RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
TRAPPC10-203ENST00000422875 SUPT5HO00267 1087 aaKnown RBP29.22■■■□□ 2.27
TRAPPC10-203ENST00000422875 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
TRAPPC10-203ENST00000422875 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
TRAPPC10-203ENST00000422875 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
TRAPPC10-203ENST00000422875 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
TRAPPC10-203ENST00000422875 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
TRAPPC10-203ENST00000422875 PELP1Q8IZL8 1130 aaKnown RBP27.46■■□□□ 1.99
TRAPPC10-203ENST00000422875 TTBK1Q5TCY1 1321 aaPredicted RBP27.38■■□□□ 1.97
TRAPPC10-203ENST00000422875 APLP2Q06481 763 aa27.17■■□□□ 1.94
TRAPPC10-203ENST00000422875 CENPBP07199 599 aaPredicted RBP27■■□□□ 1.91
TRAPPC10-203ENST00000422875 ZEB1P37275 1124 aaPredicted RBP26.96■■□□□ 1.91
TRAPPC10-203ENST00000422875 CCER1Q8TC90 406 aaPredicted RBP26.95■■□□□ 1.9
TRAPPC10-203ENST00000422875 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
TRAPPC10-203ENST00000422875 RANGAP1P46060 587 aaPredicted RBP26.75■■□□□ 1.87
TRAPPC10-203ENST00000422875 HRCP23327 699 aa26.66■■□□□ 1.86
TRAPPC10-203ENST00000422875 YTHDC1Q96MU7 727 aaKnown RBP26.65■■□□□ 1.86
TRAPPC10-203ENST00000422875 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
TRAPPC10-203ENST00000422875 ERICH6Q7L0X2 663 aa26.47■■□□□ 1.83
TRAPPC10-203ENST00000422875 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
TRAPPC10-203ENST00000422875 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
TRAPPC10-203ENST00000422875 LOC105371045A0A1W2PR82 267 aa26.36■■□□□ 1.81
TRAPPC10-203ENST00000422875 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
TRAPPC10-203ENST00000422875 ATP1B4Q9UN42 357 aaPredicted RBP26.23■■□□□ 1.79
TRAPPC10-203ENST00000422875 MYT1Q01538 1121 aa26.21■■□□□ 1.79
TRAPPC10-203ENST00000422875 NEFLP07196 543 aa26.15■■□□□ 1.78
TRAPPC10-203ENST00000422875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.81■■□□□ 1.72
TRAPPC10-203ENST00000422875 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
TRAPPC10-203ENST00000422875 ITGAEP38570 1179 aa25.77■■□□□ 1.72
TRAPPC10-203ENST00000422875 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
TRAPPC10-203ENST00000422875 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
TRAPPC10-203ENST00000422875 CNGB1Q14028 1251 aaPredicted RBP25.43■■□□□ 1.66
TRAPPC10-203ENST00000422875 POLR3GLQ9BT43 218 aa25.42■■□□□ 1.66
TRAPPC10-203ENST00000422875 BCANQ96GW7 911 aa25.19■■□□□ 1.62
TRAPPC10-203ENST00000422875 DAXXQ9UER7 740 aaPredicted RBP25.19■■□□□ 1.62
TRAPPC10-203ENST00000422875 ACIN1Q9UKV3 1341 aaKnown RBP25.07■■□□□ 1.6
TRAPPC10-203ENST00000422875 ZNF316A6NFI3 1004 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC10-203ENST00000422875 NEUROD1Q13562 356 aa24.97■■□□□ 1.59
TRAPPC10-203ENST00000422875 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
TRAPPC10-203ENST00000422875 RTL5Q5HYW3 569 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC10-203ENST00000422875 MYT1LQ9UL68 1186 aa24.77■■□□□ 1.56
TRAPPC10-203ENST00000422875 ANP32CO43423 234 aa24.73■■□□□ 1.55
TRAPPC10-203ENST00000422875 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
TRAPPC10-203ENST00000422875 TRIM52Q96A61 297 aa24.71■■□□□ 1.55
TRAPPC10-203ENST00000422875 CDK11AQ9UQ88 783 aaPredicted RBP24.67■■□□□ 1.54
TRAPPC10-203ENST00000422875 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
TRAPPC10-203ENST00000422875 SLC4A1APQ9BWU0 796 aaKnown RBP24.58■■□□□ 1.53
TRAPPC10-203ENST00000422875 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
TRAPPC10-203ENST00000422875 ZNF326Q5BKZ1 582 aaKnown RBP24.55■■□□□ 1.52
TRAPPC10-203ENST00000422875 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
TRAPPC10-203ENST00000422875 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
TRAPPC10-203ENST00000422875 FKBP8Q14318 412 aa24.44■■□□□ 1.5
TRAPPC10-203ENST00000422875 ABCC9O60706 1549 aa24.39■■□□□ 1.49
TRAPPC10-203ENST00000422875 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
TRAPPC10-203ENST00000422875 DDX10Q13206 875 aaKnown RBP24.28■■□□□ 1.48
TRAPPC10-203ENST00000422875 MIER1Q8N108 512 aa24.26■■□□□ 1.47
TRAPPC10-203ENST00000422875 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
TRAPPC10-203ENST00000422875 ANP32AP39687 249 aaKnown RBP24.22■■□□□ 1.47
TRAPPC10-203ENST00000422875 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
TRAPPC10-203ENST00000422875 ARID3CA6NKF2 412 aa24.2■■□□□ 1.47
TRAPPC10-203ENST00000422875 HNRNPUQ00839 825 aaKnown RBP eCLIP24.2■■□□□ 1.463e-10■■□□□ 11.7
TRAPPC10-203ENST00000422875 BCL11AQ9H165 835 aa24.11■■□□□ 1.45
TRAPPC10-203ENST00000422875 FAM9BQ8IZU0 186 aa24.07■■□□□ 1.44
TRAPPC10-203ENST00000422875 CANXP27824 592 aaKnown RBP24.04■■□□□ 1.44
TRAPPC10-203ENST00000422875 TONSLQ96HA7 1378 aa24.02■■□□□ 1.44
TRAPPC10-203ENST00000422875 EIF5BO60841 1220 aaKnown RBP24■■□□□ 1.43
TRAPPC10-203ENST00000422875 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
TRAPPC10-203ENST00000422875 IRX6P78412 446 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC10-203ENST00000422875 NBR1Q14596 966 aa23.97■■□□□ 1.43
TRAPPC10-203ENST00000422875 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
TRAPPC10-203ENST00000422875 FBLN2P98095 1184 aa23.95■■□□□ 1.42
TRAPPC10-203ENST00000422875 ZNF777Q9ULD5 760 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC10-203ENST00000422875 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
TRAPPC10-203ENST00000422875 ZBTB47Q9UFB7 747 aaPredicted RBP23.89■■□□□ 1.41
TRAPPC10-203ENST00000422875 CCDC136Q96JN2 1154 aa23.86■■□□□ 1.41
TRAPPC10-203ENST00000422875 CHIC2Q9UKJ5 165 aa23.8■■□□□ 1.4
TRAPPC10-203ENST00000422875 MRS2Q9HD23 443 aa23.79■■□□□ 1.4
TRAPPC10-203ENST00000422875 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
TRAPPC10-203ENST00000422875 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
TRAPPC10-203ENST00000422875 SLC24A1O60721 1099 aa23.67■■□□□ 1.38
TRAPPC10-203ENST00000422875 CLIP1P30622 1438 aa23.66■■□□□ 1.38
TRAPPC10-203ENST00000422875 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
TRAPPC10-203ENST00000422875 ARXQ96QS3 562 aa23.64■■□□□ 1.37
TRAPPC10-203ENST00000422875 SENP3-EIF4A1A0A087X0R7 540 aa23.64■■□□□ 1.37
TRAPPC10-203ENST00000422875 NEFMP07197 916 aa23.62■■□□□ 1.37
TRAPPC10-203ENST00000422875 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
TRAPPC10-203ENST00000422875 HSP90AA1P07900 732 aaKnown RBP23.59■■□□□ 1.37
TRAPPC10-203ENST00000422875 SUPT16HQ9Y5B9 1047 aaKnown RBP23.56■■□□□ 1.36
TRAPPC10-203ENST00000422875 UPF2Q9HAU5 1272 aaKnown RBP23.56■■□□□ 1.36
TRAPPC10-203ENST00000422875 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
TRAPPC10-203ENST00000422875 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
TRAPPC10-203ENST00000422875 EIF4G2P78344 907 aaKnown RBP eCLIP23.51■■□□□ 1.353e-7■■■■■ 29.3
TRAPPC10-203ENST00000422875 ANP32BQ92688 251 aaKnown RBP23.48■■□□□ 1.35
TRAPPC10-203ENST00000422875 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
TRAPPC10-203ENST00000422875 RRP7BPQ9NSQ0 103 aa23.47■■□□□ 1.35
TRAPPC10-203ENST00000422875 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
TRAPPC10-203ENST00000422875 MTUS2Q5JR59 1369 aa23.45■■□□□ 1.34
TRAPPC10-203ENST00000422875 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.43■■□□□ 1.34
TRAPPC10-203ENST00000422875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.34
TRAPPC10-203ENST00000422875 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms