RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
CRTC3-202ENST00000420329 VPS13DQ5THJ4 4388 aa7.49□□□□□ -1.21
CRTC3-202ENST00000420329 DNAH17Q9UFH2 4485 aa7.49□□□□□ -1.21
CRTC3-202ENST00000420329 ALMS1Q8TCU4 4167 aa7.45□□□□□ -1.22
CRTC3-202ENST00000420329 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.22
CRTC3-202ENST00000420329 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
CRTC3-202ENST00000420329 DNAH8Q96JB1 4490 aa7.36□□□□□ -1.23
CRTC3-202ENST00000420329 DNHD1Q96M86 4753 aa7.32□□□□□ -1.24
CRTC3-202ENST00000420329 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
CRTC3-202ENST00000420329 DNAH2Q9P225 4427 aa7.32□□□□□ -1.24
CRTC3-202ENST00000420329 LRP1BQ9NZR2 4599 aa7.29□□□□□ -1.24
CRTC3-202ENST00000420329 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
CRTC3-202ENST00000420329 FAT1Q14517 4588 aa7.28□□□□□ -1.24
CRTC3-202ENST00000420329 DYNC1H1Q14204 4646 aaKnown RBP7.25□□□□□ -1.25
CRTC3-202ENST00000420329 ANK2Q01484 3957 aa7.19□□□□□ -1.26
CRTC3-202ENST00000420329 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
CRTC3-202ENST00000420329 KMT2AQ03164 3969 aa7.16□□□□□ -1.26
CRTC3-202ENST00000420329 SACSQ9NZJ4 4579 aa7.12□□□□□ -1.27
CRTC3-202ENST00000420329 DYNC2H1Q8NCM8 4307 aaKnown RBP7.11□□□□□ -1.27
CRTC3-202ENST00000420329 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
CRTC3-202ENST00000420329 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
CRTC3-202ENST00000420329 VPS13BQ7Z7G8 4022 aa7.04□□□□□ -1.28
CRTC3-202ENST00000420329 FRAS1Q86XX4 4008 aa7.03□□□□□ -1.28
CRTC3-202ENST00000420329 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
CRTC3-202ENST00000420329 LCE3AQ5TA76 89 aa7□□□□□ -1.29
CRTC3-202ENST00000420329 LYSTQ99698 3801 aa7□□□□□ -1.29
CRTC3-202ENST00000420329 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
CRTC3-202ENST00000420329 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.29
CRTC3-202ENST00000420329 RYR1P21817 5038 aa6.95□□□□□ -1.3
CRTC3-202ENST00000420329 KRTAP12-3P60328 96 aa6.95□□□□□ -1.3
CRTC3-202ENST00000420329 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
CRTC3-202ENST00000420329 INE1O15225 51 aa6.94□□□□□ -1.3
CRTC3-202ENST00000420329 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
CRTC3-202ENST00000420329 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
CRTC3-202ENST00000420329 DNAH6Q9C0G6 4158 aa6.88□□□□□ -1.31
CRTC3-202ENST00000420329 DNAH7Q8WXX0 4024 aa6.84□□□□□ -1.31
CRTC3-202ENST00000420329 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
CRTC3-202ENST00000420329 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
CRTC3-202ENST00000420329 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
CRTC3-202ENST00000420329 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.35
CRTC3-202ENST00000420329 RYR3Q15413 4870 aa6.63□□□□□ -1.35
CRTC3-202ENST00000420329 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
CRTC3-202ENST00000420329 MT1HP80294 61 aa6.62□□□□□ -1.35
CRTC3-202ENST00000420329 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
CRTC3-202ENST00000420329 MT2AP02795 61 aa6.59□□□□□ -1.35
CRTC3-202ENST00000420329 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
CRTC3-202ENST00000420329 MT1FP04733 61 aa6.51□□□□□ -1.37
CRTC3-202ENST00000420329 PKHD1P08F94 4074 aa6.51□□□□□ -1.37
CRTC3-202ENST00000420329 RYR2Q92736 4967 aa6.51□□□□□ -1.37
CRTC3-202ENST00000420329 LRP2P98164 4655 aa6.46□□□□□ -1.38
CRTC3-202ENST00000420329 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.39
CRTC3-202ENST00000420329 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
CRTC3-202ENST00000420329 PKD1P98161 4303 aa6.34□□□□□ -1.39
CRTC3-202ENST00000420329 HSPG2P98160 4391 aa6.32□□□□□ -1.4
CRTC3-202ENST00000420329 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
CRTC3-202ENST00000420329 KMT2CQ8NEZ4 4911 aaKnown RBP6.25□□□□□ -1.41
CRTC3-202ENST00000420329 HERC2O95714 4834 aa6.24□□□□□ -1.41
CRTC3-202ENST00000420329 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
CRTC3-202ENST00000420329 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
CRTC3-202ENST00000420329 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
CRTC3-202ENST00000420329 LPAP08519 4548 aa6.17□□□□□ -1.42
CRTC3-202ENST00000420329 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
CRTC3-202ENST00000420329 PKHD1L1Q86WI1 4243 aa6.17□□□□□ -1.42
CRTC3-202ENST00000420329 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
CRTC3-202ENST00000420329 MT1XP80297 61 aa6.12□□□□□ -1.43
CRTC3-202ENST00000420329 TNXBP22105 4242 aa6.1□□□□□ -1.43
CRTC3-202ENST00000420329 MT1BP07438 61 aa6.07□□□□□ -1.44
CRTC3-202ENST00000420329 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
CRTC3-202ENST00000420329 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
CRTC3-202ENST00000420329 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
CRTC3-202ENST00000420329 HERC1Q15751 4861 aa5.96□□□□□ -1.46
CRTC3-202ENST00000420329 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
CRTC3-202ENST00000420329 PCLOQ9Y6V0 5065 aa5.91□□□□□ -1.46
CRTC3-202ENST00000420329 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
CRTC3-202ENST00000420329 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
CRTC3-202ENST00000420329 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
CRTC3-202ENST00000420329 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
CRTC3-202ENST00000420329 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
CRTC3-202ENST00000420329 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
CRTC3-202ENST00000420329 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
CRTC3-202ENST00000420329 ABCA13Q86UQ4 5058 aa5.79□□□□□ -1.48
CRTC3-202ENST00000420329 EPPK1P58107 5090 aaKnown RBP5.77□□□□□ -1.49
CRTC3-202ENST00000420329 MT1GP13640 62 aa5.62□□□□□ -1.51
CRTC3-202ENST00000420329 LCE2BO14633 110 aa5.6□□□□□ -1.51
CRTC3-202ENST00000420329 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
CRTC3-202ENST00000420329 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
CRTC3-202ENST00000420329 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
CRTC3-202ENST00000420329 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
CRTC3-202ENST00000420329 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
CRTC3-202ENST00000420329 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
CRTC3-202ENST00000420329 MT1LQ93083 61 aa5.48□□□□□ -1.53
CRTC3-202ENST00000420329 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
CRTC3-202ENST00000420329 MT1EP04732 61 aa5.43□□□□□ -1.54
CRTC3-202ENST00000420329 MUC2Q02817 5179 aa5.42□□□□□ -1.54
CRTC3-202ENST00000420329 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
CRTC3-202ENST00000420329 SPRR2EP22531 72 aa5.31□□□□□ -1.56
CRTC3-202ENST00000420329 SPRR2BP35325 72 aa5.31□□□□□ -1.56
CRTC3-202ENST00000420329 SPRR2AP35326 72 aa5.31□□□□□ -1.56
CRTC3-202ENST00000420329 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
CRTC3-202ENST00000420329 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms