RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
RIPK4-201ENST00000332512 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
RIPK4-201ENST00000332512 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
RIPK4-201ENST00000332512 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
RIPK4-201ENST00000332512 M0R2T5 61 aa6.75□□□□□ -1.33
RIPK4-201ENST00000332512 VPS13BQ7Z7G8 4022 aa6.72□□□□□ -1.33
RIPK4-201ENST00000332512 DNAH3Q8TD57 4116 aa6.72□□□□□ -1.33
RIPK4-201ENST00000332512 HECTD4Q9Y4D8 3996 aa6.68□□□□□ -1.34
RIPK4-201ENST00000332512 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
RIPK4-201ENST00000332512 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
RIPK4-201ENST00000332512 KRTAP12-1P59990 96 aa6.65□□□□□ -1.35
RIPK4-201ENST00000332512 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
RIPK4-201ENST00000332512 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
RIPK4-201ENST00000332512 KRTAP10-4P60372 401 aaPredicted RBP6.61□□□□□ -1.35
RIPK4-201ENST00000332512 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
RIPK4-201ENST00000332512 LRP1Q07954 4544 aaKnown RBP6.57□□□□□ -1.36
RIPK4-201ENST00000332512 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
RIPK4-201ENST00000332512 PKHD1P08F94 4074 aa6.56□□□□□ -1.36
RIPK4-201ENST00000332512 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
RIPK4-201ENST00000332512 HYDINQ4G0P3 5121 aa6.55□□□□□ -1.36
RIPK4-201ENST00000332512 ALMS1Q8TCU4 4167 aa6.49□□□□□ -1.37
RIPK4-201ENST00000332512 SACSQ9NZJ4 4579 aa6.48□□□□□ -1.37
RIPK4-201ENST00000332512 A0A0A0MQY5 61 aa6.48□□□□□ -1.37
RIPK4-201ENST00000332512 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
RIPK4-201ENST00000332512 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
RIPK4-201ENST00000332512 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
RIPK4-201ENST00000332512 RYR1P21817 5038 aa6.43□□□□□ -1.38
RIPK4-201ENST00000332512 TNP1P09430 55 aa6.39□□□□□ -1.39
RIPK4-201ENST00000332512 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
RIPK4-201ENST00000332512 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
RIPK4-201ENST00000332512 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
RIPK4-201ENST00000332512 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
RIPK4-201ENST00000332512 LRP2P98164 4655 aa6.29□□□□□ -1.4
RIPK4-201ENST00000332512 RYR3Q15413 4870 aa6.26□□□□□ -1.41
RIPK4-201ENST00000332512 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
RIPK4-201ENST00000332512 KMT2CQ8NEZ4 4911 aaKnown RBP6.2□□□□□ -1.42
RIPK4-201ENST00000332512 KRTAP17-1Q9BYP8 105 aa6.17□□□□□ -1.42
RIPK4-201ENST00000332512 PKD1P98161 4303 aa6.16□□□□□ -1.42
RIPK4-201ENST00000332512 HSPG2P98160 4391 aa6.16□□□□□ -1.42
RIPK4-201ENST00000332512 KRTAP10-10P60014 251 aa6.15□□□□□ -1.43
RIPK4-201ENST00000332512 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
RIPK4-201ENST00000332512 LPAP08519 4548 aa6.05□□□□□ -1.44
RIPK4-201ENST00000332512 RYR2Q92736 4967 aa6□□□□□ -1.45
RIPK4-201ENST00000332512 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.47
RIPK4-201ENST00000332512 PKHD1L1Q86WI1 4243 aa5.89□□□□□ -1.47
RIPK4-201ENST00000332512 MUC2Q02817 5179 aa5.83□□□□□ -1.48
RIPK4-201ENST00000332512 HERC2O95714 4834 aa5.81□□□□□ -1.48
RIPK4-201ENST00000332512 TNXBP22105 4242 aa5.76□□□□□ -1.49
RIPK4-201ENST00000332512 ABCA13Q86UQ4 5058 aa5.75□□□□□ -1.49
RIPK4-201ENST00000332512 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
RIPK4-201ENST00000332512 FAT4Q6V0I7 4981 aa5.61□□□□□ -1.51
RIPK4-201ENST00000332512 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
RIPK4-201ENST00000332512 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
RIPK4-201ENST00000332512 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
RIPK4-201ENST00000332512 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
RIPK4-201ENST00000332512 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
RIPK4-201ENST00000332512 HERC1Q15751 4861 aa5.49□□□□□ -1.53
RIPK4-201ENST00000332512 MT1FP04733 61 aa5.45□□□□□ -1.54
RIPK4-201ENST00000332512 MT1HP80294 61 aa5.45□□□□□ -1.54
RIPK4-201ENST00000332512 MT2AP02795 61 aa5.43□□□□□ -1.54
RIPK4-201ENST00000332512 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
RIPK4-201ENST00000332512 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
RIPK4-201ENST00000332512 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
RIPK4-201ENST00000332512 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
RIPK4-201ENST00000332512 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
RIPK4-201ENST00000332512 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
RIPK4-201ENST00000332512 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
RIPK4-201ENST00000332512 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
RIPK4-201ENST00000332512 CRCT1Q9UGL9 99 aa5.27□□□□□ -1.57
RIPK4-201ENST00000332512 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
RIPK4-201ENST00000332512 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
RIPK4-201ENST00000332512 BIRC6Q9NR09 4857 aa5.23□□□□□ -1.57
RIPK4-201ENST00000332512 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
RIPK4-201ENST00000332512 INE1O15225 51 aa5.21□□□□□ -1.58
RIPK4-201ENST00000332512 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
RIPK4-201ENST00000332512 MT1XP80297 61 aa5.14□□□□□ -1.59
RIPK4-201ENST00000332512 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
RIPK4-201ENST00000332512 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
RIPK4-201ENST00000332512 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
RIPK4-201ENST00000332512 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
RIPK4-201ENST00000332512 MT1BP07438 61 aa5.11□□□□□ -1.59
RIPK4-201ENST00000332512 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
RIPK4-201ENST00000332512 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
RIPK4-201ENST00000332512 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
RIPK4-201ENST00000332512 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
RIPK4-201ENST00000332512 USH2AO75445 5202 aa5.04□□□□□ -1.6
RIPK4-201ENST00000332512 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
RIPK4-201ENST00000332512 KMT2DO14686 5537 aa4.96□□□□□ -1.61
RIPK4-201ENST00000332512 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
RIPK4-201ENST00000332512 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
RIPK4-201ENST00000332512 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
RIPK4-201ENST00000332512 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
RIPK4-201ENST00000332512 LCE2BO14633 110 aa4.82□□□□□ -1.64
RIPK4-201ENST00000332512 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
RIPK4-201ENST00000332512 MT1GP13640 62 aa4.65□□□□□ -1.67
RIPK4-201ENST00000332512 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
RIPK4-201ENST00000332512 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
RIPK4-201ENST00000332512 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
RIPK4-201ENST00000332512 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
RIPK4-201ENST00000332512 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms