RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
FGD6-201ENST00000343958 VPS13DQ5THJ4 4388 aa3.81□□□□□ -1.8
FGD6-201ENST00000343958 AKAP9Q99996 3911 aa3.79□□□□□ -1.8
FGD6-201ENST00000343958 VWFP04275 2813 aa3.76□□□□□ -1.81
FGD6-201ENST00000343958 LRP1BQ9NZR2 4599 aa3.76□□□□□ -1.81
FGD6-201ENST00000343958 KRTAP4-1Q9BYQ7 146 aa3.75□□□□□ -1.81
FGD6-201ENST00000343958 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
FGD6-201ENST00000343958 FAT1Q14517 4588 aa3.73□□□□□ -1.81
FGD6-201ENST00000343958 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
FGD6-201ENST00000343958 TRRAPQ9Y4A5 3859 aa3.71□□□□□ -1.81
FGD6-201ENST00000343958 ZNF469Q96JG9 3925 aaPredicted RBP3.7□□□□□ -1.82
FGD6-201ENST00000343958 DNHD1Q96M86 4753 aa3.7□□□□□ -1.82
FGD6-201ENST00000343958 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
FGD6-201ENST00000343958 RYR1P21817 5038 aa3.65□□□□□ -1.83
FGD6-201ENST00000343958 HERC1Q15751 4861 aa3.64□□□□□ -1.83
FGD6-201ENST00000343958 STARD9Q9P2P6 4700 aa3.64□□□□□ -1.83
FGD6-201ENST00000343958 FBN3Q75N90 2809 aa3.63□□□□□ -1.83
FGD6-201ENST00000343958 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
FGD6-201ENST00000343958 FRAS1Q86XX4 4008 aa3.61□□□□□ -1.83
FGD6-201ENST00000343958 DYNC2H1Q8NCM8 4307 aaKnown RBP3.61□□□□□ -1.83
FGD6-201ENST00000343958 KRTAP17-1Q9BYP8 105 aa3.58□□□□□ -1.84
FGD6-201ENST00000343958 MT1HP80294 61 aa3.57□□□□□ -1.84
FGD6-201ENST00000343958 FAT3Q8TDW7 4589 aa3.56□□□□□ -1.84
FGD6-201ENST00000343958 PKD1L1Q8TDX9 2849 aa3.56□□□□□ -1.84
FGD6-201ENST00000343958 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
FGD6-201ENST00000343958 MEGF8Q7Z7M0 2845 aa3.54□□□□□ -1.84
FGD6-201ENST00000343958 INE1O15225 51 aa3.54□□□□□ -1.84
FGD6-201ENST00000343958 MT2AP02795 61 aa3.52□□□□□ -1.85
FGD6-201ENST00000343958 SRRM2Q9UQ35 2752 aaKnown RBP3.52□□□□□ -1.85
FGD6-201ENST00000343958 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
FGD6-201ENST00000343958 RYR2Q92736 4967 aa3.52□□□□□ -1.85
FGD6-201ENST00000343958 RYR3Q15413 4870 aa3.49□□□□□ -1.85
FGD6-201ENST00000343958 DNAH3Q8TD57 4116 aa3.48□□□□□ -1.85
FGD6-201ENST00000343958 MT1FP04733 61 aa3.48□□□□□ -1.85
FGD6-201ENST00000343958 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
FGD6-201ENST00000343958 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
FGD6-201ENST00000343958 HYDINQ4G0P3 5121 aa3.41□□□□□ -1.86
FGD6-201ENST00000343958 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
FGD6-201ENST00000343958 HSPG2P98160 4391 aa3.4□□□□□ -1.87
FGD6-201ENST00000343958 PRKDCP78527 4128 aaKnown RBP3.38□□□□□ -1.87
FGD6-201ENST00000343958 ANK2Q01484 3957 aa3.38□□□□□ -1.87
FGD6-201ENST00000343958 LYSTQ99698 3801 aa3.37□□□□□ -1.87
FGD6-201ENST00000343958 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
FGD6-201ENST00000343958 LPAP08519 4548 aa3.36□□□□□ -1.87
FGD6-201ENST00000343958 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
FGD6-201ENST00000343958 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
FGD6-201ENST00000343958 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
FGD6-201ENST00000343958 KMT2AQ03164 3969 aa3.32□□□□□ -1.88
FGD6-201ENST00000343958 CMYA5Q8N3K9 4069 aa3.3□□□□□ -1.88
FGD6-201ENST00000343958 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
FGD6-201ENST00000343958 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
FGD6-201ENST00000343958 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
FGD6-201ENST00000343958 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
FGD6-201ENST00000343958 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
FGD6-201ENST00000343958 PKD1P98161 4303 aa3.23□□□□□ -1.89
FGD6-201ENST00000343958 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
FGD6-201ENST00000343958 HERC2O95714 4834 aa3.22□□□□□ -1.89
FGD6-201ENST00000343958 MT1BP07438 61 aa3.21□□□□□ -1.9
FGD6-201ENST00000343958 MT1XP80297 61 aa3.2□□□□□ -1.9
FGD6-201ENST00000343958 COL7A1Q02388 2944 aa3.2□□□□□ -1.9
FGD6-201ENST00000343958 LCE2CQ5TA81 110 aa3.18□□□□□ -1.9
FGD6-201ENST00000343958 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
FGD6-201ENST00000343958 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
FGD6-201ENST00000343958 ABCA13Q86UQ4 5058 aa3.16□□□□□ -1.9
FGD6-201ENST00000343958 VPS13BQ7Z7G8 4022 aa3.16□□□□□ -1.9
FGD6-201ENST00000343958 DNAH7Q8WXX0 4024 aa3.16□□□□□ -1.9
FGD6-201ENST00000343958 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
FGD6-201ENST00000343958 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
FGD6-201ENST00000343958 KMT2CQ8NEZ4 4911 aaKnown RBP3.1□□□□□ -1.91
FGD6-201ENST00000343958 LRP2P98164 4655 aa3.1□□□□□ -1.91
FGD6-201ENST00000343958 KRTAP9-3Q9BYQ3 159 aa3.09□□□□□ -1.91
FGD6-201ENST00000343958 EPPK1P58107 5090 aaKnown RBP3.09□□□□□ -1.92
FGD6-201ENST00000343958 MUC17Q685J3 4493 aa3.09□□□□□ -1.92
FGD6-201ENST00000343958 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
FGD6-201ENST00000343958 PKHD1L1Q86WI1 4243 aa3.07□□□□□ -1.92
FGD6-201ENST00000343958 MT1GP13640 62 aa3.06□□□□□ -1.92
FGD6-201ENST00000343958 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
FGD6-201ENST00000343958 KRTAP4-7Q9BYR0 210 aa3.01□□□□□ -1.93
FGD6-201ENST00000343958 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
FGD6-201ENST00000343958 LCE3BQ5TA77 95 aa3□□□□□ -1.93
FGD6-201ENST00000343958 SPRR2EP22531 72 aa2.99□□□□□ -1.93
FGD6-201ENST00000343958 SPRR2BP35325 72 aa2.99□□□□□ -1.93
FGD6-201ENST00000343958 SPRR2AP35326 72 aa2.99□□□□□ -1.93
FGD6-201ENST00000343958 TNXBP22105 4242 aa2.98□□□□□ -1.93
FGD6-201ENST00000343958 LCE2BO14633 110 aa2.97□□□□□ -1.93
FGD6-201ENST00000343958 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
FGD6-201ENST00000343958 HECTD4Q9Y4D8 3996 aa2.92□□□□□ -1.94
FGD6-201ENST00000343958 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.95
FGD6-201ENST00000343958 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
FGD6-201ENST00000343958 HMCN2Q8NDA2 5059 aa2.88□□□□□ -1.95
FGD6-201ENST00000343958 MT1LQ93083 61 aa2.87□□□□□ -1.95
FGD6-201ENST00000343958 PKHD1P08F94 4074 aa2.87□□□□□ -1.95
FGD6-201ENST00000343958 SPRR2DP22532 72 aa2.86□□□□□ -1.95
FGD6-201ENST00000343958 MT1EP04732 61 aa2.85□□□□□ -1.95
FGD6-201ENST00000343958 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
FGD6-201ENST00000343958 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
FGD6-201ENST00000343958 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
FGD6-201ENST00000343958 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
FGD6-201ENST00000343958 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
FGD6-201ENST00000343958 UBR4Q5T4S7 5183 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms