RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DNAH5Q8TE73 4624 aa5.23□□□□□ -1.57
DEPDC1-201ENST00000370966 ALMS1Q8TCU4 4167 aa5.19□□□□□ -1.58
DEPDC1-201ENST00000370966 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
DEPDC1-201ENST00000370966 CSMD3Q7Z407 3707 aa5.18□□□□□ -1.58
DEPDC1-201ENST00000370966 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
DEPDC1-201ENST00000370966 PLECQ15149 4684 aaKnown RBP5.14□□□□□ -1.59
DEPDC1-201ENST00000370966 DNAH11Q96DT5 4516 aa5.13□□□□□ -1.59
DEPDC1-201ENST00000370966 DNAH10Q8IVF4 4471 aa5.11□□□□□ -1.59
DEPDC1-201ENST00000370966 INE1O15225 51 aa5.11□□□□□ -1.59
DEPDC1-201ENST00000370966 LYSTQ99698 3801 aa5.1□□□□□ -1.59
DEPDC1-201ENST00000370966 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-201ENST00000370966 DNHD1Q96M86 4753 aa5.08□□□□□ -1.6
DEPDC1-201ENST00000370966 DYNC2H1Q8NCM8 4307 aaKnown RBP5.07□□□□□ -1.6
DEPDC1-201ENST00000370966 VPS13DQ5THJ4 4388 aa5.07□□□□□ -1.6
DEPDC1-201ENST00000370966 DNAH17Q9UFH2 4485 aa5.05□□□□□ -1.6
DEPDC1-201ENST00000370966 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
DEPDC1-201ENST00000370966 DYNC1H1Q14204 4646 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-201ENST00000370966 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
DEPDC1-201ENST00000370966 FAT1Q14517 4588 aa4.96□□□□□ -1.62
DEPDC1-201ENST00000370966 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
DEPDC1-201ENST00000370966 LRP1BQ9NZR2 4599 aa4.94□□□□□ -1.62
DEPDC1-201ENST00000370966 DNAH7Q8WXX0 4024 aa4.93□□□□□ -1.62
DEPDC1-201ENST00000370966 DNAH2Q9P225 4427 aa4.93□□□□□ -1.62
DEPDC1-201ENST00000370966 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
DEPDC1-201ENST00000370966 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
DEPDC1-201ENST00000370966 DNAH8Q96JB1 4490 aa4.88□□□□□ -1.63
DEPDC1-201ENST00000370966 RYR1P21817 5038 aa4.87□□□□□ -1.63
DEPDC1-201ENST00000370966 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
DEPDC1-201ENST00000370966 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.64
DEPDC1-201ENST00000370966 FRAS1Q86XX4 4008 aa4.82□□□□□ -1.64
DEPDC1-201ENST00000370966 MT1HP80294 61 aa4.82□□□□□ -1.64
DEPDC1-201ENST00000370966 FAT2Q9NYQ8 4349 aa4.8□□□□□ -1.64
DEPDC1-201ENST00000370966 MT2AP02795 61 aa4.79□□□□□ -1.64
DEPDC1-201ENST00000370966 HECTD4Q9Y4D8 3996 aa4.76□□□□□ -1.65
DEPDC1-201ENST00000370966 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
DEPDC1-201ENST00000370966 DNAH6Q9C0G6 4158 aa4.76□□□□□ -1.65
DEPDC1-201ENST00000370966 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-201ENST00000370966 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.66
DEPDC1-201ENST00000370966 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
DEPDC1-201ENST00000370966 MT1FP04733 61 aa4.68□□□□□ -1.66
DEPDC1-201ENST00000370966 KMT2AQ03164 3969 aa4.67□□□□□ -1.66
DEPDC1-201ENST00000370966 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
DEPDC1-201ENST00000370966 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.66
DEPDC1-201ENST00000370966 PKD1P98161 4303 aa4.63□□□□□ -1.67
DEPDC1-201ENST00000370966 RYR3Q15413 4870 aa4.61□□□□□ -1.67
DEPDC1-201ENST00000370966 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
DEPDC1-201ENST00000370966 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
DEPDC1-201ENST00000370966 RYR2Q92736 4967 aa4.56□□□□□ -1.68
DEPDC1-201ENST00000370966 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
DEPDC1-201ENST00000370966 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
DEPDC1-201ENST00000370966 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
DEPDC1-201ENST00000370966 LRP1Q07954 4544 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-201ENST00000370966 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
DEPDC1-201ENST00000370966 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
DEPDC1-201ENST00000370966 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
DEPDC1-201ENST00000370966 KRTAP19-5Q3LI72 72 aa4.49□□□□□ -1.69
DEPDC1-201ENST00000370966 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
DEPDC1-201ENST00000370966 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
DEPDC1-201ENST00000370966 HERC2O95714 4834 aa4.4□□□□□ -1.71
DEPDC1-201ENST00000370966 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-201ENST00000370966 LRP2P98164 4655 aa4.36□□□□□ -1.71
DEPDC1-201ENST00000370966 MT1XP80297 61 aa4.35□□□□□ -1.71
DEPDC1-201ENST00000370966 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
DEPDC1-201ENST00000370966 MT1BP07438 61 aa4.34□□□□□ -1.71
DEPDC1-201ENST00000370966 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
DEPDC1-201ENST00000370966 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
DEPDC1-201ENST00000370966 HSPG2P98160 4391 aa4.26□□□□□ -1.73
DEPDC1-201ENST00000370966 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
DEPDC1-201ENST00000370966 BIRC6Q9NR09 4857 aa4.25□□□□□ -1.73
DEPDC1-201ENST00000370966 TNXBP22105 4242 aa4.24□□□□□ -1.73
DEPDC1-201ENST00000370966 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
DEPDC1-201ENST00000370966 HERC1Q15751 4861 aa4.22□□□□□ -1.73
DEPDC1-201ENST00000370966 PCLOQ9Y6V0 5065 aa4.21□□□□□ -1.74
DEPDC1-201ENST00000370966 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
DEPDC1-201ENST00000370966 KMT2CQ8NEZ4 4911 aaKnown RBP4.12□□□□□ -1.75
DEPDC1-201ENST00000370966 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
DEPDC1-201ENST00000370966 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
DEPDC1-201ENST00000370966 MUC17Q685J3 4493 aa4.1□□□□□ -1.75
DEPDC1-201ENST00000370966 MT1GP13640 62 aa4.09□□□□□ -1.75
DEPDC1-201ENST00000370966 LPAP08519 4548 aa4.04□□□□□ -1.76
DEPDC1-201ENST00000370966 LCE2BO14633 110 aa4.01□□□□□ -1.77
DEPDC1-201ENST00000370966 SPRR2EP22531 72 aa4.01□□□□□ -1.77
DEPDC1-201ENST00000370966 SPRR2BP35325 72 aa4.01□□□□□ -1.77
DEPDC1-201ENST00000370966 SPRR2AP35326 72 aa4.01□□□□□ -1.77
DEPDC1-201ENST00000370966 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1-201ENST00000370966 ABCA13Q86UQ4 5058 aa3.99□□□□□ -1.77
DEPDC1-201ENST00000370966 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
DEPDC1-201ENST00000370966 EPPK1P58107 5090 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-201ENST00000370966 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
DEPDC1-201ENST00000370966 MT1LQ93083 61 aa3.94□□□□□ -1.78
DEPDC1-201ENST00000370966 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
DEPDC1-201ENST00000370966 MT1EP04732 61 aa3.91□□□□□ -1.78
DEPDC1-201ENST00000370966 SPRR2DP22532 72 aa3.88□□□□□ -1.79
DEPDC1-201ENST00000370966 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-201ENST00000370966 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
DEPDC1-201ENST00000370966 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
DEPDC1-201ENST00000370966 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
DEPDC1-201ENST00000370966 UBR4Q5T4S7 5183 aa3.81□□□□□ -1.8
DEPDC1-201ENST00000370966 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
DEPDC1-201ENST00000370966 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms