RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
LINC01349-201ENST00000416343 COL7A1Q02388 2944 aa1.98□□□□□ -2.09
LINC01349-201ENST00000416343 NSD1Q96L73 2696 aaPredicted RBP1.98□□□□□ -2.09
LINC01349-201ENST00000416343 FLG2Q5D862 2391 aaPredicted RBP1.97□□□□□ -2.09
LINC01349-201ENST00000416343 KRTAP13-2Q52LG2 175 aa1.97□□□□□ -2.09
LINC01349-201ENST00000416343 MAST4O15021 2626 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 ATRQ13535 2644 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 TRRAPQ9Y4A5 3859 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 SMR3AQ99954 134 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 S4R3F8 94 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 MEGF8Q7Z7M0 2845 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 FASNP49327 2511 aaKnown RBP1.95□□□□□ -2.1
LINC01349-201ENST00000416343 FLNBO75369 2602 aaKnown RBP1.95□□□□□ -2.1
LINC01349-201ENST00000416343 NOTCH1P46531 2555 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 C10orf95Q9H7T3 257 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 ITPR2Q14571 2701 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 TGP01266 2768 aa1.94□□□□□ -2.1
LINC01349-201ENST00000416343 LYSTQ99698 3801 aa1.94□□□□□ -2.1
LINC01349-201ENST00000416343 A0A0D9SG42 100 aa1.94□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH3Q8TD57 4116 aa1.93□□□□□ -2.1
LINC01349-201ENST00000416343 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH8Q96JB1 4490 aa1.93□□□□□ -2.1
LINC01349-201ENST00000416343 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 LCE3AQ5TA76 89 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 CAMK2N1Q7Z7J9 78 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 COL6A5A8TX70 2615 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH10Q8IVF4 4471 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 DYNC2H1Q8NCM8 4307 aaKnown RBP1.91□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH17Q9UFH2 4485 aa1.91□□□□□ -2.1
LINC01349-201ENST00000416343 KRTAP1-4P0C5Y4 121 aa1.91□□□□□ -2.1
LINC01349-201ENST00000416343 STAB2Q8WWQ8 2551 aa1.91□□□□□ -2.1
LINC01349-201ENST00000416343 ANK2Q01484 3957 aa1.9□□□□□ -2.1
LINC01349-201ENST00000416343 M0QZ58 72 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP12-2P59991 146 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 HECTD4Q9Y4D8 3996 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 USP24Q9UPU5 2620 aa1.89□□□□□ -2.11
LINC01349-201ENST00000416343 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
LINC01349-201ENST00000416343 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
LINC01349-201ENST00000416343 ZNF469Q96JG9 3925 aaPredicted RBP1.89□□□□□ -2.11
LINC01349-201ENST00000416343 J3QKU1 62 aa1.87□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
LINC01349-201ENST00000416343 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
LINC01349-201ENST00000416343 STAB1Q9NY15 2570 aa1.86□□□□□ -2.11
LINC01349-201ENST00000416343 HUWE1Q7Z6Z7 4374 aaKnown RBP1.85□□□□□ -2.11
LINC01349-201ENST00000416343 DNAH11Q96DT5 4516 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 DNAH9Q9NYC9 4486 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 C9orf92A6NGG3 77 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
LINC01349-201ENST00000416343 DNAH2Q9P225 4427 aa1.84□□□□□ -2.12
LINC01349-201ENST00000416343 DNAH6Q9C0G6 4158 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 CMYA5Q8N3K9 4069 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 PRO2289Q9P1D8 64 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 FBN3Q75N90 2809 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 PRKDCP78527 4128 aaKnown RBP1.81□□□□□ -2.12
LINC01349-201ENST00000416343 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
LINC01349-201ENST00000416343 DNAH7Q8WXX0 4024 aa1.81□□□□□ -2.12
LINC01349-201ENST00000416343 KRTAP10-1P60331 282 aa1.81□□□□□ -2.12
LINC01349-201ENST00000416343 MGAM2Q2M2H8 2515 aa1.81□□□□□ -2.12
LINC01349-201ENST00000416343 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
LINC01349-201ENST00000416343 LRP1BQ9NZR2 4599 aa1.79□□□□□ -2.12
LINC01349-201ENST00000416343 INE1O15225 51 aa1.79□□□□□ -2.12
LINC01349-201ENST00000416343 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
LINC01349-201ENST00000416343 SACSQ9NZJ4 4579 aa1.76□□□□□ -2.13
LINC01349-201ENST00000416343 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
LINC01349-201ENST00000416343 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
LINC01349-201ENST00000416343 R4GN34 69 aa1.74□□□□□ -2.13
LINC01349-201ENST00000416343 VPS13BQ7Z7G8 4022 aa1.73□□□□□ -2.13
LINC01349-201ENST00000416343 KMT2AQ03164 3969 aa1.72□□□□□ -2.13
LINC01349-201ENST00000416343 DNAH5Q8TE73 4624 aa1.72□□□□□ -2.13
LINC01349-201ENST00000416343 MYCBP2O75592 4640 aa1.71□□□□□ -2.13
LINC01349-201ENST00000416343 STARD9Q9P2P6 4700 aa1.71□□□□□ -2.14
LINC01349-201ENST00000416343 PKHD1L1Q86WI1 4243 aa1.71□□□□□ -2.14
LINC01349-201ENST00000416343 Q5VSD8 79 aa1.7□□□□□ -2.14
LINC01349-201ENST00000416343 KRTAP10-4P60372 401 aaPredicted RBP1.69□□□□□ -2.14
LINC01349-201ENST00000416343 APOBP04114 4563 aaKnown RBP1.68□□□□□ -2.14
LINC01349-201ENST00000416343 PKD1P98161 4303 aa1.68□□□□□ -2.14
LINC01349-201ENST00000416343 TNP1P09430 55 aa1.68□□□□□ -2.14
LINC01349-201ENST00000416343 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
LINC01349-201ENST00000416343 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
LINC01349-201ENST00000416343 DYNC1H1Q14204 4646 aaKnown RBP1.66□□□□□ -2.14
LINC01349-201ENST00000416343 SMR3BP02814 79 aaPredicted RBP1.65□□□□□ -2.15
LINC01349-201ENST00000416343 FAT2Q9NYQ8 4349 aa1.64□□□□□ -2.15
LINC01349-201ENST00000416343 TNXBP22105 4242 aa1.64□□□□□ -2.15
LINC01349-201ENST00000416343 FAT3Q8TDW7 4589 aa1.63□□□□□ -2.15
LINC01349-201ENST00000416343 HSPG2P98160 4391 aa1.62□□□□□ -2.15
LINC01349-201ENST00000416343 FAT1Q14517 4588 aa1.61□□□□□ -2.15
LINC01349-201ENST00000416343 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
LINC01349-201ENST00000416343 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
LINC01349-201ENST00000416343 DNHD1Q96M86 4753 aa1.53□□□□□ -2.16
LINC01349-201ENST00000416343 FLGP20930 4061 aaPredicted RBP1.52□□□□□ -2.17
LINC01349-201ENST00000416343 MT1HL1P0DM35 61 aa1.52□□□□□ -2.17
LINC01349-201ENST00000416343 KRTAP10-10P60014 251 aa1.5□□□□□ -2.17
LINC01349-201ENST00000416343 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
LINC01349-201ENST00000416343 HERC1Q15751 4861 aa1.48□□□□□ -2.17
LINC01349-201ENST00000416343 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
LINC01349-201ENST00000416343 HYDINQ4G0P3 5121 aa1.46□□□□□ -2.18
LINC01349-201ENST00000416343 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms