RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
CRTC3-202ENST00000420329 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
CRTC3-202ENST00000420329 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.02
CRTC3-202ENST00000420329 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
CRTC3-202ENST00000420329 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
CRTC3-202ENST00000420329 PCGF6Q9BYE7 350 aa26.3■■□□□ 1.8
CRTC3-202ENST00000420329 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
CRTC3-202ENST00000420329 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
CRTC3-202ENST00000420329 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
CRTC3-202ENST00000420329 TTBK1Q5TCY1 1321 aaPredicted RBP25.57■■□□□ 1.68
CRTC3-202ENST00000420329 APLP2Q06481 763 aa25.51■■□□□ 1.67
CRTC3-202ENST00000420329 HRCP23327 699 aa25.47■■□□□ 1.67
CRTC3-202ENST00000420329 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
CRTC3-202ENST00000420329 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
CRTC3-202ENST00000420329 CCER1Q8TC90 406 aaPredicted RBP25.35■■□□□ 1.65
CRTC3-202ENST00000420329 TRIM26Q12899 539 aaPredicted RBP25.26■■□□□ 1.63
CRTC3-202ENST00000420329 CENPBP07199 599 aaPredicted RBP25.25■■□□□ 1.63
CRTC3-202ENST00000420329 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
CRTC3-202ENST00000420329 PPARGC1BQ86YN6 1023 aaKnown RBP25.08■■□□□ 1.6
CRTC3-202ENST00000420329 RANGAP1P46060 587 aaPredicted RBP25.04■■□□□ 1.6
CRTC3-202ENST00000420329 UBTFP17480 764 aaKnown RBP25.02■■□□□ 1.6
CRTC3-202ENST00000420329 YTHDC1Q96MU7 727 aaKnown RBP24.79■■□□□ 1.56
CRTC3-202ENST00000420329 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
CRTC3-202ENST00000420329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.46■■□□□ 1.51
CRTC3-202ENST00000420329 MYT1Q01538 1121 aa24.39■■□□□ 1.5
CRTC3-202ENST00000420329 HNRNPUL2Q1KMD3 747 aaKnown RBP24.37■■□□□ 1.49
CRTC3-202ENST00000420329 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
CRTC3-202ENST00000420329 NEFLP07196 543 aa24.31■■□□□ 1.48
CRTC3-202ENST00000420329 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
CRTC3-202ENST00000420329 ITGAEP38570 1179 aa24.19■■□□□ 1.46
CRTC3-202ENST00000420329 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
CRTC3-202ENST00000420329 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
CRTC3-202ENST00000420329 ABCC9O60706 1549 aa23.97■■□□□ 1.43
CRTC3-202ENST00000420329 GTF3C3Q9Y5Q9 886 aa23.95■■□□□ 1.42
CRTC3-202ENST00000420329 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
CRTC3-202ENST00000420329 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
CRTC3-202ENST00000420329 ZNF316A6NFI3 1004 aaPredicted RBP23.78■■□□□ 1.4
CRTC3-202ENST00000420329 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
CRTC3-202ENST00000420329 CSRNP3Q8WYN3 585 aa23.67■■□□□ 1.38
CRTC3-202ENST00000420329 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
CRTC3-202ENST00000420329 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
CRTC3-202ENST00000420329 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
CRTC3-202ENST00000420329 POLR3GLQ9BT43 218 aa23.6■■□□□ 1.37
CRTC3-202ENST00000420329 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
CRTC3-202ENST00000420329 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
CRTC3-202ENST00000420329 BCANQ96GW7 911 aa23.46■■□□□ 1.35
CRTC3-202ENST00000420329 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
CRTC3-202ENST00000420329 ANP32CO43423 234 aa23.32■■□□□ 1.32
CRTC3-202ENST00000420329 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
CRTC3-202ENST00000420329 TRIM52Q96A61 297 aa23.29■■□□□ 1.32
CRTC3-202ENST00000420329 DAXXQ9UER7 740 aaPredicted RBP23.22■■□□□ 1.31
CRTC3-202ENST00000420329 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
CRTC3-202ENST00000420329 MIER1Q8N108 512 aa23.09■■□□□ 1.29
CRTC3-202ENST00000420329 CDK11AQ9UQ88 783 aaPredicted RBP23.08■■□□□ 1.29
CRTC3-202ENST00000420329 CLSPNQ9HAW4 1339 aa23.07■■□□□ 1.28
CRTC3-202ENST00000420329 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
CRTC3-202ENST00000420329 MYT1LQ9UL68 1186 aa23.05■■□□□ 1.28
CRTC3-202ENST00000420329 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
CRTC3-202ENST00000420329 ZNF326Q5BKZ1 582 aaKnown RBP23■■□□□ 1.27
CRTC3-202ENST00000420329 CLIP1P30622 1438 aa22.98■■□□□ 1.27
CRTC3-202ENST00000420329 FKBP8Q14318 412 aa22.97■■□□□ 1.27
CRTC3-202ENST00000420329 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
CRTC3-202ENST00000420329 EEA1Q15075 1411 aa22.91■■□□□ 1.26
CRTC3-202ENST00000420329 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
CRTC3-202ENST00000420329 GOLGA3Q08378 1498 aa22.88■■□□□ 1.25
CRTC3-202ENST00000420329 TONSLQ96HA7 1378 aa22.87■■□□□ 1.25
CRTC3-202ENST00000420329 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
CRTC3-202ENST00000420329 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
CRTC3-202ENST00000420329 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
CRTC3-202ENST00000420329 SLC4A1APQ9BWU0 796 aaKnown RBP22.77■■□□□ 1.24
CRTC3-202ENST00000420329 CECR2Q9BXF3 1484 aa22.75■■□□□ 1.23
CRTC3-202ENST00000420329 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
CRTC3-202ENST00000420329 NACADO15069 1562 aa22.7■■□□□ 1.22
CRTC3-202ENST00000420329 HIRIP3Q9BW71 556 aaPredicted RBP22.67■■□□□ 1.22
CRTC3-202ENST00000420329 FBLN2P98095 1184 aa22.66■■□□□ 1.22
CRTC3-202ENST00000420329 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
CRTC3-202ENST00000420329 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.21
CRTC3-202ENST00000420329 ANP32AP39687 249 aaKnown RBP22.62■■□□□ 1.21
CRTC3-202ENST00000420329 ZNF777Q9ULD5 760 aaPredicted RBP22.62■■□□□ 1.21
CRTC3-202ENST00000420329 CHIC2Q9UKJ5 165 aa22.6■■□□□ 1.21
CRTC3-202ENST00000420329 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
CRTC3-202ENST00000420329 SOGA1O94964 1423 aa22.59■■□□□ 1.21
CRTC3-202ENST00000420329 MTUS2Q5JR59 1369 aa22.53■■□□□ 1.2
CRTC3-202ENST00000420329 MROH2BQ7Z745 1585 aa22.51■■□□□ 1.19
CRTC3-202ENST00000420329 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
CRTC3-202ENST00000420329 IRX6P78412 446 aaPredicted RBP22.49■■□□□ 1.19
CRTC3-202ENST00000420329 MRS2Q9HD23 443 aa22.47■■□□□ 1.19
CRTC3-202ENST00000420329 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
CRTC3-202ENST00000420329 KIF27Q86VH2 1401 aa22.41■■□□□ 1.18
CRTC3-202ENST00000420329 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
CRTC3-202ENST00000420329 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
CRTC3-202ENST00000420329 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.18
CRTC3-202ENST00000420329 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.17
CRTC3-202ENST00000420329 EIF4G2P78344 907 aaKnown RBP eCLIP22.38■■□□□ 1.17
CRTC3-202ENST00000420329 SUPT16HQ9Y5B9 1047 aaKnown RBP22.38■■□□□ 1.17
CRTC3-202ENST00000420329 RRP7BPQ9NSQ0 103 aa22.37■■□□□ 1.17
CRTC3-202ENST00000420329 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
CRTC3-202ENST00000420329 SALL2Q9Y467 1007 aaPredicted RBP22.36■■□□□ 1.17
CRTC3-202ENST00000420329 SIN3AQ96ST3 1273 aa22.36■■□□□ 1.17
CRTC3-202ENST00000420329 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms