RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
LINC01349-201ENST00000416343 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
LINC01349-201ENST00000416343 CHIC1Q5VXU3 224 aa15.34■□□□□ 0.05
LINC01349-201ENST00000416343 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
LINC01349-201ENST00000416343 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
LINC01349-201ENST00000416343 MSH5O43196 834 aa12.92□□□□□ -0.34
LINC01349-201ENST00000416343 FOXD1Q16676 465 aa12.91□□□□□ -0.34
LINC01349-201ENST00000416343 PLPPR3Q6T4P5 718 aa12.2□□□□□ -0.46
LINC01349-201ENST00000416343 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
LINC01349-201ENST00000416343 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
LINC01349-201ENST00000416343 PIAS4Q8N2W9 510 aaPredicted RBP11.97□□□□□ -0.49
LINC01349-201ENST00000416343 ADRA2BP18089 450 aa11.95□□□□□ -0.5
LINC01349-201ENST00000416343 POTEHQ6S545 545 aa11.89□□□□□ -0.51
LINC01349-201ENST00000416343 MAPK8IP2Q13387 824 aaPredicted RBP11□□□□□ -0.65
LINC01349-201ENST00000416343 DMRT2Q9Y5R5 561 aa10.96□□□□□ -0.65
LINC01349-201ENST00000416343 SCAF1Q9H7N4 1312 aaKnown RBP10.9□□□□□ -0.66
LINC01349-201ENST00000416343 RNF39Q9H2S5 420 aa10.77□□□□□ -0.69
LINC01349-201ENST00000416343 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
LINC01349-201ENST00000416343 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
LINC01349-201ENST00000416343 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
LINC01349-201ENST00000416343 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
LINC01349-201ENST00000416343 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
LINC01349-201ENST00000416343 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
LINC01349-201ENST00000416343 DCAF8L1A6NGE4 600 aa10.37□□□□□ -0.75
LINC01349-201ENST00000416343 SP7Q8TDD2 431 aaPredicted RBP10.31□□□□□ -0.76
LINC01349-201ENST00000416343 DNAJC5BQ9UF47 199 aa10.25□□□□□ -0.77
LINC01349-201ENST00000416343 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
LINC01349-201ENST00000416343 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
LINC01349-201ENST00000416343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.96□□□□□ -0.82
LINC01349-201ENST00000416343 KCNA4P22459 653 aa9.9□□□□□ -0.82
LINC01349-201ENST00000416343 U3KPZ7 1027 aaPredicted RBP9.81□□□□□ -0.84
LINC01349-201ENST00000416343 SLC4A2P04920 1241 aa9.73□□□□□ -0.85
LINC01349-201ENST00000416343 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
LINC01349-201ENST00000416343 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
LINC01349-201ENST00000416343 LHX8Q68G74 356 aa9.64□□□□□ -0.87
LINC01349-201ENST00000416343 DSG3P32926 999 aa9.63□□□□□ -0.87
LINC01349-201ENST00000416343 CAPN15O75808 1086 aa9.59□□□□□ -0.87
LINC01349-201ENST00000416343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.47□□□□□ -0.89
LINC01349-201ENST00000416343 HNRNPUL2Q1KMD3 747 aaKnown RBP9.47□□□□□ -0.89
LINC01349-201ENST00000416343 APLP2Q06481 763 aa9.46□□□□□ -0.9
LINC01349-201ENST00000416343 SAMD1Q6SPF0 538 aaPredicted RBP9.43□□□□□ -0.9
LINC01349-201ENST00000416343 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
LINC01349-201ENST00000416343 TRHP20396 242 aaPredicted RBP9.42□□□□□ -0.9
LINC01349-201ENST00000416343 HAX1O00165 279 aa9.4□□□□□ -0.9
LINC01349-201ENST00000416343 ABCB7O75027 752 aa9.37□□□□□ -0.91
LINC01349-201ENST00000416343 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
LINC01349-201ENST00000416343 SLC4A1APQ9BWU0 796 aaKnown RBP9.3□□□□□ -0.92
LINC01349-201ENST00000416343 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
LINC01349-201ENST00000416343 PCDH10Q9P2E7 1040 aa9.22□□□□□ -0.93
LINC01349-201ENST00000416343 POLA2Q14181 598 aa9.21□□□□□ -0.94
LINC01349-201ENST00000416343 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
LINC01349-201ENST00000416343 POTEMA6NI47 508 aa9.19□□□□□ -0.94
LINC01349-201ENST00000416343 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
LINC01349-201ENST00000416343 ZBTB22O15209 634 aa9.14□□□□□ -0.95
LINC01349-201ENST00000416343 POTEGQ6S5H5 508 aa9.09□□□□□ -0.95
LINC01349-201ENST00000416343 ZBTB12Q9Y330 459 aaPredicted RBP9.02□□□□□ -0.97
LINC01349-201ENST00000416343 ATXN8OSP0DMR3 200 aa8.99□□□□□ -0.97
LINC01349-201ENST00000416343 PIP4P2Q8N4L2 257 aa8.99□□□□□ -0.97
LINC01349-201ENST00000416343 EVX2Q03828 476 aa8.98□□□□□ -0.97
LINC01349-201ENST00000416343 AKT1S1Q96B36 256 aa8.95□□□□□ -0.98
LINC01349-201ENST00000416343 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
LINC01349-201ENST00000416343 REM2Q8IYK8 340 aaPredicted RBP8.87□□□□□ -0.99
LINC01349-201ENST00000416343 PITPNM1O00562 1244 aa8.77□□□□□ -1.01
LINC01349-201ENST00000416343 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
LINC01349-201ENST00000416343 GABBR2O75899 941 aa8.76□□□□□ -1.01
LINC01349-201ENST00000416343 SPDYE2BA6NHP3 402 aa8.75□□□□□ -1.01
LINC01349-201ENST00000416343 SPDYE6P0CI01 402 aa8.75□□□□□ -1.01
LINC01349-201ENST00000416343 SPDYE2Q495Y8 402 aa8.75□□□□□ -1.01
LINC01349-201ENST00000416343 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
LINC01349-201ENST00000416343 FBLN2P98095 1184 aa8.74□□□□□ -1.01
LINC01349-201ENST00000416343 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
LINC01349-201ENST00000416343 CSRNP3Q8WYN3 585 aa8.65□□□□□ -1.02
LINC01349-201ENST00000416343 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
LINC01349-201ENST00000416343 SPDYE1Q8NFV5 336 aaPredicted RBP8.58□□□□□ -1.04
LINC01349-201ENST00000416343 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
LINC01349-201ENST00000416343 PRKAR2AP13861 404 aaKnown RBP8.51□□□□□ -1.05
LINC01349-201ENST00000416343 CLEC11AQ9Y240 323 aa8.51□□□□□ -1.05
LINC01349-201ENST00000416343 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
LINC01349-201ENST00000416343 PABPN1Q86U42 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
LINC01349-201ENST00000416343 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
LINC01349-201ENST00000416343 EHMT2Q96KQ7 1210 aa8.42□□□□□ -1.06
LINC01349-201ENST00000416343 PRR29P0C7W0 189 aa8.4□□□□□ -1.06
LINC01349-201ENST00000416343 CHADLQ6NUI6 762 aa8.39□□□□□ -1.07
LINC01349-201ENST00000416343 MMRN1Q13201 1228 aa8.32□□□□□ -1.08
LINC01349-201ENST00000416343 CDAN1Q8IWY9 1227 aa8.32□□□□□ -1.08
LINC01349-201ENST00000416343 FARP1Q9Y4F1 1045 aaPredicted RBP8.31□□□□□ -1.08
LINC01349-201ENST00000416343 SPDYE4A6NLX3 237 aa8.26□□□□□ -1.09
LINC01349-201ENST00000416343 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
LINC01349-201ENST00000416343 FAM163AQ96GL9 167 aaPredicted RBP8.25□□□□□ -1.09
LINC01349-201ENST00000416343 DCBLD2Q96PD2 775 aa8.25□□□□□ -1.09
LINC01349-201ENST00000416343 CREBZFQ9NS37 354 aa8.25□□□□□ -1.09
LINC01349-201ENST00000416343 STAG3Q9UJ98 1225 aa8.24□□□□□ -1.09
LINC01349-201ENST00000416343 CD44P16070 742 aaKnown RBP8.23□□□□□ -1.09
LINC01349-201ENST00000416343 CLCN6P51797 869 aa8.18□□□□□ -1.1
LINC01349-201ENST00000416343 PROM2Q8N271 834 aa8.18□□□□□ -1.1
LINC01349-201ENST00000416343 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
LINC01349-201ENST00000416343 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
LINC01349-201ENST00000416343 MNX1P50219 401 aaPredicted RBP8.14□□□□□ -1.11
LINC01349-201ENST00000416343 SPNS2Q8IVW8 549 aa8.13□□□□□ -1.11
LINC01349-201ENST00000416343 ZRANB1Q9UGI0 708 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms