RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
RIPK4-201ENST00000332512 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
RIPK4-201ENST00000332512 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
RIPK4-201ENST00000332512 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
RIPK4-201ENST00000332512 EHMT2Q96KQ7 1210 aa22.34■■□□□ 1.17
RIPK4-201ENST00000332512 PCGF6Q9BYE7 350 aa22.31■■□□□ 1.16
RIPK4-201ENST00000332512 FAM9AQ8IZU1 332 aaPredicted RBP21.87■■□□□ 1.09
RIPK4-201ENST00000332512 PPARGC1BQ86YN6 1023 aaKnown RBP21.75■■□□□ 1.07
RIPK4-201ENST00000332512 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
RIPK4-201ENST00000332512 HRCP23327 699 aa21.65■■□□□ 1.06
RIPK4-201ENST00000332512 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
RIPK4-201ENST00000332512 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
RIPK4-201ENST00000332512 TRIM41Q8WV44 630 aa21.3■■□□□ 1
RIPK4-201ENST00000332512 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
RIPK4-201ENST00000332512 CCER1Q8TC90 406 aaPredicted RBP21.04■□□□□ 0.96
RIPK4-201ENST00000332512 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
RIPK4-201ENST00000332512 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
RIPK4-201ENST00000332512 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
RIPK4-201ENST00000332512 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
RIPK4-201ENST00000332512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.79■□□□□ 0.92
RIPK4-201ENST00000332512 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
RIPK4-201ENST00000332512 CENPBP07199 599 aaPredicted RBP20.62■□□□□ 0.89
RIPK4-201ENST00000332512 APLP2Q06481 763 aa20.59■□□□□ 0.89
RIPK4-201ENST00000332512 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
RIPK4-201ENST00000332512 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
RIPK4-201ENST00000332512 HNRNPUL2Q1KMD3 747 aaKnown RBP20.44■□□□□ 0.86
RIPK4-201ENST00000332512 DIEXFQ68CQ4 756 aaKnown RBP20.38■□□□□ 0.85
RIPK4-201ENST00000332512 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
RIPK4-201ENST00000332512 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
RIPK4-201ENST00000332512 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
RIPK4-201ENST00000332512 ITGAEP38570 1179 aa20.19■□□□□ 0.82
RIPK4-201ENST00000332512 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
RIPK4-201ENST00000332512 NEUROD1Q13562 356 aa20.11■□□□□ 0.81
RIPK4-201ENST00000332512 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
RIPK4-201ENST00000332512 ABCC9O60706 1549 aa20.08■□□□□ 0.81
RIPK4-201ENST00000332512 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
RIPK4-201ENST00000332512 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
RIPK4-201ENST00000332512 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
RIPK4-201ENST00000332512 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
RIPK4-201ENST00000332512 BCANQ96GW7 911 aa19.79■□□□□ 0.76
RIPK4-201ENST00000332512 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.75
RIPK4-201ENST00000332512 MIER1Q8N108 512 aa19.7■□□□□ 0.74
RIPK4-201ENST00000332512 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
RIPK4-201ENST00000332512 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
RIPK4-201ENST00000332512 NEFLP07196 543 aa19.65■□□□□ 0.74
RIPK4-201ENST00000332512 MYT1Q01538 1121 aa19.57■□□□□ 0.72
RIPK4-201ENST00000332512 ERICH6Q7L0X2 663 aa19.54■□□□□ 0.72
RIPK4-201ENST00000332512 FAM50AQ14320 339 aaKnown RBP19.53■□□□□ 0.72
RIPK4-201ENST00000332512 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
RIPK4-201ENST00000332512 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
RIPK4-201ENST00000332512 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
RIPK4-201ENST00000332512 POLR3GLQ9BT43 218 aa19.43■□□□□ 0.7
RIPK4-201ENST00000332512 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
RIPK4-201ENST00000332512 HIRIP3Q9BW71 556 aaPredicted RBP19.4■□□□□ 0.7
RIPK4-201ENST00000332512 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
RIPK4-201ENST00000332512 SOGA1O94964 1423 aa19.32■□□□□ 0.68
RIPK4-201ENST00000332512 FKBP8Q14318 412 aa19.26■□□□□ 0.67
RIPK4-201ENST00000332512 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
RIPK4-201ENST00000332512 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
RIPK4-201ENST00000332512 CLIP1P30622 1438 aa19.2■□□□□ 0.66
RIPK4-201ENST00000332512 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
RIPK4-201ENST00000332512 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
RIPK4-201ENST00000332512 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
RIPK4-201ENST00000332512 ANP32CO43423 234 aa19.15■□□□□ 0.66
RIPK4-201ENST00000332512 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
RIPK4-201ENST00000332512 IRX6P78412 446 aaPredicted RBP19.11■□□□□ 0.65
RIPK4-201ENST00000332512 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
RIPK4-201ENST00000332512 GOLGA3Q08378 1498 aa19.03■□□□□ 0.64
RIPK4-201ENST00000332512 WIZO95785 1651 aa19.02■□□□□ 0.64
RIPK4-201ENST00000332512 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
RIPK4-201ENST00000332512 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.64
RIPK4-201ENST00000332512 SENP3-EIF4A1A0A087X0R7 540 aa19.02■□□□□ 0.64
RIPK4-201ENST00000332512 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
RIPK4-201ENST00000332512 SIN3AQ96ST3 1273 aa19.01■□□□□ 0.63
RIPK4-201ENST00000332512 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
RIPK4-201ENST00000332512 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
RIPK4-201ENST00000332512 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
RIPK4-201ENST00000332512 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
RIPK4-201ENST00000332512 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
RIPK4-201ENST00000332512 FAM9BQ8IZU0 186 aa18.89■□□□□ 0.61
RIPK4-201ENST00000332512 EEA1Q15075 1411 aa18.85■□□□□ 0.61
RIPK4-201ENST00000332512 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
RIPK4-201ENST00000332512 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
RIPK4-201ENST00000332512 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
RIPK4-201ENST00000332512 NACADO15069 1562 aa18.79■□□□□ 0.6
RIPK4-201ENST00000332512 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
RIPK4-201ENST00000332512 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
RIPK4-201ENST00000332512 RRP7BPQ9NSQ0 103 aa18.74■□□□□ 0.59
RIPK4-201ENST00000332512 TSHZ2Q9NRE2 1034 aa18.73■□□□□ 0.59
RIPK4-201ENST00000332512 ANP32EQ9BTT0 268 aa18.73■□□□□ 0.59
RIPK4-201ENST00000332512 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
RIPK4-201ENST00000332512 NBR1Q14596 966 aa18.68■□□□□ 0.58
RIPK4-201ENST00000332512 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
RIPK4-201ENST00000332512 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
RIPK4-201ENST00000332512 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
RIPK4-201ENST00000332512 CCNB3Q8WWL7 1395 aa18.66■□□□□ 0.58
RIPK4-201ENST00000332512 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
RIPK4-201ENST00000332512 MRS2Q9HD23 443 aa18.64■□□□□ 0.57
RIPK4-201ENST00000332512 FBLN2P98095 1184 aa18.62■□□□□ 0.57
RIPK4-201ENST00000332512 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms