RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 NBEAL2Q6ZNJ1 2754 aa1.77□□□□□ -2.13
XRCC4-203ENST00000396027 KRTAP12-1P59990 96 aa1.76□□□□□ -2.13
XRCC4-203ENST00000396027 ACANP16112 2415 aa1.76□□□□□ -2.13
XRCC4-203ENST00000396027 MTORP42345 2549 aa1.76□□□□□ -2.13
XRCC4-203ENST00000396027 J3QKU1 62 aa1.76□□□□□ -2.13
XRCC4-203ENST00000396027 CCDC168Q8NDH2 2452 aa1.75□□□□□ -2.13
XRCC4-203ENST00000396027 LRRK2Q5S007 2527 aa1.75□□□□□ -2.13
XRCC4-203ENST00000396027 USP24Q9UPU5 2620 aa1.75□□□□□ -2.13
XRCC4-203ENST00000396027 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
XRCC4-203ENST00000396027 FLNAP21333 2647 aaKnown RBP1.74□□□□□ -2.13
XRCC4-203ENST00000396027 DNAH1Q9P2D7 4330 aa1.74□□□□□ -2.13
XRCC4-203ENST00000396027 HELZ2Q9BYK8 2649 aaKnown RBP1.73□□□□□ -2.13
XRCC4-203ENST00000396027 VWFP04275 2813 aa1.73□□□□□ -2.13
XRCC4-203ENST00000396027 TENM4Q6N022 2769 aa1.73□□□□□ -2.13
XRCC4-203ENST00000396027 SETD2Q9BYW2 2564 aaPredicted RBP1.73□□□□□ -2.13
XRCC4-203ENST00000396027 GCN1Q92616 2671 aaKnown RBP1.73□□□□□ -2.13
XRCC4-203ENST00000396027 TRRAPQ9Y4A5 3859 aa1.72□□□□□ -2.13
XRCC4-203ENST00000396027 DNAH3Q8TD57 4116 aa1.72□□□□□ -2.13
XRCC4-203ENST00000396027 SRRM2Q9UQ35 2752 aaKnown RBP1.72□□□□□ -2.13
XRCC4-203ENST00000396027 COL6A5A8TX70 2615 aa1.71□□□□□ -2.14
XRCC4-203ENST00000396027 CMYA5Q8N3K9 4069 aa1.71□□□□□ -2.14
XRCC4-203ENST00000396027 ANK2Q01484 3957 aa1.71□□□□□ -2.14
XRCC4-203ENST00000396027 HIVEP1P15822 2718 aa1.7□□□□□ -2.14
XRCC4-203ENST00000396027 TENM1Q9UKZ4 2725 aa1.7□□□□□ -2.14
XRCC4-203ENST00000396027 ITPR2Q14571 2701 aa1.7□□□□□ -2.14
XRCC4-203ENST00000396027 UNC79Q9P2D8 2635 aa1.7□□□□□ -2.14
XRCC4-203ENST00000396027 C9orf92A6NGG3 77 aa1.7□□□□□ -2.14
XRCC4-203ENST00000396027 MEGF8Q7Z7M0 2845 aa1.69□□□□□ -2.14
XRCC4-203ENST00000396027 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
XRCC4-203ENST00000396027 FASNP49327 2511 aaKnown RBP1.69□□□□□ -2.14
XRCC4-203ENST00000396027 TNP1P09430 55 aa1.68□□□□□ -2.14
XRCC4-203ENST00000396027 DNAH10Q8IVF4 4471 aa1.68□□□□□ -2.14
XRCC4-203ENST00000396027 LYSTQ99698 3801 aa1.67□□□□□ -2.14
XRCC4-203ENST00000396027 HUWE1Q7Z6Z7 4374 aaKnown RBP1.67□□□□□ -2.14
XRCC4-203ENST00000396027 DYNC2H1Q8NCM8 4307 aaKnown RBP1.67□□□□□ -2.14
XRCC4-203ENST00000396027 DMBT1Q9UGM3 2413 aaPredicted RBP1.67□□□□□ -2.14
XRCC4-203ENST00000396027 PKD1L1Q8TDX9 2849 aa1.67□□□□□ -2.14
XRCC4-203ENST00000396027 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
XRCC4-203ENST00000396027 TEP1Q99973 2627 aaKnown RBP1.66□□□□□ -2.14
XRCC4-203ENST00000396027 TENM3Q9P273 2699 aa1.66□□□□□ -2.14
XRCC4-203ENST00000396027 DNAH9Q9NYC9 4486 aa1.66□□□□□ -2.14
XRCC4-203ENST00000396027 KRTAP13-2Q52LG2 175 aa1.66□□□□□ -2.14
XRCC4-203ENST00000396027 ATRQ13535 2644 aa1.65□□□□□ -2.14
XRCC4-203ENST00000396027 TGP01266 2768 aa1.65□□□□□ -2.15
XRCC4-203ENST00000396027 PLECQ15149 4684 aaKnown RBP1.65□□□□□ -2.15
XRCC4-203ENST00000396027 NSD1Q96L73 2696 aaPredicted RBP1.65□□□□□ -2.15
XRCC4-203ENST00000396027 FBN1P35555 2871 aaKnown RBP1.64□□□□□ -2.15
XRCC4-203ENST00000396027 HECTD1Q9ULT8 2610 aa1.63□□□□□ -2.15
XRCC4-203ENST00000396027 MAST4O15021 2626 aa1.62□□□□□ -2.15
XRCC4-203ENST00000396027 DNAH7Q8WXX0 4024 aa1.62□□□□□ -2.15
XRCC4-203ENST00000396027 FLNBO75369 2602 aaKnown RBP1.62□□□□□ -2.15
XRCC4-203ENST00000396027 HECTD4Q9Y4D8 3996 aa1.62□□□□□ -2.15
XRCC4-203ENST00000396027 NBEAL1Q6ZS30 2694 aa1.62□□□□□ -2.15
XRCC4-203ENST00000396027 DNAH8Q96JB1 4490 aa1.62□□□□□ -2.15
XRCC4-203ENST00000396027 KRTAP1-4P0C5Y4 121 aa1.61□□□□□ -2.15
XRCC4-203ENST00000396027 BAHCC1Q9P281 2608 aa1.61□□□□□ -2.15
XRCC4-203ENST00000396027 DNAH17Q9UFH2 4485 aa1.61□□□□□ -2.15
XRCC4-203ENST00000396027 VPS13DQ5THJ4 4388 aa1.6□□□□□ -2.15
XRCC4-203ENST00000396027 DNAH2Q9P225 4427 aa1.59□□□□□ -2.15
XRCC4-203ENST00000396027 CSMD3Q7Z407 3707 aa1.59□□□□□ -2.15
XRCC4-203ENST00000396027 FRAS1Q86XX4 4008 aa1.59□□□□□ -2.16
XRCC4-203ENST00000396027 STAB1Q9NY15 2570 aa1.58□□□□□ -2.16
XRCC4-203ENST00000396027 STARD9Q9P2P6 4700 aa1.57□□□□□ -2.16
XRCC4-203ENST00000396027 NOTCH1P46531 2555 aa1.57□□□□□ -2.16
XRCC4-203ENST00000396027 DNAH11Q96DT5 4516 aa1.57□□□□□ -2.16
XRCC4-203ENST00000396027 DNAH5Q8TE73 4624 aa1.56□□□□□ -2.16
XRCC4-203ENST00000396027 COL7A1Q02388 2944 aa1.56□□□□□ -2.16
XRCC4-203ENST00000396027 STAB2Q8WWQ8 2551 aa1.56□□□□□ -2.16
XRCC4-203ENST00000396027 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
XRCC4-203ENST00000396027 PRKDCP78527 4128 aaKnown RBP1.55□□□□□ -2.16
XRCC4-203ENST00000396027 LRP1BQ9NZR2 4599 aa1.55□□□□□ -2.16
XRCC4-203ENST00000396027 KMT2AQ03164 3969 aa1.54□□□□□ -2.16
XRCC4-203ENST00000396027 SACSQ9NZJ4 4579 aa1.54□□□□□ -2.16
XRCC4-203ENST00000396027 MGAM2Q2M2H8 2515 aa1.52□□□□□ -2.17
XRCC4-203ENST00000396027 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
XRCC4-203ENST00000396027 PKD1P98161 4303 aa1.52□□□□□ -2.17
XRCC4-203ENST00000396027 DNAH6Q9C0G6 4158 aa1.51□□□□□ -2.17
XRCC4-203ENST00000396027 FAT2Q9NYQ8 4349 aa1.49□□□□□ -2.17
XRCC4-203ENST00000396027 KRTAP10-10P60014 251 aa1.48□□□□□ -2.17
XRCC4-203ENST00000396027 HYDINQ4G0P3 5121 aa1.48□□□□□ -2.17
XRCC4-203ENST00000396027 DYNC1H1Q14204 4646 aaKnown RBP1.47□□□□□ -2.17
XRCC4-203ENST00000396027 VPS13BQ7Z7G8 4022 aa1.47□□□□□ -2.17
XRCC4-203ENST00000396027 APOBP04114 4563 aaKnown RBP1.46□□□□□ -2.18
XRCC4-203ENST00000396027 KRTAP10-4P60372 401 aaPredicted RBP1.45□□□□□ -2.18
XRCC4-203ENST00000396027 DNHD1Q96M86 4753 aa1.45□□□□□ -2.18
XRCC4-203ENST00000396027 SMR3BP02814 79 aaPredicted RBP1.45□□□□□ -2.18
XRCC4-203ENST00000396027 KRTAP8-1Q8IUC2 63 aa1.45□□□□□ -2.18
XRCC4-203ENST00000396027 FAT3Q8TDW7 4589 aa1.44□□□□□ -2.18
XRCC4-203ENST00000396027 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
XRCC4-203ENST00000396027 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
XRCC4-203ENST00000396027 FAT1Q14517 4588 aa1.44□□□□□ -2.18
XRCC4-203ENST00000396027 LRP1Q07954 4544 aaKnown RBP1.42□□□□□ -2.18
XRCC4-203ENST00000396027 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
XRCC4-203ENST00000396027 M0R2T5 61 aa1.4□□□□□ -2.18
XRCC4-203ENST00000396027 HSPG2P98160 4391 aa1.39□□□□□ -2.19
XRCC4-203ENST00000396027 TNXBP22105 4242 aa1.38□□□□□ -2.19
XRCC4-203ENST00000396027 MYCBP2O75592 4640 aa1.37□□□□□ -2.19
XRCC4-203ENST00000396027 RYR2Q92736 4967 aa1.37□□□□□ -2.19
XRCC4-203ENST00000396027 KRTAP21-3Q3LHN1 58 aa1.35□□□□□ -2.19
XRCC4-203ENST00000396027 KRTAP2-3P0C7H8 128 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms