RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
COL15A1-201ENST00000375001 KRTAP10-5P60370 271 aa8.4□□□□□ -1.07
COL15A1-201ENST00000375001 ZNF469Q96JG9 3925 aaPredicted RBP8.38□□□□□ -1.07
COL15A1-201ENST00000375001 AKAP9Q99996 3911 aa8.33□□□□□ -1.08
COL15A1-201ENST00000375001 DNAH9Q9NYC9 4486 aa8.29□□□□□ -1.08
COL15A1-201ENST00000375001 DNAH5Q8TE73 4624 aa8.25□□□□□ -1.09
COL15A1-201ENST00000375001 DNAH1Q9P2D7 4330 aa8.24□□□□□ -1.09
COL15A1-201ENST00000375001 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
COL15A1-201ENST00000375001 PLECQ15149 4684 aaKnown RBP8.16□□□□□ -1.1
COL15A1-201ENST00000375001 ALMS1Q8TCU4 4167 aa8.14□□□□□ -1.11
COL15A1-201ENST00000375001 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
COL15A1-201ENST00000375001 DNAH17Q9UFH2 4485 aa7.99□□□□□ -1.13
COL15A1-201ENST00000375001 DNAH2Q9P225 4427 aa7.98□□□□□ -1.13
COL15A1-201ENST00000375001 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
COL15A1-201ENST00000375001 VPS13DQ5THJ4 4388 aa7.93□□□□□ -1.14
COL15A1-201ENST00000375001 KRTAP8-1Q8IUC2 63 aa7.89□□□□□ -1.15
COL15A1-201ENST00000375001 FAT1Q14517 4588 aa7.89□□□□□ -1.15
COL15A1-201ENST00000375001 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
COL15A1-201ENST00000375001 DYNC1H1Q14204 4646 aaKnown RBP7.81□□□□□ -1.16
COL15A1-201ENST00000375001 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.16
COL15A1-201ENST00000375001 STARD9Q9P2P6 4700 aa7.77□□□□□ -1.17
COL15A1-201ENST00000375001 DNHD1Q96M86 4753 aa7.76□□□□□ -1.17
COL15A1-201ENST00000375001 DNAH3Q8TD57 4116 aa7.68□□□□□ -1.18
COL15A1-201ENST00000375001 SACSQ9NZJ4 4579 aa7.68□□□□□ -1.18
COL15A1-201ENST00000375001 ANK2Q01484 3957 aa7.66□□□□□ -1.18
COL15A1-201ENST00000375001 MT1HP80294 61 aa7.62□□□□□ -1.19
COL15A1-201ENST00000375001 SPRR2GQ9BYE4 73 aa7.62□□□□□ -1.19
COL15A1-201ENST00000375001 RYR1P21817 5038 aa7.6□□□□□ -1.19
COL15A1-201ENST00000375001 MT2AP02795 61 aa7.6□□□□□ -1.19
COL15A1-201ENST00000375001 DYNC2H1Q8NCM8 4307 aaKnown RBP7.59□□□□□ -1.19
COL15A1-201ENST00000375001 FAT2Q9NYQ8 4349 aa7.55□□□□□ -1.2
COL15A1-201ENST00000375001 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
COL15A1-201ENST00000375001 LCE3CQ5T5A8 94 aa7.52□□□□□ -1.21
COL15A1-201ENST00000375001 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.21
COL15A1-201ENST00000375001 KMT2AQ03164 3969 aa7.52□□□□□ -1.21
COL15A1-201ENST00000375001 VPS13BQ7Z7G8 4022 aa7.49□□□□□ -1.21
COL15A1-201ENST00000375001 MT1FP04733 61 aa7.48□□□□□ -1.21
COL15A1-201ENST00000375001 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
COL15A1-201ENST00000375001 PRKDCP78527 4128 aaKnown RBP7.43□□□□□ -1.22
COL15A1-201ENST00000375001 LYSTQ99698 3801 aa7.42□□□□□ -1.22
COL15A1-201ENST00000375001 KRTAP10-7P60409 375 aaPredicted RBP7.42□□□□□ -1.22
COL15A1-201ENST00000375001 FRAS1Q86XX4 4008 aa7.39□□□□□ -1.23
COL15A1-201ENST00000375001 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
COL15A1-201ENST00000375001 KRTAP17-1Q9BYP8 105 aa7.21□□□□□ -1.26
COL15A1-201ENST00000375001 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
COL15A1-201ENST00000375001 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
COL15A1-201ENST00000375001 DNAH6Q9C0G6 4158 aa7.18□□□□□ -1.26
COL15A1-201ENST00000375001 KRTAP12-4P60329 112 aa7.18□□□□□ -1.26
COL15A1-201ENST00000375001 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.26
COL15A1-201ENST00000375001 RYR3Q15413 4870 aa7.15□□□□□ -1.27
COL15A1-201ENST00000375001 HECTD4Q9Y4D8 3996 aa7.14□□□□□ -1.27
COL15A1-201ENST00000375001 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
COL15A1-201ENST00000375001 CMYA5Q8N3K9 4069 aa7.12□□□□□ -1.27
COL15A1-201ENST00000375001 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
COL15A1-201ENST00000375001 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
COL15A1-201ENST00000375001 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
COL15A1-201ENST00000375001 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
COL15A1-201ENST00000375001 MT1XP80297 61 aa6.99□□□□□ -1.29
COL15A1-201ENST00000375001 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
COL15A1-201ENST00000375001 RYR2Q92736 4967 aa6.91□□□□□ -1.3
COL15A1-201ENST00000375001 LRP2P98164 4655 aa6.89□□□□□ -1.31
COL15A1-201ENST00000375001 MT1GP13640 62 aa6.89□□□□□ -1.31
COL15A1-201ENST00000375001 MT1BP07438 61 aa6.88□□□□□ -1.31
COL15A1-201ENST00000375001 SPRR2EP22531 72 aa6.8□□□□□ -1.32
COL15A1-201ENST00000375001 SPRR2BP35325 72 aa6.8□□□□□ -1.32
COL15A1-201ENST00000375001 SPRR2AP35326 72 aa6.8□□□□□ -1.32
COL15A1-201ENST00000375001 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
COL15A1-201ENST00000375001 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
COL15A1-201ENST00000375001 LCE3DQ9BYE3 92 aa6.77□□□□□ -1.33
COL15A1-201ENST00000375001 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
COL15A1-201ENST00000375001 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
COL15A1-201ENST00000375001 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
COL15A1-201ENST00000375001 PKHD1P08F94 4074 aa6.69□□□□□ -1.34
COL15A1-201ENST00000375001 LCE3EQ5T5B0 92 aa6.68□□□□□ -1.34
COL15A1-201ENST00000375001 HSPG2P98160 4391 aa6.66□□□□□ -1.34
COL15A1-201ENST00000375001 LPAP08519 4548 aa6.65□□□□□ -1.34
COL15A1-201ENST00000375001 PKD1P98161 4303 aa6.65□□□□□ -1.35
COL15A1-201ENST00000375001 HERC2O95714 4834 aa6.64□□□□□ -1.35
COL15A1-201ENST00000375001 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
COL15A1-201ENST00000375001 SPRR2DP22532 72 aa6.6□□□□□ -1.35
COL15A1-201ENST00000375001 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
COL15A1-201ENST00000375001 LCE2BO14633 110 aa6.54□□□□□ -1.36
COL15A1-201ENST00000375001 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
COL15A1-201ENST00000375001 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
COL15A1-201ENST00000375001 PCLOQ9Y6V0 5065 aa6.44□□□□□ -1.38
COL15A1-201ENST00000375001 HERC1Q15751 4861 aa6.43□□□□□ -1.38
COL15A1-201ENST00000375001 TNXBP22105 4242 aa6.38□□□□□ -1.39
COL15A1-201ENST00000375001 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
COL15A1-201ENST00000375001 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
COL15A1-201ENST00000375001 PRM1P04553 51 aa6.34□□□□□ -1.39
COL15A1-201ENST00000375001 MT1LQ93083 61 aa6.32□□□□□ -1.4
COL15A1-201ENST00000375001 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
COL15A1-201ENST00000375001 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
COL15A1-201ENST00000375001 MT1EP04732 61 aa6.24□□□□□ -1.41
COL15A1-201ENST00000375001 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
COL15A1-201ENST00000375001 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
COL15A1-201ENST00000375001 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
COL15A1-201ENST00000375001 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
COL15A1-201ENST00000375001 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
COL15A1-201ENST00000375001 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms