RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
TRAPPC10-203ENST00000422875 INE1O15225 51 aa7.57□□□□□ -1.2
TRAPPC10-203ENST00000422875 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
TRAPPC10-203ENST00000422875 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
TRAPPC10-203ENST00000422875 DNAH9Q9NYC9 4486 aa7.5□□□□□ -1.21
TRAPPC10-203ENST00000422875 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
TRAPPC10-203ENST00000422875 PLECQ15149 4684 aaKnown RBP7.49□□□□□ -1.21
TRAPPC10-203ENST00000422875 FAT1Q14517 4588 aa7.47□□□□□ -1.21
TRAPPC10-203ENST00000422875 DNAH1Q9P2D7 4330 aa7.45□□□□□ -1.22
TRAPPC10-203ENST00000422875 DNAH8Q96JB1 4490 aa7.43□□□□□ -1.22
TRAPPC10-203ENST00000422875 CRCT1Q9UGL9 99 aa7.43□□□□□ -1.22
TRAPPC10-203ENST00000422875 DNHD1Q96M86 4753 aa7.41□□□□□ -1.22
TRAPPC10-203ENST00000422875 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.23
TRAPPC10-203ENST00000422875 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
TRAPPC10-203ENST00000422875 ANK2Q01484 3957 aa7.36□□□□□ -1.23
TRAPPC10-203ENST00000422875 DNAH3Q8TD57 4116 aa7.27□□□□□ -1.25
TRAPPC10-203ENST00000422875 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
TRAPPC10-203ENST00000422875 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
TRAPPC10-203ENST00000422875 LRP1BQ9NZR2 4599 aa7.2□□□□□ -1.26
TRAPPC10-203ENST00000422875 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
TRAPPC10-203ENST00000422875 DNAH17Q9UFH2 4485 aa7.18□□□□□ -1.26
TRAPPC10-203ENST00000422875 RYR1P21817 5038 aa7.18□□□□□ -1.26
TRAPPC10-203ENST00000422875 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
TRAPPC10-203ENST00000422875 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
TRAPPC10-203ENST00000422875 STARD9Q9P2P6 4700 aa7.14□□□□□ -1.27
TRAPPC10-203ENST00000422875 ALMS1Q8TCU4 4167 aa7.1□□□□□ -1.27
TRAPPC10-203ENST00000422875 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
TRAPPC10-203ENST00000422875 LYSTQ99698 3801 aa7.04□□□□□ -1.28
TRAPPC10-203ENST00000422875 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
TRAPPC10-203ENST00000422875 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
TRAPPC10-203ENST00000422875 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
TRAPPC10-203ENST00000422875 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
TRAPPC10-203ENST00000422875 PRKDCP78527 4128 aaKnown RBP6.94□□□□□ -1.3
TRAPPC10-203ENST00000422875 FRAS1Q86XX4 4008 aa6.91□□□□□ -1.3
TRAPPC10-203ENST00000422875 KIAA1109Q2LD37 5005 aa6.91□□□□□ -1.3
TRAPPC10-203ENST00000422875 VPS13BQ7Z7G8 4022 aa6.91□□□□□ -1.3
TRAPPC10-203ENST00000422875 MT2AP02795 61 aa6.89□□□□□ -1.31
TRAPPC10-203ENST00000422875 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
TRAPPC10-203ENST00000422875 MT1HP80294 61 aa6.87□□□□□ -1.31
TRAPPC10-203ENST00000422875 DNAH7Q8WXX0 4024 aa6.86□□□□□ -1.31
TRAPPC10-203ENST00000422875 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
TRAPPC10-203ENST00000422875 FAT3Q8TDW7 4589 aa6.85□□□□□ -1.31
TRAPPC10-203ENST00000422875 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
TRAPPC10-203ENST00000422875 MT1FP04733 61 aa6.79□□□□□ -1.32
TRAPPC10-203ENST00000422875 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
TRAPPC10-203ENST00000422875 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
TRAPPC10-203ENST00000422875 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
TRAPPC10-203ENST00000422875 RYR3Q15413 4870 aa6.66□□□□□ -1.34
TRAPPC10-203ENST00000422875 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
TRAPPC10-203ENST00000422875 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
TRAPPC10-203ENST00000422875 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
TRAPPC10-203ENST00000422875 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
TRAPPC10-203ENST00000422875 LRP2P98164 4655 aa6.57□□□□□ -1.36
TRAPPC10-203ENST00000422875 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC10-203ENST00000422875 HYDINQ4G0P3 5121 aa6.4□□□□□ -1.38
TRAPPC10-203ENST00000422875 PKHD1P08F94 4074 aa6.4□□□□□ -1.39
TRAPPC10-203ENST00000422875 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
TRAPPC10-203ENST00000422875 RYR2Q92736 4967 aa6.35□□□□□ -1.39
TRAPPC10-203ENST00000422875 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
TRAPPC10-203ENST00000422875 MT1XP80297 61 aa6.34□□□□□ -1.4
TRAPPC10-203ENST00000422875 HERC2O95714 4834 aa6.32□□□□□ -1.4
TRAPPC10-203ENST00000422875 PKD1P98161 4303 aa6.31□□□□□ -1.4
TRAPPC10-203ENST00000422875 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
TRAPPC10-203ENST00000422875 MT1BP07438 61 aa6.26□□□□□ -1.41
TRAPPC10-203ENST00000422875 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.41
TRAPPC10-203ENST00000422875 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
TRAPPC10-203ENST00000422875 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
TRAPPC10-203ENST00000422875 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
TRAPPC10-203ENST00000422875 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
TRAPPC10-203ENST00000422875 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
TRAPPC10-203ENST00000422875 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.42
TRAPPC10-203ENST00000422875 LPAP08519 4548 aa6.13□□□□□ -1.43
TRAPPC10-203ENST00000422875 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
TRAPPC10-203ENST00000422875 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
TRAPPC10-203ENST00000422875 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
TRAPPC10-203ENST00000422875 HSPG2P98160 4391 aa6.1□□□□□ -1.43
TRAPPC10-203ENST00000422875 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
TRAPPC10-203ENST00000422875 MT1GP13640 62 aa6.07□□□□□ -1.44
TRAPPC10-203ENST00000422875 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
TRAPPC10-203ENST00000422875 HERC1Q15751 4861 aa5.94□□□□□ -1.46
TRAPPC10-203ENST00000422875 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
TRAPPC10-203ENST00000422875 EPPK1P58107 5090 aaKnown RBP5.91□□□□□ -1.46
TRAPPC10-203ENST00000422875 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
TRAPPC10-203ENST00000422875 KRTAP19-2Q3LHN2 52 aa5.9□□□□□ -1.47
TRAPPC10-203ENST00000422875 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
TRAPPC10-203ENST00000422875 BIRC6Q9NR09 4857 aa5.85□□□□□ -1.47
TRAPPC10-203ENST00000422875 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.47
TRAPPC10-203ENST00000422875 TNXBP22105 4242 aa5.84□□□□□ -1.48
TRAPPC10-203ENST00000422875 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
TRAPPC10-203ENST00000422875 SPRR2EP22531 72 aa5.77□□□□□ -1.49
TRAPPC10-203ENST00000422875 SPRR2BP35325 72 aa5.77□□□□□ -1.49
TRAPPC10-203ENST00000422875 SPRR2AP35326 72 aa5.77□□□□□ -1.49
TRAPPC10-203ENST00000422875 LCE2BO14633 110 aa5.75□□□□□ -1.49
TRAPPC10-203ENST00000422875 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
TRAPPC10-203ENST00000422875 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC10-203ENST00000422875 MT1LQ93083 61 aa5.72□□□□□ -1.49
TRAPPC10-203ENST00000422875 LCE3EQ5T5B0 92 aa5.65□□□□□ -1.5
TRAPPC10-203ENST00000422875 MT1EP04732 61 aa5.65□□□□□ -1.51
TRAPPC10-203ENST00000422875 OBSCNQ5VST9 7968 aa5.64□□□□□ -1.51
TRAPPC10-203ENST00000422875 MUC2Q02817 5179 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms