RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.47□□□□□ -0.734e-10■■■■■ 57.2
KPNB1-201ENST00000290158 QKIQ96PU8 341 aaKnown RBP eCLIP10.5□□□□□ -0.739e-14■■■■■ 56.2
KPNB1-201ENST00000290158 SF3B1O75533 1304 aaKnown RBP eCLIP10.25□□□□□ -0.773e-7■■■■■ 45.3
KPNB1-201ENST00000290158 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.46□□□□□ -1.213e-8■■■■■ 35.6
KPNB1-201ENST00000290158 SUB1P53999 127 aaKnown RBP eCLIP9.07□□□□□ -0.961e-7■■■■■ 35.4
KPNB1-201ENST00000290158 SF3B4Q15427 424 aaKnown RBP eCLIP9.67□□□□□ -0.868e-7■■■■■ 32.7
KPNB1-201ENST00000290158 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.75□□□□□ -0.698e-7■■■■■ 32.1
KPNB1-201ENST00000290158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.531e-6■■■■■ 31.3
KPNB1-201ENST00000290158 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.398e-8■■■■■ 27.2
KPNB1-201ENST00000290158 METAP2P50579 478 aaKnown RBP eCLIP11.46□□□□□ -0.582e-6■■■■■ 26.9
KPNB1-201ENST00000290158 TARDBPQ13148 414 aaKnown RBP eCLIP9.84□□□□□ -0.835e-16■■■■■ 26.8
KPNB1-201ENST00000290158 RBM22Q9NW64 420 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■■■□ 24.4
KPNB1-201ENST00000290158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.483e-6■■■■□ 23.4
KPNB1-201ENST00000290158 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.1□□□□□ -0.792e-6■■■■□ 23
KPNB1-201ENST00000290158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.81□□□□□ -0.842e-8■■■■□ 22.4
KPNB1-201ENST00000290158 PCBP2Q15366 365 aaKnown RBP eCLIP9.89□□□□□ -0.831e-7■■■■□ 22.3
KPNB1-201ENST00000290158 TIA1P31483 386 aaKnown RBP eCLIP9.51□□□□□ -0.891e-9■■■■□ 21.6
KPNB1-201ENST00000290158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.39□□□□□ -0.593e-6■■■■□ 21.3
KPNB1-201ENST00000290158 CSTF2P33240 577 aaKnown RBP eCLIP9.9□□□□□ -0.822e-8■■■■□ 20
KPNB1-201ENST00000290158 EFTUD2Q15029 972 aaKnown RBP eCLIP10.69□□□□□ -0.75e-8■■■■□ 19.6
KPNB1-201ENST00000290158 YBX3P16989 372 aaKnown RBP eCLIP10.14□□□□□ -0.792e-7■■■□□ 19.1
KPNB1-201ENST00000290158 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.316e-17■■■□□ 18.9
KPNB1-201ENST00000290158 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.62□□□□□ -0.872e-7■■■□□ 18.3
KPNB1-201ENST00000290158 SRSF7Q16629 238 aaKnown RBP eCLIP8.34□□□□□ -1.074e-12■■■□□ 17.7
KPNB1-201ENST00000290158 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■□□ 17.5
KPNB1-201ENST00000290158 KHSRPQ92945 711 aaKnown RBP eCLIP9.34□□□□□ -0.916e-9■■■□□ 17.2
KPNB1-201ENST00000290158 HNRNPKP61978 463 aaKnown RBP eCLIP9.61□□□□□ -0.875e-7■■■□□ 17.1
KPNB1-201ENST00000290158 ILF3Q12906 894 aaKnown RBP eCLIP9.91□□□□□ -0.828e-8■■■□□ 17
KPNB1-201ENST00000290158 PCBP1Q15365 356 aaKnown RBP eCLIP10.03□□□□□ -0.83e-8■■■□□ 16.8
KPNB1-201ENST00000290158 FXR1P51114 621 aaKnown RBP eCLIP10.55□□□□□ -0.727e-7■■■□□ 16.4
KPNB1-201ENST00000290158 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.641e-9■■■□□ 15.6
KPNB1-201ENST00000290158 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.44□□□□□ -0.742e-15■■■□□ 15.1
KPNB1-201ENST00000290158 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.59□□□□□ -0.557e-8■■■□□ 14.6
KPNB1-201ENST00000290158 U2AF2P26368 475 aaKnown RBP eCLIP11.57□□□□□ -0.569e-7■■□□□ 14.5
KPNB1-201ENST00000290158 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■■□□□ 14.4
KPNB1-201ENST00000290158 FMR1Q06787 632 aaKnown RBP eCLIP10.53□□□□□ -0.724e-7■■□□□ 14.3
KPNB1-201ENST00000290158 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.763e-7■■□□□ 14.3
KPNB1-201ENST00000290158 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.01□□□□□ -0.819e-8■■□□□ 14.2
KPNB1-201ENST00000290158 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■□□□ 14.1
KPNB1-201ENST00000290158 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.782e-10■■□□□ 13.7
KPNB1-201ENST00000290158 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.03□□□□□ -0.645e-8■■□□□ 13.6
KPNB1-201ENST00000290158 HNRNPCP07910 306 aaKnown RBP eCLIP11.02□□□□□ -0.652e-7■■□□□ 13.4
KPNB1-201ENST00000290158 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.01□□□□□ -0.811e-7■■□□□ 13.2
KPNB1-201ENST00000290158 RPS3P23396 243 aaKnown RBP eCLIP9.98□□□□□ -0.815e-7■■□□□ 13.1
KPNB1-201ENST00000290158 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.5□□□□□ -0.572e-6■■□□□ 12.7
KPNB1-201ENST00000290158 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.73□□□□□ -0.699e-10■■□□□ 12.4
KPNB1-201ENST00000290158 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■□□□ 12.2
KPNB1-201ENST00000290158 DDX3XO00571 662 aaKnown RBP eCLIP10.29□□□□□ -0.764e-12■■□□□ 12
KPNB1-201ENST00000290158 ZC3H11AO75152 810 aaKnown RBP eCLIP10.53□□□□□ -0.724e-26■■□□□ 12
KPNB1-201ENST00000290158 SRSF1Q07955 248 aaKnown RBP eCLIP8.46□□□□□ -1.051e-6■■□□□ 11.8
KPNB1-201ENST00000290158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.198e-8■■□□□ 11.8
KPNB1-201ENST00000290158 RBFOX2O43251 390 aaKnown RBP eCLIP8.72□□□□□ -1.013e-6■■□□□ 11.7
KPNB1-201ENST00000290158 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.624e-6■■□□□ 11.5
KPNB1-201ENST00000290158 NOLC1Q14978 699 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■□□□ 11.5
KPNB1-201ENST00000290158 G3BP1Q13283 466 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■■□□□ 11.4
KPNB1-201ENST00000290158 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■□□□□ 11
KPNB1-201ENST00000290158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.615e-25■□□□□ 10.7
KPNB1-201ENST00000290158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.665e-7■□□□□ 10.7
KPNB1-201ENST00000290158 EIF3HO15372 352 aaKnown RBP eCLIP10.86□□□□□ -0.678e-6■□□□□ 10.6
KPNB1-201ENST00000290158 DKC1O60832 514 aaKnown RBP eCLIP11.08□□□□□ -0.644e-13■□□□□ 10.2
KPNB1-201ENST00000290158 DDX6P26196 483 aaKnown RBP eCLIP9.84□□□□□ -0.834e-11■□□□□ 10.2
KPNB1-201ENST00000290158 PPIGQ13427 754 aaKnown RBP eCLIP10.17□□□□□ -0.781e-7■□□□□ 10.1
KPNB1-201ENST00000290158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.61e-7■□□□□ 10.1
KPNB1-201ENST00000290158 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.37□□□□□ -0.595e-6■□□□□ 9.9
KPNB1-201ENST00000290158 SF3A3Q12874 501 aaKnown RBP eCLIP11.37□□□□□ -0.593e-7■□□□□ 9.8
KPNB1-201ENST00000290158 FUSP35637 526 aaKnown RBP eCLIP7.87□□□□□ -1.156e-7■□□□□ 9.7
KPNB1-201ENST00000290158 SND1Q7KZF4 910 aaKnown RBP eCLIP11.27□□□□□ -0.62e-6■□□□□ 9.4
KPNB1-201ENST00000290158 TIAL1Q01085 375 aaKnown RBP eCLIP9.06□□□□□ -0.966e-6■□□□□ 8.9
KPNB1-201ENST00000290158 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.89□□□□□ -0.676e-6■□□□□ 8.7
KPNB1-201ENST00000290158 CDC40O60508 579 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■□□□□ 8.5
KPNB1-201ENST00000290158 LSM11P83369 360 aaKnown RBP eCLIP8.89□□□□□ -0.992e-11■□□□□ 8.3
KPNB1-201ENST00000290158 HNRNPLP14866 589 aaKnown RBP eCLIP10.05□□□□□ -0.89e-6■□□□□ 8.2
KPNB1-201ENST00000290158 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.423e-6■□□□□ 8.2
KPNB1-201ENST00000290158 SMNDC1O75940 238 aaKnown RBP eCLIP10.49□□□□□ -0.733e-7■□□□□ 8.1
KPNB1-201ENST00000290158 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.5□□□□□ -0.733e-10■□□□□ 8
Retrieved 75 of 75 RNA–protein pairs in 14.6 ms