RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 FBN3Q75N90 2809 aa4.34□□□□□ -1.71
KPNB1-201ENST00000290158 CSMD3Q7Z407 3707 aa4.34□□□□□ -1.72
KPNB1-201ENST00000290158 COL7A1Q02388 2944 aa4.32□□□□□ -1.72
KPNB1-201ENST00000290158 MEGF8Q7Z7M0 2845 aa4.3□□□□□ -1.72
KPNB1-201ENST00000290158 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
KPNB1-201ENST00000290158 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
KPNB1-201ENST00000290158 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
KPNB1-201ENST00000290158 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
KPNB1-201ENST00000290158 DNAH3Q8TD57 4116 aa4.21□□□□□ -1.74
KPNB1-201ENST00000290158 MT1HP80294 61 aa4.2□□□□□ -1.74
KPNB1-201ENST00000290158 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
KPNB1-201ENST00000290158 PLECQ15149 4684 aaKnown RBP4.17□□□□□ -1.74
KPNB1-201ENST00000290158 DNAH5Q8TE73 4624 aa4.17□□□□□ -1.74
KPNB1-201ENST00000290158 FAT2Q9NYQ8 4349 aa4.14□□□□□ -1.75
KPNB1-201ENST00000290158 DNAH10Q8IVF4 4471 aa4.14□□□□□ -1.75
KPNB1-201ENST00000290158 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
KPNB1-201ENST00000290158 VPS13DQ5THJ4 4388 aa4.1□□□□□ -1.75
KPNB1-201ENST00000290158 DNAH2Q9P225 4427 aa4.09□□□□□ -1.76
KPNB1-201ENST00000290158 DNAH17Q9UFH2 4485 aa4.08□□□□□ -1.76
KPNB1-201ENST00000290158 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
KPNB1-201ENST00000290158 ANK2Q01484 3957 aa4.08□□□□□ -1.76
KPNB1-201ENST00000290158 DNAH11Q96DT5 4516 aa4.07□□□□□ -1.76
KPNB1-201ENST00000290158 KMT2AQ03164 3969 aa4.05□□□□□ -1.76
KPNB1-201ENST00000290158 MT2AP02795 61 aa4.04□□□□□ -1.76
KPNB1-201ENST00000290158 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
KPNB1-201ENST00000290158 DYNC2H1Q8NCM8 4307 aaKnown RBP4.04□□□□□ -1.76
KPNB1-201ENST00000290158 LRP1BQ9NZR2 4599 aa4.03□□□□□ -1.76
KPNB1-201ENST00000290158 PRKDCP78527 4128 aaKnown RBP4.03□□□□□ -1.76
KPNB1-201ENST00000290158 DNAH7Q8WXX0 4024 aa4.01□□□□□ -1.77
KPNB1-201ENST00000290158 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
KPNB1-201ENST00000290158 DYNC1H1Q14204 4646 aaKnown RBP3.99□□□□□ -1.77
KPNB1-201ENST00000290158 MT1FP04733 61 aa3.98□□□□□ -1.77
KPNB1-201ENST00000290158 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
KPNB1-201ENST00000290158 DNAH8Q96JB1 4490 aa3.97□□□□□ -1.77
KPNB1-201ENST00000290158 FRAS1Q86XX4 4008 aa3.96□□□□□ -1.78
KPNB1-201ENST00000290158 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.78
KPNB1-201ENST00000290158 SACSQ9NZJ4 4579 aa3.91□□□□□ -1.78
KPNB1-201ENST00000290158 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
KPNB1-201ENST00000290158 SPRR2EP22531 72 aa3.89□□□□□ -1.79
KPNB1-201ENST00000290158 SPRR2BP35325 72 aa3.89□□□□□ -1.79
KPNB1-201ENST00000290158 SPRR2AP35326 72 aa3.89□□□□□ -1.79
KPNB1-201ENST00000290158 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
KPNB1-201ENST00000290158 KRTAP17-1Q9BYP8 105 aa3.88□□□□□ -1.79
KPNB1-201ENST00000290158 FAT1Q14517 4588 aa3.87□□□□□ -1.79
KPNB1-201ENST00000290158 SPRR2GQ9BYE4 73 aa3.86□□□□□ -1.79
KPNB1-201ENST00000290158 LYSTQ99698 3801 aa3.85□□□□□ -1.79
KPNB1-201ENST00000290158 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
KPNB1-201ENST00000290158 LCE2DQ5TA82 110 aaPredicted RBP3.81□□□□□ -1.8
KPNB1-201ENST00000290158 RYR1P21817 5038 aa3.8□□□□□ -1.8
KPNB1-201ENST00000290158 SPRR2DP22532 72 aa3.76□□□□□ -1.81
KPNB1-201ENST00000290158 APOBP04114 4563 aaKnown RBP3.73□□□□□ -1.81
KPNB1-201ENST00000290158 HECTD4Q9Y4D8 3996 aa3.73□□□□□ -1.81
KPNB1-201ENST00000290158 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
KPNB1-201ENST00000290158 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
KPNB1-201ENST00000290158 FAT3Q8TDW7 4589 aa3.73□□□□□ -1.81
KPNB1-201ENST00000290158 RYR3Q15413 4870 aa3.72□□□□□ -1.81
KPNB1-201ENST00000290158 HSPG2P98160 4391 aa3.71□□□□□ -1.81
KPNB1-201ENST00000290158 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
KPNB1-201ENST00000290158 PKHD1L1Q86WI1 4243 aa3.68□□□□□ -1.82
KPNB1-201ENST00000290158 LCE2BO14633 110 aa3.65□□□□□ -1.83
KPNB1-201ENST00000290158 KRTAP19-1Q8IUB9 90 aa3.64□□□□□ -1.83
KPNB1-201ENST00000290158 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
KPNB1-201ENST00000290158 MT1GP13640 62 aa3.61□□□□□ -1.83
KPNB1-201ENST00000290158 LPAP08519 4548 aa3.61□□□□□ -1.83
KPNB1-201ENST00000290158 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
KPNB1-201ENST00000290158 LRP1Q07954 4544 aaKnown RBP3.56□□□□□ -1.84
KPNB1-201ENST00000290158 MT1XP80297 61 aa3.56□□□□□ -1.84
KPNB1-201ENST00000290158 KRTAP19-8Q3LI54 63 aa3.55□□□□□ -1.84
KPNB1-201ENST00000290158 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
KPNB1-201ENST00000290158 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
KPNB1-201ENST00000290158 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
KPNB1-201ENST00000290158 MT1BP07438 61 aa3.52□□□□□ -1.85
KPNB1-201ENST00000290158 PKHD1P08F94 4074 aa3.51□□□□□ -1.85
KPNB1-201ENST00000290158 RYR2Q92736 4967 aa3.5□□□□□ -1.85
KPNB1-201ENST00000290158 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
KPNB1-201ENST00000290158 TNXBP22105 4242 aa3.49□□□□□ -1.85
KPNB1-201ENST00000290158 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
KPNB1-201ENST00000290158 PKD1P98161 4303 aa3.48□□□□□ -1.85
KPNB1-201ENST00000290158 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
KPNB1-201ENST00000290158 HERC1Q15751 4861 aa3.45□□□□□ -1.86
KPNB1-201ENST00000290158 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
KPNB1-201ENST00000290158 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
KPNB1-201ENST00000290158 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
KPNB1-201ENST00000290158 MUC17Q685J3 4493 aa3.39□□□□□ -1.87
KPNB1-201ENST00000290158 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
KPNB1-201ENST00000290158 MT4P47944 62 aa3.38□□□□□ -1.87
KPNB1-201ENST00000290158 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
KPNB1-201ENST00000290158 KIAA1109Q2LD37 5005 aa3.35□□□□□ -1.87
KPNB1-201ENST00000290158 HERC2O95714 4834 aa3.35□□□□□ -1.87
KPNB1-201ENST00000290158 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
KPNB1-201ENST00000290158 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
KPNB1-201ENST00000290158 MT3P25713 68 aa3.28□□□□□ -1.88
KPNB1-201ENST00000290158 LRP2P98164 4655 aa3.27□□□□□ -1.89
KPNB1-201ENST00000290158 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
KPNB1-201ENST00000290158 PRM1P04553 51 aa3.23□□□□□ -1.89
KPNB1-201ENST00000290158 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
KPNB1-201ENST00000290158 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
KPNB1-201ENST00000290158 MT1LQ93083 61 aa3.21□□□□□ -1.9
KPNB1-201ENST00000290158 MT1EP04732 61 aa3.2□□□□□ -1.9
KPNB1-201ENST00000290158 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms