RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 DNAH1Q9P2D7 4330 aa6.99□□□□□ -1.29
PTPN11-201ENST00000351677 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
PTPN11-201ENST00000351677 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
PTPN11-201ENST00000351677 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
PTPN11-201ENST00000351677 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
PTPN11-201ENST00000351677 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
PTPN11-201ENST00000351677 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
PTPN11-201ENST00000351677 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
PTPN11-201ENST00000351677 VPS13DQ5THJ4 4388 aa6.75□□□□□ -1.33
PTPN11-201ENST00000351677 DNAH17Q9UFH2 4485 aa6.75□□□□□ -1.33
PTPN11-201ENST00000351677 INE1O15225 51 aa6.73□□□□□ -1.33
PTPN11-201ENST00000351677 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
PTPN11-201ENST00000351677 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
PTPN11-201ENST00000351677 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
PTPN11-201ENST00000351677 DNHD1Q96M86 4753 aa6.63□□□□□ -1.35
PTPN11-201ENST00000351677 STARD9Q9P2P6 4700 aa6.63□□□□□ -1.35
PTPN11-201ENST00000351677 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
PTPN11-201ENST00000351677 DNAH3Q8TD57 4116 aa6.61□□□□□ -1.35
PTPN11-201ENST00000351677 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
PTPN11-201ENST00000351677 FAT1Q14517 4588 aa6.59□□□□□ -1.36
PTPN11-201ENST00000351677 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
PTPN11-201ENST00000351677 ANK2Q01484 3957 aa6.51□□□□□ -1.37
PTPN11-201ENST00000351677 MT1HP80294 61 aa6.5□□□□□ -1.37
PTPN11-201ENST00000351677 FAT2Q9NYQ8 4349 aa6.5□□□□□ -1.37
PTPN11-201ENST00000351677 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
PTPN11-201ENST00000351677 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
PTPN11-201ENST00000351677 SACSQ9NZJ4 4579 aa6.46□□□□□ -1.37
PTPN11-201ENST00000351677 PRKDCP78527 4128 aaKnown RBP6.45□□□□□ -1.38
PTPN11-201ENST00000351677 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
PTPN11-201ENST00000351677 MT2AP02795 61 aa6.41□□□□□ -1.38
PTPN11-201ENST00000351677 RYR1P21817 5038 aa6.39□□□□□ -1.39
PTPN11-201ENST00000351677 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
PTPN11-201ENST00000351677 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
PTPN11-201ENST00000351677 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
PTPN11-201ENST00000351677 MT1FP04733 61 aa6.31□□□□□ -1.4
PTPN11-201ENST00000351677 LYSTQ99698 3801 aa6.31□□□□□ -1.4
PTPN11-201ENST00000351677 APOBP04114 4563 aaKnown RBP6.3□□□□□ -1.4
PTPN11-201ENST00000351677 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
PTPN11-201ENST00000351677 CMYA5Q8N3K9 4069 aa6.22□□□□□ -1.41
PTPN11-201ENST00000351677 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
PTPN11-201ENST00000351677 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
PTPN11-201ENST00000351677 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
PTPN11-201ENST00000351677 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
PTPN11-201ENST00000351677 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
PTPN11-201ENST00000351677 HECTD4Q9Y4D8 3996 aa6.09□□□□□ -1.43
PTPN11-201ENST00000351677 RYR3Q15413 4870 aa6.06□□□□□ -1.44
PTPN11-201ENST00000351677 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
PTPN11-201ENST00000351677 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
PTPN11-201ENST00000351677 KIAA1109Q2LD37 5005 aa5.99□□□□□ -1.45
PTPN11-201ENST00000351677 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
PTPN11-201ENST00000351677 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
PTPN11-201ENST00000351677 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
PTPN11-201ENST00000351677 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
PTPN11-201ENST00000351677 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.47
PTPN11-201ENST00000351677 RYR2Q92736 4967 aa5.85□□□□□ -1.47
PTPN11-201ENST00000351677 MT1XP80297 61 aa5.83□□□□□ -1.48
PTPN11-201ENST00000351677 HYDINQ4G0P3 5121 aa5.81□□□□□ -1.48
PTPN11-201ENST00000351677 HSPG2P98160 4391 aa5.79□□□□□ -1.48
PTPN11-201ENST00000351677 MT1BP07438 61 aa5.77□□□□□ -1.49
PTPN11-201ENST00000351677 KRTAP9-8Q9BYQ0 159 aa5.76□□□□□ -1.49
PTPN11-201ENST00000351677 PKHD1P08F94 4074 aa5.76□□□□□ -1.49
PTPN11-201ENST00000351677 LRP2P98164 4655 aa5.74□□□□□ -1.49
PTPN11-201ENST00000351677 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
PTPN11-201ENST00000351677 LPAP08519 4548 aa5.69□□□□□ -1.5
PTPN11-201ENST00000351677 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
PTPN11-201ENST00000351677 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
PTPN11-201ENST00000351677 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
PTPN11-201ENST00000351677 HERC2O95714 4834 aa5.65□□□□□ -1.5
PTPN11-201ENST00000351677 PKD1P98161 4303 aa5.64□□□□□ -1.51
PTPN11-201ENST00000351677 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
PTPN11-201ENST00000351677 MT1GP13640 62 aa5.59□□□□□ -1.51
PTPN11-201ENST00000351677 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
PTPN11-201ENST00000351677 SPRR2EP22531 72 aa5.57□□□□□ -1.52
PTPN11-201ENST00000351677 SPRR2BP35325 72 aa5.57□□□□□ -1.52
PTPN11-201ENST00000351677 SPRR2AP35326 72 aa5.57□□□□□ -1.52
PTPN11-201ENST00000351677 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
PTPN11-201ENST00000351677 TNXBP22105 4242 aa5.5□□□□□ -1.53
PTPN11-201ENST00000351677 KMT2CQ8NEZ4 4911 aaKnown RBP5.49□□□□□ -1.53
PTPN11-201ENST00000351677 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
PTPN11-201ENST00000351677 HERC1Q15751 4861 aa5.46□□□□□ -1.54
PTPN11-201ENST00000351677 KRTAP19-2Q3LHN2 52 aa5.45□□□□□ -1.54
PTPN11-201ENST00000351677 BIRC6Q9NR09 4857 aa5.45□□□□□ -1.54
PTPN11-201ENST00000351677 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
PTPN11-201ENST00000351677 PCLOQ9Y6V0 5065 aa5.42□□□□□ -1.54
PTPN11-201ENST00000351677 LCE2BO14633 110 aa5.37□□□□□ -1.55
PTPN11-201ENST00000351677 SPRR2DP22532 72 aa5.37□□□□□ -1.55
PTPN11-201ENST00000351677 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
PTPN11-201ENST00000351677 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
PTPN11-201ENST00000351677 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
PTPN11-201ENST00000351677 MT1LQ93083 61 aa5.26□□□□□ -1.57
PTPN11-201ENST00000351677 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
PTPN11-201ENST00000351677 MT1EP04732 61 aa5.21□□□□□ -1.57
PTPN11-201ENST00000351677 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.58
PTPN11-201ENST00000351677 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
PTPN11-201ENST00000351677 EPPK1P58107 5090 aaKnown RBP5.1□□□□□ -1.59
PTPN11-201ENST00000351677 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
PTPN11-201ENST00000351677 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
PTPN11-201ENST00000351677 MT1MQ8N339 61 aa5.04□□□□□ -1.6
PTPN11-201ENST00000351677 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
PTPN11-201ENST00000351677 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms