RNA–Protein interactions for RNA: ENST00000397932.6

TRPM2-204, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM2, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-204ENST00000397932 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
TRPM2-204ENST00000397932 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
TRPM2-204ENST00000397932 VPS13DQ5THJ4 4388 aa6.19□□□□□ -1.42
TRPM2-204ENST00000397932 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
TRPM2-204ENST00000397932 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
TRPM2-204ENST00000397932 DNAH5Q8TE73 4624 aa6.08□□□□□ -1.44
TRPM2-204ENST00000397932 DNAH11Q96DT5 4516 aa6.07□□□□□ -1.44
TRPM2-204ENST00000397932 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
TRPM2-204ENST00000397932 DNAH8Q96JB1 4490 aa6.05□□□□□ -1.44
TRPM2-204ENST00000397932 KRTAP10-12P60413 245 aa6.02□□□□□ -1.44
TRPM2-204ENST00000397932 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
TRPM2-204ENST00000397932 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
TRPM2-204ENST00000397932 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.45
TRPM2-204ENST00000397932 STARD9Q9P2P6 4700 aa5.96□□□□□ -1.46
TRPM2-204ENST00000397932 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
TRPM2-204ENST00000397932 DYNC2H1Q8NCM8 4307 aaKnown RBP5.92□□□□□ -1.46
TRPM2-204ENST00000397932 SACSQ9NZJ4 4579 aa5.89□□□□□ -1.47
TRPM2-204ENST00000397932 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
TRPM2-204ENST00000397932 ANK2Q01484 3957 aa5.86□□□□□ -1.47
TRPM2-204ENST00000397932 DYNC1H1Q14204 4646 aaKnown RBP5.85□□□□□ -1.47
TRPM2-204ENST00000397932 LRP1BQ9NZR2 4599 aa5.84□□□□□ -1.47
TRPM2-204ENST00000397932 CMYA5Q8N3K9 4069 aa5.84□□□□□ -1.48
TRPM2-204ENST00000397932 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
TRPM2-204ENST00000397932 DNAH6Q9C0G6 4158 aa5.77□□□□□ -1.49
TRPM2-204ENST00000397932 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
TRPM2-204ENST00000397932 KMT2AQ03164 3969 aa5.75□□□□□ -1.49
TRPM2-204ENST00000397932 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
TRPM2-204ENST00000397932 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
TRPM2-204ENST00000397932 FAT1Q14517 4588 aa5.72□□□□□ -1.49
TRPM2-204ENST00000397932 FRAS1Q86XX4 4008 aa5.72□□□□□ -1.49
TRPM2-204ENST00000397932 DNHD1Q96M86 4753 aa5.72□□□□□ -1.49
TRPM2-204ENST00000397932 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
TRPM2-204ENST00000397932 PRKDCP78527 4128 aaKnown RBP5.7□□□□□ -1.5
TRPM2-204ENST00000397932 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.5
TRPM2-204ENST00000397932 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
TRPM2-204ENST00000397932 LYSTQ99698 3801 aa5.57□□□□□ -1.52
TRPM2-204ENST00000397932 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
TRPM2-204ENST00000397932 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
TRPM2-204ENST00000397932 MT1HP80294 61 aa5.46□□□□□ -1.54
TRPM2-204ENST00000397932 RYR1P21817 5038 aa5.44□□□□□ -1.54
TRPM2-204ENST00000397932 MT2AP02795 61 aa5.42□□□□□ -1.54
TRPM2-204ENST00000397932 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
TRPM2-204ENST00000397932 KRTAP17-1Q9BYP8 105 aa5.35□□□□□ -1.55
TRPM2-204ENST00000397932 MT1FP04733 61 aa5.34□□□□□ -1.56
TRPM2-204ENST00000397932 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
TRPM2-204ENST00000397932 RYR2Q92736 4967 aa5.31□□□□□ -1.56
TRPM2-204ENST00000397932 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
TRPM2-204ENST00000397932 RYR3Q15413 4870 aa5.28□□□□□ -1.56
TRPM2-204ENST00000397932 HYDINQ4G0P3 5121 aa5.28□□□□□ -1.56
TRPM2-204ENST00000397932 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
TRPM2-204ENST00000397932 PKHD1L1Q86WI1 4243 aa5.25□□□□□ -1.57
TRPM2-204ENST00000397932 PKD1P98161 4303 aa5.23□□□□□ -1.57
TRPM2-204ENST00000397932 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
TRPM2-204ENST00000397932 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
TRPM2-204ENST00000397932 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
TRPM2-204ENST00000397932 KIAA1109Q2LD37 5005 aa5.2□□□□□ -1.58
TRPM2-204ENST00000397932 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
TRPM2-204ENST00000397932 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
TRPM2-204ENST00000397932 HSPG2P98160 4391 aa5.15□□□□□ -1.59
TRPM2-204ENST00000397932 PKHD1P08F94 4074 aa5.14□□□□□ -1.59
TRPM2-204ENST00000397932 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
TRPM2-204ENST00000397932 TNXBP22105 4242 aa5.09□□□□□ -1.59
TRPM2-204ENST00000397932 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
TRPM2-204ENST00000397932 MT1XP80297 61 aa5.06□□□□□ -1.6
TRPM2-204ENST00000397932 LRP2P98164 4655 aa5.05□□□□□ -1.6
TRPM2-204ENST00000397932 MT1BP07438 61 aa5□□□□□ -1.61
TRPM2-204ENST00000397932 LCE2CQ5TA81 110 aa4.98□□□□□ -1.61
TRPM2-204ENST00000397932 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
TRPM2-204ENST00000397932 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
TRPM2-204ENST00000397932 HERC1Q15751 4861 aa4.96□□□□□ -1.62
TRPM2-204ENST00000397932 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
TRPM2-204ENST00000397932 KMT2CQ8NEZ4 4911 aaKnown RBP4.93□□□□□ -1.62
TRPM2-204ENST00000397932 BIRC6Q9NR09 4857 aa4.93□□□□□ -1.62
TRPM2-204ENST00000397932 LPAP08519 4548 aa4.92□□□□□ -1.62
TRPM2-204ENST00000397932 HERC2O95714 4834 aa4.91□□□□□ -1.62
TRPM2-204ENST00000397932 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
TRPM2-204ENST00000397932 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
TRPM2-204ENST00000397932 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
TRPM2-204ENST00000397932 MUC17Q685J3 4493 aa4.79□□□□□ -1.64
TRPM2-204ENST00000397932 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
TRPM2-204ENST00000397932 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
TRPM2-204ENST00000397932 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
TRPM2-204ENST00000397932 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
TRPM2-204ENST00000397932 MT1GP13640 62 aa4.67□□□□□ -1.66
TRPM2-204ENST00000397932 PCLOQ9Y6V0 5065 aa4.66□□□□□ -1.66
TRPM2-204ENST00000397932 SPRR2EP22531 72 aa4.58□□□□□ -1.68
TRPM2-204ENST00000397932 SPRR2BP35325 72 aa4.58□□□□□ -1.68
TRPM2-204ENST00000397932 SPRR2AP35326 72 aa4.58□□□□□ -1.68
TRPM2-204ENST00000397932 LCE2BO14633 110 aa4.56□□□□□ -1.68
TRPM2-204ENST00000397932 MT1LQ93083 61 aa4.54□□□□□ -1.68
TRPM2-204ENST00000397932 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
TRPM2-204ENST00000397932 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
TRPM2-204ENST00000397932 PRM1P04553 51 aa4.51□□□□□ -1.69
TRPM2-204ENST00000397932 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
TRPM2-204ENST00000397932 MT1EP04732 61 aa4.49□□□□□ -1.69
TRPM2-204ENST00000397932 SPRR2DP22532 72 aa4.43□□□□□ -1.7
TRPM2-204ENST00000397932 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
TRPM2-204ENST00000397932 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
TRPM2-204ENST00000397932 HMCN2Q8NDA2 5059 aa4.36□□□□□ -1.71
TRPM2-204ENST00000397932 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms