410 259 aa2.31□□□□□ -2.04
SKP1P3-201ENST00000429280 TPRXLQ17RH7 258 aa2.31□□□□□ -2.04
SKP1P3-201ENST00000429280 DYNC1H1Q14204 4646 aaKnown RBP2.3□□□□□ -2.04
SKP1P3-201ENST00000429280 C9orf92A6NGG3 77 aa2.3□□□□□ -2.04
SKP1P3-201ENST00000429280 HYDINQ4G0P3 5121 aa2.29□□□□□ -2.04
SKP1P3-201ENST00000429280 SMR3BP02814 79 aaPredicted RBP2.28□□□□□ -2.04
SKP1P3-201ENST00000429280 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
SKP1P3-201ENST00000429280 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
SKP1P3-201ENST00000429280 TNXBP22105 4242 aa2.26□□□□□ -2.05
SKP1P3-201ENST00000429280 S4R3F8 94 aa2.23□□□□□ -2.05
SKP1P3-201ENST00000429280 FAT1Q14517 4588 aa2.22□□□□□ -2.05
SKP1P3-201ENST00000429280 Q5VSD8 79 aa2.22□□□□□ -2.05
SKP1P3-201ENST00000429280 RYR2Q92736 4967 aa2.22□□□□□ -2.05
SKP1P3-201ENST00000429280 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
SKP1P3-201ENST00000429280 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
SKP1P3-201ENST00000429280 FAT3Q8TDW7 4589 aa2.21□□□□□ -2.06
SKP1P3-201ENST00000429280 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
SKP1P3-201ENST00000429280 C10orf95Q9H7T3 257 aa2.21□□□□□ -2.06
SKP1P3-201ENST00000429280 HSPG2P98160 4391 aa2.21□□□□□ -2.06
SKP1P3-201ENST00000429280 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
SKP1P3-201ENST00000429280 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
SKP1P3-201ENST00000429280 A0A0D9SG42 100 aa2.18□□□□□ -2.06
SKP1P3-201ENST00000429280 M0QZ58 72 aa2.18□□□□□ -2.06
SKP1P3-201ENST00000429280 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
SKP1P3-201ENST00000429280 DMBT1Q9UGM3 2413 aaPredicted RBP2.15□□□□□ -2.07
SKP1P3-201ENST00000429280 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
SKP1P3-201ENST00000429280 RYR1P21817 5038 aa2.14□□□□□ -2.07
SKP1P3-201ENST00000429280 KRTAP12-1P59990 96 aa2.14□□□□□ -2.07
SKP1P3-201ENST00000429280 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
SKP1P3-201ENST00000429280 PRO2289Q9P1D8 64 aa2.12□□□□□ -2.07
SKP1P3-201ENST00000429280 MYCBP2O75592 4640 aa2.12□□□□□ -2.07
SKP1P3-201ENST00000429280 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
SKP1P3-201ENST00000429280 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
SKP1P3-201ENST00000429280 R4GN34 69 aa2.09□□□□□ -2.07
SKP1P3-201ENST00000429280 INE1O15225 51 aa2.08□□□□□ -2.08
SKP1P3-201ENST00000429280 RYR3Q15413 4870 aa2.06□□□□□ -2.08
SKP1P3-201ENST00000429280 KRTAP19-2Q3LHN2 52 aa2.06□□□□□ -2.08
SKP1P3-201ENST00000429280 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
SKP1P3-201ENST00000429280 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
SKP1P3-201ENST00000429280 LRP2P98164 4655 aa2.03□□□□□ -2.08
SKP1P3-201ENST00000429280 KRTAP4-1Q9BYQ7 146 aa2.01□□□□□ -2.09
SKP1P3-201ENST00000429280 MUC17Q685J3 4493 aa2□□□□□ -2.09
SKP1P3-201ENST00000429280 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms