RNA–Protein interactions for RNA: ENST00000418110.5

PTPN12-204, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-204ENST00000418110 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
PTPN12-204ENST00000418110 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
PTPN12-204ENST00000418110 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
PTPN12-204ENST00000418110 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
PTPN12-204ENST00000418110 FOXD1Q16676 465 aa18.39■□□□□ 0.53
PTPN12-204ENST00000418110 MSH5O43196 834 aa17.32■□□□□ 0.36
PTPN12-204ENST00000418110 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
PTPN12-204ENST00000418110 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
PTPN12-204ENST00000418110 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
PTPN12-204ENST00000418110 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
PTPN12-204ENST00000418110 ADRA2BP18089 450 aa17■□□□□ 0.31
PTPN12-204ENST00000418110 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
PTPN12-204ENST00000418110 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
PTPN12-204ENST00000418110 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
PTPN12-204ENST00000418110 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
PTPN12-204ENST00000418110 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
PTPN12-204ENST00000418110 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
PTPN12-204ENST00000418110 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
PTPN12-204ENST00000418110 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
PTPN12-204ENST00000418110 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
PTPN12-204ENST00000418110 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
PTPN12-204ENST00000418110 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
PTPN12-204ENST00000418110 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
PTPN12-204ENST00000418110 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
PTPN12-204ENST00000418110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■□□□□ 10.5
PTPN12-204ENST00000418110 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
PTPN12-204ENST00000418110 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
PTPN12-204ENST00000418110 CAPN15O75808 1086 aa13.86□□□□□ -0.19
PTPN12-204ENST00000418110 KCNA4P22459 653 aa13.82□□□□□ -0.2
PTPN12-204ENST00000418110 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
PTPN12-204ENST00000418110 DSG3P32926 999 aa13.73□□□□□ -0.21
PTPN12-204ENST00000418110 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
PTPN12-204ENST00000418110 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
PTPN12-204ENST00000418110 APLP2Q06481 763 aa13.56□□□□□ -0.24
PTPN12-204ENST00000418110 ABCB7O75027 752 aa13.52□□□□□ -0.25
PTPN12-204ENST00000418110 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
PTPN12-204ENST00000418110 POTEHQ6S545 545 aa13.5□□□□□ -0.25
PTPN12-204ENST00000418110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
PTPN12-204ENST00000418110 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
PTPN12-204ENST00000418110 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
PTPN12-204ENST00000418110 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
PTPN12-204ENST00000418110 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
PTPN12-204ENST00000418110 POLA2Q14181 598 aa13.13□□□□□ -0.31
PTPN12-204ENST00000418110 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
PTPN12-204ENST00000418110 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
PTPN12-204ENST00000418110 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
PTPN12-204ENST00000418110 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
PTPN12-204ENST00000418110 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
PTPN12-204ENST00000418110 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
PTPN12-204ENST00000418110 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
PTPN12-204ENST00000418110 ZBTB22O15209 634 aa12.66□□□□□ -0.38
PTPN12-204ENST00000418110 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
PTPN12-204ENST00000418110 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
PTPN12-204ENST00000418110 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
PTPN12-204ENST00000418110 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
PTPN12-204ENST00000418110 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
PTPN12-204ENST00000418110 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
PTPN12-204ENST00000418110 FBLN2P98095 1184 aa12.47□□□□□ -0.41
PTPN12-204ENST00000418110 HAX1O00165 279 aa12.46□□□□□ -0.41
PTPN12-204ENST00000418110 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTPN12-204ENST00000418110 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
PTPN12-204ENST00000418110 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
PTPN12-204ENST00000418110 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
PTPN12-204ENST00000418110 CLEC11AQ9Y240 323 aa12.33□□□□□ -0.44
PTPN12-204ENST00000418110 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
PTPN12-204ENST00000418110 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
PTPN12-204ENST00000418110 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
PTPN12-204ENST00000418110 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
PTPN12-204ENST00000418110 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
PTPN12-204ENST00000418110 EVX2Q03828 476 aa12.21□□□□□ -0.45
PTPN12-204ENST00000418110 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
PTPN12-204ENST00000418110 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
PTPN12-204ENST00000418110 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPN12-204ENST00000418110 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
PTPN12-204ENST00000418110 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
PTPN12-204ENST00000418110 GABBR2O75899 941 aa11.94□□□□□ -0.5
PTPN12-204ENST00000418110 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
PTPN12-204ENST00000418110 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
PTPN12-204ENST00000418110 LHX8Q68G74 356 aa11.78□□□□□ -0.52
PTPN12-204ENST00000418110 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
PTPN12-204ENST00000418110 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
PTPN12-204ENST00000418110 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
PTPN12-204ENST00000418110 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
PTPN12-204ENST00000418110 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
PTPN12-204ENST00000418110 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
PTPN12-204ENST00000418110 CLCN6P51797 869 aa11.64□□□□□ -0.55
PTPN12-204ENST00000418110 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
PTPN12-204ENST00000418110 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
PTPN12-204ENST00000418110 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
PTPN12-204ENST00000418110 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTPN12-204ENST00000418110 PHF12Q96QT6 1004 aa11.47□□□□□ -0.57
PTPN12-204ENST00000418110 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
PTPN12-204ENST00000418110 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
PTPN12-204ENST00000418110 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
PTPN12-204ENST00000418110 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
PTPN12-204ENST00000418110 OTUD5Q96G74 571 aa11.28□□□□□ -0.6
PTPN12-204ENST00000418110 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
PTPN12-204ENST00000418110 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
PTPN12-204ENST00000418110 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
PTPN12-204ENST00000418110 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms