RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
FGD6-201ENST00000343958 NISCHQ9Y2I1 1504 aa14.89□□□□□ -0.03
FGD6-201ENST00000343958 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
FGD6-201ENST00000343958 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
FGD6-201ENST00000343958 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
FGD6-201ENST00000343958 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
FGD6-201ENST00000343958 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
FGD6-201ENST00000343958 TTBK1Q5TCY1 1321 aaPredicted RBP13.74□□□□□ -0.21
FGD6-201ENST00000343958 APLP2Q06481 763 aa13.53□□□□□ -0.24
FGD6-201ENST00000343958 RANGAP1P46060 587 aaPredicted RBP13.52□□□□□ -0.25
FGD6-201ENST00000343958 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
FGD6-201ENST00000343958 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
FGD6-201ENST00000343958 CCER1Q8TC90 406 aaPredicted RBP13.34□□□□□ -0.27
FGD6-201ENST00000343958 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
FGD6-201ENST00000343958 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
FGD6-201ENST00000343958 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
FGD6-201ENST00000343958 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
FGD6-201ENST00000343958 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
FGD6-201ENST00000343958 ATP1B4Q9UN42 357 aaPredicted RBP13.23□□□□□ -0.29
FGD6-201ENST00000343958 HRCP23327 699 aa13.16□□□□□ -0.3
FGD6-201ENST00000343958 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
FGD6-201ENST00000343958 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
FGD6-201ENST00000343958 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
FGD6-201ENST00000343958 ITGAEP38570 1179 aa12.93□□□□□ -0.34
FGD6-201ENST00000343958 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
FGD6-201ENST00000343958 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
FGD6-201ENST00000343958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
FGD6-201ENST00000343958 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.36
FGD6-201ENST00000343958 NEFLP07196 543 aa12.77□□□□□ -0.37
FGD6-201ENST00000343958 ABCC9O60706 1549 aa12.73□□□□□ -0.37
FGD6-201ENST00000343958 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
FGD6-201ENST00000343958 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
FGD6-201ENST00000343958 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
FGD6-201ENST00000343958 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
FGD6-201ENST00000343958 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
FGD6-201ENST00000343958 MYT1LQ9UL68 1186 aa12.52□□□□□ -0.41
FGD6-201ENST00000343958 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
FGD6-201ENST00000343958 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
FGD6-201ENST00000343958 BCANQ96GW7 911 aa12.45□□□□□ -0.42
FGD6-201ENST00000343958 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
FGD6-201ENST00000343958 P3H3Q8IVL6 736 aa12.42□□□□□ -0.42
FGD6-201ENST00000343958 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
FGD6-201ENST00000343958 MYT1Q01538 1121 aa12.4□□□□□ -0.43
FGD6-201ENST00000343958 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
FGD6-201ENST00000343958 ARID3CA6NKF2 412 aa12.34□□□□□ -0.43
FGD6-201ENST00000343958 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
FGD6-201ENST00000343958 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
FGD6-201ENST00000343958 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
FGD6-201ENST00000343958 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
FGD6-201ENST00000343958 SCRIBQ14160 1630 aa12.27□□□□□ -0.45
FGD6-201ENST00000343958 ANP32CO43423 234 aa12.26□□□□□ -0.45
FGD6-201ENST00000343958 DAXXQ9UER7 740 aaPredicted RBP12.26□□□□□ -0.45
FGD6-201ENST00000343958 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
FGD6-201ENST00000343958 FBLN2P98095 1184 aa12.24□□□□□ -0.45
FGD6-201ENST00000343958 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
FGD6-201ENST00000343958 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
FGD6-201ENST00000343958 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
FGD6-201ENST00000343958 RSF1Q96T23 1441 aaPredicted RBP12.09□□□□□ -0.47
FGD6-201ENST00000343958 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
FGD6-201ENST00000343958 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
FGD6-201ENST00000343958 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
FGD6-201ENST00000343958 FKBP8Q14318 412 aa12.07□□□□□ -0.48
FGD6-201ENST00000343958 MIER1Q8N108 512 aa12.05□□□□□ -0.48
FGD6-201ENST00000343958 CHIC2Q9UKJ5 165 aa12.05□□□□□ -0.48
FGD6-201ENST00000343958 HIRIP3Q9BW71 556 aaPredicted RBP12.03□□□□□ -0.48
FGD6-201ENST00000343958 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
FGD6-201ENST00000343958 FAM9BQ8IZU0 186 aa11.98□□□□□ -0.49
FGD6-201ENST00000343958 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
FGD6-201ENST00000343958 CLIP1P30622 1438 aa11.96□□□□□ -0.5
FGD6-201ENST00000343958 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
FGD6-201ENST00000343958 BCL11AQ9H165 835 aa11.95□□□□□ -0.5
FGD6-201ENST00000343958 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
FGD6-201ENST00000343958 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
FGD6-201ENST00000343958 IRX6P78412 446 aaPredicted RBP11.91□□□□□ -0.5
FGD6-201ENST00000343958 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
FGD6-201ENST00000343958 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
FGD6-201ENST00000343958 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
FGD6-201ENST00000343958 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
FGD6-201ENST00000343958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.51
FGD6-201ENST00000343958 CCDC180Q9P1Z9 1646 aa11.87□□□□□ -0.51
FGD6-201ENST00000343958 KDM2AQ9Y2K7 1162 aa11.86□□□□□ -0.51
FGD6-201ENST00000343958 CECR2Q9BXF3 1484 aa11.85□□□□□ -0.51
FGD6-201ENST00000343958 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
FGD6-201ENST00000343958 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
FGD6-201ENST00000343958 SENP3-EIF4A1A0A087X0R7 540 aa11.84□□□□□ -0.51
FGD6-201ENST00000343958 MTUS2Q5JR59 1369 aa11.83□□□□□ -0.52
FGD6-201ENST00000343958 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
FGD6-201ENST00000343958 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
FGD6-201ENST00000343958 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
FGD6-201ENST00000343958 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
FGD6-201ENST00000343958 SOGA1O94964 1423 aa11.79□□□□□ -0.52
FGD6-201ENST00000343958 EEA1Q15075 1411 aa11.78□□□□□ -0.52
FGD6-201ENST00000343958 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
FGD6-201ENST00000343958 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
FGD6-201ENST00000343958 SENP3Q9H4L4 574 aaPredicted RBP11.74□□□□□ -0.53
FGD6-201ENST00000343958 RB1CC1Q8TDY2 1594 aa11.74□□□□□ -0.53
FGD6-201ENST00000343958 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
FGD6-201ENST00000343958 CCDC136Q96JN2 1154 aa11.73□□□□□ -0.53
FGD6-201ENST00000343958 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
FGD6-201ENST00000343958 TSPY4P0CV99 314 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms