RNA–Protein interactions for RNA: ENST00000418110.5

PTPN12-204, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-204	ENST00000418110	KRTAP19-5	Q3LI72	72 aa		0.35	□□□□□ -2.35
PTPN12-204	ENST00000418110	UNC79	Q9P2D8	2635 aa		0.35	□□□□□ -2.35
PTPN12-204	ENST00000418110	COL7A1	Q02388	2944 aa		0.35	□□□□□ -2.35
PTPN12-204	ENST00000418110	FLG	P20930	4061 aa	Predicted RBP	0.34	□□□□□ -2.35
PTPN12-204	ENST00000418110	DYNC1H1	Q14204	4646 aa	Known RBP	0.34	□□□□□ -2.35
PTPN12-204	ENST00000418110	MAP1B	P46821	2468 aa	Known RBP	0.34	□□□□□ -2.36
PTPN12-204	ENST00000418110	PTPN13	Q12923	2485 aa		0.34	□□□□□ -2.36
PTPN12-204	ENST00000418110	SPRR2F	Q96RM1	72 aa		0.34	□□□□□ -2.36
PTPN12-204	ENST00000418110	CSMD1	Q96PZ7	3565 aa		0.34	□□□□□ -2.36
PTPN12-204	ENST00000418110	ITPR3	Q14573	2671 aa		0.34	□□□□□ -2.36
PTPN12-204	ENST00000418110	SETX	Q7Z333	2677 aa	Known RBP	0.34	□□□□□ -2.36
PTPN12-204	ENST00000418110	NBAS	A2RRP1	2371 aa		0.34	□□□□□ -2.36
PTPN12-204	ENST00000418110	CCDC168	Q8NDH2	2452 aa		0.33	□□□□□ -2.36
PTPN12-204	ENST00000418110	SPTBN4	Q9H254	2564 aa		0.33	□□□□□ -2.36
PTPN12-204	ENST00000418110	CFAP54	Q96N23	3096 aa		0.33	□□□□□ -2.36
PTPN12-204	ENST00000418110	SPRR2E	P22531	72 aa		0.33	□□□□□ -2.36
PTPN12-204	ENST00000418110	RPS29	P62273	56 aa	Known RBP	0.33	□□□□□ -2.36
PTPN12-204	ENST00000418110	DNAH17	Q9UFH2	4485 aa		0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	SZT2	Q5T011	3432 aa		0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	ACACA	Q13085	2346 aa		0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	KMT2D	O14686	5537 aa		0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	DEFB133	Q30KQ1	61 aa		0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	HTT	P42858	3142 aa		0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	MTOR	P42345	2549 aa		0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	SMG1	Q96Q15	3661 aa	Known RBP	0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	SON	P18583	2426 aa	Known RBP	0.32	□□□□□ -2.36
PTPN12-204	ENST00000418110	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	MUC5AC	P98088	5654 aa		0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	SYNE2	Q8WXH0	6885 aa	Known RBP	0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	PKHD1	P08F94	4074 aa		0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	USP9Y	O00507	2555 aa	Predicted RBP	0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	SVEP1	Q4LDE5	3571 aa		0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	CMYA5	Q8N3K9	4069 aa		0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	FLNB	O75369	2602 aa	Known RBP	0.31	□□□□□ -2.36
PTPN12-204	ENST00000418110	KALRN	O60229	2985 aa		0.3	□□□□□ -2.36
PTPN12-204	ENST00000418110	DNAH5	Q8TE73	4624 aa		0.3	□□□□□ -2.36
PTPN12-204	ENST00000418110		Q9Y3F1	56 aa		0.3	□□□□□ -2.36
PTPN12-204	ENST00000418110	DMXL2	Q8TDJ6	3036 aa		0.3	□□□□□ -2.36
PTPN12-204	ENST00000418110	CACNA1A	O00555	2505 aa		0.3	□□□□□ -2.36
PTPN12-204	ENST00000418110	ZFYVE26	Q68DK2	2539 aa		0.3	□□□□□ -2.36
PTPN12-204	ENST00000418110	ZAN	Q9Y493	2812 aa		0.3	□□□□□ -2.36
PTPN12-204	ENST00000418110	FRYL	O94915	3013 aa		0.29	□□□□□ -2.36
PTPN12-204	ENST00000418110	HERC1	Q15751	4861 aa		0.29	□□□□□ -2.36
PTPN12-204	ENST00000418110	HIVEP1	P15822	2718 aa		0.29	□□□□□ -2.36
PTPN12-204	ENST00000418110	STATH	P02808	62 aa		0.29	□□□□□ -2.36
PTPN12-204	ENST00000418110	LINC01556	Q5JQF7	62 aa		0.29	□□□□□ -2.36
PTPN12-204	ENST00000418110	ACACB	O00763	2458 aa		0.29	□□□□□ -2.36
PTPN12-204	ENST00000418110	EPG5	Q9HCE0	2579 aa		0.29	□□□□□ -2.36
PTPN12-204	ENST00000418110	TRRAP	Q9Y4A5	3859 aa		0.28	□□□□□ -2.36
PTPN12-204	ENST00000418110	HMCN2	Q8NDA2	5059 aa		0.28	□□□□□ -2.36
PTPN12-204	ENST00000418110	UTP20	O75691	2785 aa	Known RBP	0.28	□□□□□ -2.36
PTPN12-204	ENST00000418110	NBEA	Q8NFP9	2946 aa		0.28	□□□□□ -2.36
PTPN12-204	ENST00000418110	FSIP2	Q5CZC0	6907 aa		0.28	□□□□□ -2.36
PTPN12-204	ENST00000418110	COL6A3	P12111	3177 aa		0.28	□□□□□ -2.37
PTPN12-204	ENST00000418110	NBEAL2	Q6ZNJ1	2754 aa		0.28	□□□□□ -2.37
PTPN12-204	ENST00000418110	FAM186A	A6NE01	2351 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	ATM	Q13315	3056 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	MUC17	Q685J3	4493 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	CD52	P31358	61 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	COX14	Q96I36	57 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	LAMA3	Q16787	3333 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	XIRP2	A4UGR9	3374 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	RIF1	Q5UIP0	2472 aa	Known RBP	0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	MAST4	O15021	2626 aa		0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	NIPBL	Q6KC79	2804 aa	eCLIP	0.27	□□□□□ -2.37
PTPN12-204	ENST00000418110	CSMD2	Q7Z408	3487 aa		0.26	□□□□□ -2.37
PTPN12-204	ENST00000418110	FAT4	Q6V0I7	4981 aa		0.26	□□□□□ -2.37
PTPN12-204	ENST00000418110		A0A096LPF7	62 aa		0.26	□□□□□ -2.37
PTPN12-204	ENST00000418110	DEFB108B	Q8NET1	73 aa		0.26	□□□□□ -2.37
PTPN12-204	ENST00000418110	NCOR2	Q9Y618	2525 aa		0.26	□□□□□ -2.37
PTPN12-204	ENST00000418110	MKI67	P46013	3256 aa	Known RBP	0.26	□□□□□ -2.37
PTPN12-204	ENST00000418110	MUC3A	Q02505	3323 aa		0.26	□□□□□ -2.37
PTPN12-204	ENST00000418110	LAMA1	P25391	3075 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	WDR87	Q6ZQQ6	2873 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	MT1E	P04732	61 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	C5orf42	Q9H799	3197 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	TG	P01266	2768 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	ITPR1	Q14643	2758 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	DMD	P11532	3685 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	DCHS1	Q96JQ0	3298 aa		0.25	□□□□□ -2.37
PTPN12-204	ENST00000418110	TEP1	Q99973	2627 aa	Known RBP	0.24	□□□□□ -2.37
PTPN12-204	ENST00000418110	MT1H	P80294	61 aa		0.24	□□□□□ -2.37
PTPN12-204	ENST00000418110	LRRK2	Q5S007	2527 aa		0.24	□□□□□ -2.37
PTPN12-204	ENST00000418110	MXRA5	Q9NR99	2828 aa		0.23	□□□□□ -2.37
PTPN12-204	ENST00000418110	VPS13C	Q709C8	3753 aa		0.23	□□□□□ -2.37
PTPN12-204	ENST00000418110	DNAH12	Q6ZR08	3092 aa		0.23	□□□□□ -2.37
PTPN12-204	ENST00000418110	PRUNE2	Q8WUY3	3088 aa		0.23	□□□□□ -2.37
PTPN12-204	ENST00000418110	LRP2	P98164	4655 aa		0.23	□□□□□ -2.37
PTPN12-204	ENST00000418110	MT1L	Q93083	61 aa		0.23	□□□□□ -2.37
PTPN12-204	ENST00000418110	LRBA	P50851	2863 aa		0.23	□□□□□ -2.37
PTPN12-204	ENST00000418110	ADGRG4	Q8IZF6	3080 aa		0.22	□□□□□ -2.37
PTPN12-204	ENST00000418110	BOD1L1	Q8NFC6	3051 aa		0.22	□□□□□ -2.37
PTPN12-204	ENST00000418110	SPG11	Q96JI7	2443 aa		0.22	□□□□□ -2.37
PTPN12-204	ENST00000418110	LOC400499	M0QZD8	3231 aa		0.21	□□□□□ -2.38
PTPN12-204	ENST00000418110	MYO18B	Q8IUG5	2567 aa		0.21	□□□□□ -2.38
PTPN12-204	ENST00000418110	FREM2	Q5SZK8	3169 aa		0.21	□□□□□ -2.38
PTPN12-204	ENST00000418110	TLN2	Q9Y4G6	2542 aa		0.21	□□□□□ -2.38
PTPN12-204	ENST00000418110	FASN	P49327	2511 aa	Known RBP	0.21	□□□□□ -2.38

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