RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 TRRAPQ9Y4A5 3859 aa4.57□□□□□ -1.68
RPRD2-202ENST00000369068 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
RPRD2-202ENST00000369068 DNAH3Q8TD57 4116 aa4.5□□□□□ -1.69
RPRD2-202ENST00000369068 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
RPRD2-202ENST00000369068 DNHD1Q96M86 4753 aa4.43□□□□□ -1.7
RPRD2-202ENST00000369068 LYSTQ99698 3801 aa4.4□□□□□ -1.7
RPRD2-202ENST00000369068 HUWE1Q7Z6Z7 4374 aaKnown RBP4.36□□□□□ -1.71
RPRD2-202ENST00000369068 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
RPRD2-202ENST00000369068 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
RPRD2-202ENST00000369068 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
RPRD2-202ENST00000369068 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
RPRD2-202ENST00000369068 ALMS1Q8TCU4 4167 aa4.29□□□□□ -1.72
RPRD2-202ENST00000369068 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
RPRD2-202ENST00000369068 DNAH5Q8TE73 4624 aa4.23□□□□□ -1.73
RPRD2-202ENST00000369068 FAT1Q14517 4588 aa4.22□□□□□ -1.73
RPRD2-202ENST00000369068 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
RPRD2-202ENST00000369068 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
RPRD2-202ENST00000369068 DNAH2Q9P225 4427 aa4.22□□□□□ -1.73
RPRD2-202ENST00000369068 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
RPRD2-202ENST00000369068 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
RPRD2-202ENST00000369068 DNAH1Q9P2D7 4330 aa4.18□□□□□ -1.74
RPRD2-202ENST00000369068 KRTAP4-1Q9BYQ7 146 aa4.17□□□□□ -1.74
RPRD2-202ENST00000369068 PLECQ15149 4684 aaKnown RBP4.17□□□□□ -1.74
RPRD2-202ENST00000369068 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
RPRD2-202ENST00000369068 DYNC2H1Q8NCM8 4307 aaKnown RBP4.13□□□□□ -1.75
RPRD2-202ENST00000369068 DNAH8Q96JB1 4490 aa4.11□□□□□ -1.75
RPRD2-202ENST00000369068 DNAH9Q9NYC9 4486 aa4.09□□□□□ -1.75
RPRD2-202ENST00000369068 MT2AP02795 61 aa4.07□□□□□ -1.76
RPRD2-202ENST00000369068 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
RPRD2-202ENST00000369068 MT1HP80294 61 aa4.04□□□□□ -1.76
RPRD2-202ENST00000369068 HYDINQ4G0P3 5121 aa4.04□□□□□ -1.76
RPRD2-202ENST00000369068 DNAH17Q9UFH2 4485 aa4.03□□□□□ -1.76
RPRD2-202ENST00000369068 KMT2CQ8NEZ4 4911 aaKnown RBP4.03□□□□□ -1.76
RPRD2-202ENST00000369068 RYR3Q15413 4870 aa4.03□□□□□ -1.76
RPRD2-202ENST00000369068 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
RPRD2-202ENST00000369068 HECTD4Q9Y4D8 3996 aa4.02□□□□□ -1.77
RPRD2-202ENST00000369068 FAT2Q9NYQ8 4349 aa3.99□□□□□ -1.77
RPRD2-202ENST00000369068 MT1FP04733 61 aa3.98□□□□□ -1.77
RPRD2-202ENST00000369068 VPS13DQ5THJ4 4388 aa3.98□□□□□ -1.77
RPRD2-202ENST00000369068 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
RPRD2-202ENST00000369068 PKD1P98161 4303 aa3.96□□□□□ -1.78
RPRD2-202ENST00000369068 DYNC1H1Q14204 4646 aaKnown RBP3.95□□□□□ -1.78
RPRD2-202ENST00000369068 KMT2AQ03164 3969 aa3.95□□□□□ -1.78
RPRD2-202ENST00000369068 STARD9Q9P2P6 4700 aa3.94□□□□□ -1.78
RPRD2-202ENST00000369068 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
RPRD2-202ENST00000369068 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
RPRD2-202ENST00000369068 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
RPRD2-202ENST00000369068 DNAH6Q9C0G6 4158 aa3.91□□□□□ -1.78
RPRD2-202ENST00000369068 RYR1P21817 5038 aa3.89□□□□□ -1.79
RPRD2-202ENST00000369068 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
RPRD2-202ENST00000369068 APOBP04114 4563 aaKnown RBP3.87□□□□□ -1.79
RPRD2-202ENST00000369068 PKHD1P08F94 4074 aa3.85□□□□□ -1.79
RPRD2-202ENST00000369068 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
RPRD2-202ENST00000369068 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
RPRD2-202ENST00000369068 MYCBP2O75592 4640 aa3.81□□□□□ -1.8
RPRD2-202ENST00000369068 RYR2Q92736 4967 aa3.81□□□□□ -1.8
RPRD2-202ENST00000369068 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
RPRD2-202ENST00000369068 SPRR2FQ96RM1 72 aa3.78□□□□□ -1.8
RPRD2-202ENST00000369068 FAT3Q8TDW7 4589 aa3.78□□□□□ -1.81
RPRD2-202ENST00000369068 MT1XP80297 61 aa3.77□□□□□ -1.81
RPRD2-202ENST00000369068 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
RPRD2-202ENST00000369068 LRP1Q07954 4544 aaKnown RBP3.74□□□□□ -1.81
RPRD2-202ENST00000369068 HSPG2P98160 4391 aa3.72□□□□□ -1.81
RPRD2-202ENST00000369068 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
RPRD2-202ENST00000369068 MT1BP07438 61 aa3.69□□□□□ -1.82
RPRD2-202ENST00000369068 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
RPRD2-202ENST00000369068 HERC1Q15751 4861 aa3.67□□□□□ -1.82
RPRD2-202ENST00000369068 LCE2DQ5TA82 110 aaPredicted RBP3.64□□□□□ -1.83
RPRD2-202ENST00000369068 KIAA1109Q2LD37 5005 aa3.64□□□□□ -1.83
RPRD2-202ENST00000369068 MT1GP13640 62 aa3.63□□□□□ -1.83
RPRD2-202ENST00000369068 PCLOQ9Y6V0 5065 aa3.61□□□□□ -1.83
RPRD2-202ENST00000369068 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
RPRD2-202ENST00000369068 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
RPRD2-202ENST00000369068 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
RPRD2-202ENST00000369068 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
RPRD2-202ENST00000369068 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
RPRD2-202ENST00000369068 KRTAP17-1Q9BYP8 105 aa3.56□□□□□ -1.84
RPRD2-202ENST00000369068 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
RPRD2-202ENST00000369068 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
RPRD2-202ENST00000369068 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
RPRD2-202ENST00000369068 ABCA13Q86UQ4 5058 aa3.53□□□□□ -1.84
RPRD2-202ENST00000369068 LRP2P98164 4655 aa3.5□□□□□ -1.85
RPRD2-202ENST00000369068 MT1LQ93083 61 aa3.47□□□□□ -1.85
RPRD2-202ENST00000369068 SPRR2EP22531 72 aa3.44□□□□□ -1.86
RPRD2-202ENST00000369068 SPRR2BP35325 72 aa3.44□□□□□ -1.86
RPRD2-202ENST00000369068 SPRR2AP35326 72 aa3.44□□□□□ -1.86
RPRD2-202ENST00000369068 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
RPRD2-202ENST00000369068 TNXBP22105 4242 aa3.43□□□□□ -1.86
RPRD2-202ENST00000369068 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
RPRD2-202ENST00000369068 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
RPRD2-202ENST00000369068 LCE2BO14633 110 aa3.4□□□□□ -1.87
RPRD2-202ENST00000369068 MT1EP04732 61 aa3.39□□□□□ -1.87
RPRD2-202ENST00000369068 HERC2O95714 4834 aa3.39□□□□□ -1.87
RPRD2-202ENST00000369068 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
RPRD2-202ENST00000369068 MUC17Q685J3 4493 aa3.33□□□□□ -1.88
RPRD2-202ENST00000369068 SPRR2DP22532 72 aa3.33□□□□□ -1.88
RPRD2-202ENST00000369068 PRM1P04553 51 aa3.32□□□□□ -1.88
RPRD2-202ENST00000369068 LPAP08519 4548 aa3.29□□□□□ -1.88
RPRD2-202ENST00000369068 MT1MQ8N339 61 aa3.26□□□□□ -1.89
RPRD2-202ENST00000369068 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms