RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
KPNB1-201ENST00000290158 NISCHQ9Y2I1 1504 aa16.63■□□□□ 0.25
KPNB1-201ENST00000290158 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
KPNB1-201ENST00000290158 SHROOM4Q9ULL8 1493 aa16.52■□□□□ 0.24
KPNB1-201ENST00000290158 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
KPNB1-201ENST00000290158 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
KPNB1-201ENST00000290158 MYT1Q01538 1121 aa16.3■□□□□ 0.2
KPNB1-201ENST00000290158 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.13
KPNB1-201ENST00000290158 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.11
KPNB1-201ENST00000290158 CENPBP07199 599 aaPredicted RBP15.75■□□□□ 0.11
KPNB1-201ENST00000290158 ERICH6Q7L0X2 663 aa15.75■□□□□ 0.11
KPNB1-201ENST00000290158 FAM9AQ8IZU1 332 aaPredicted RBP15.74■□□□□ 0.11
KPNB1-201ENST00000290158 APLP2Q06481 763 aa15.74■□□□□ 0.11
KPNB1-201ENST00000290158 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
KPNB1-201ENST00000290158 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
KPNB1-201ENST00000290158 PCGF6Q9BYE7 350 aa15.56■□□□□ 0.08
KPNB1-201ENST00000290158 ZEB1P37275 1124 aaPredicted RBP15.51■□□□□ 0.07
KPNB1-201ENST00000290158 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
KPNB1-201ENST00000290158 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
KPNB1-201ENST00000290158 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
KPNB1-201ENST00000290158 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
KPNB1-201ENST00000290158 NEFLP07196 543 aa15.2■□□□□ 0.02
KPNB1-201ENST00000290158 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
KPNB1-201ENST00000290158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.09■□□□□ 0.01
KPNB1-201ENST00000290158 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
KPNB1-201ENST00000290158 HRCP23327 699 aa15.09■□□□□ 0.01
KPNB1-201ENST00000290158 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
KPNB1-201ENST00000290158 ABCC9O60706 1549 aa15.02□□□□□ -0.01
KPNB1-201ENST00000290158 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■□□□□ 11
KPNB1-201ENST00000290158 ITGAEP38570 1179 aa14.85□□□□□ -0.03
KPNB1-201ENST00000290158 CNGB1Q14028 1251 aaPredicted RBP14.84□□□□□ -0.03
KPNB1-201ENST00000290158 TRIM26Q12899 539 aaPredicted RBP14.79□□□□□ -0.04
KPNB1-201ENST00000290158 POLR3GLQ9BT43 218 aa14.79□□□□□ -0.04
KPNB1-201ENST00000290158 DAXXQ9UER7 740 aaPredicted RBP14.79□□□□□ -0.04
KPNB1-201ENST00000290158 RTL5Q5HYW3 569 aaPredicted RBP14.74□□□□□ -0.05
KPNB1-201ENST00000290158 FBLN2P98095 1184 aa14.69□□□□□ -0.06
KPNB1-201ENST00000290158 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
KPNB1-201ENST00000290158 GTF3C3Q9Y5Q9 886 aa14.58□□□□□ -0.08
KPNB1-201ENST00000290158 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
KPNB1-201ENST00000290158 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
KPNB1-201ENST00000290158 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.09
KPNB1-201ENST00000290158 BCANQ96GW7 911 aa14.45□□□□□ -0.1
KPNB1-201ENST00000290158 FAM50AQ14320 339 aaKnown RBP14.44□□□□□ -0.1
KPNB1-201ENST00000290158 ARID3CA6NKF2 412 aa14.43□□□□□ -0.1
KPNB1-201ENST00000290158 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
KPNB1-201ENST00000290158 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
KPNB1-201ENST00000290158 ACIN1Q9UKV3 1341 aaKnown RBP14.37□□□□□ -0.11
KPNB1-201ENST00000290158 CLSPNQ9HAW4 1339 aa14.36□□□□□ -0.11
KPNB1-201ENST00000290158 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
KPNB1-201ENST00000290158 P3H3Q8IVL6 736 aa14.29□□□□□ -0.12
KPNB1-201ENST00000290158 GLIPR1L2Q4G1C9 344 aa14.29□□□□□ -0.12
KPNB1-201ENST00000290158 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
KPNB1-201ENST00000290158 EIF5BO60841 1220 aaKnown RBP14.28□□□□□ -0.12
KPNB1-201ENST00000290158 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
KPNB1-201ENST00000290158 ZNF326Q5BKZ1 582 aaKnown RBP14.25□□□□□ -0.13
KPNB1-201ENST00000290158 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
KPNB1-201ENST00000290158 NEUROD1Q13562 356 aa14.21□□□□□ -0.14
KPNB1-201ENST00000290158 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
KPNB1-201ENST00000290158 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
KPNB1-201ENST00000290158 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
KPNB1-201ENST00000290158 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
KPNB1-201ENST00000290158 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
KPNB1-201ENST00000290158 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.16
KPNB1-201ENST00000290158 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
KPNB1-201ENST00000290158 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
KPNB1-201ENST00000290158 ANP32CO43423 234 aa13.98□□□□□ -0.17
KPNB1-201ENST00000290158 CANXP27824 592 aaKnown RBP13.93□□□□□ -0.18
KPNB1-201ENST00000290158 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
KPNB1-201ENST00000290158 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
KPNB1-201ENST00000290158 FKBP8Q14318 412 aa13.89□□□□□ -0.19
KPNB1-201ENST00000290158 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
KPNB1-201ENST00000290158 CHMP7Q8WUX9 453 aaPredicted RBP13.88□□□□□ -0.19
KPNB1-201ENST00000290158 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
KPNB1-201ENST00000290158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.198e-8■■□□□ 11.8
KPNB1-201ENST00000290158 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
KPNB1-201ENST00000290158 NBR1Q14596 966 aa13.86□□□□□ -0.19
KPNB1-201ENST00000290158 ARXQ96QS3 562 aa13.83□□□□□ -0.2
KPNB1-201ENST00000290158 NEFMP07197 916 aa13.83□□□□□ -0.2
KPNB1-201ENST00000290158 RB1CC1Q8TDY2 1594 aa13.81□□□□□ -0.2
KPNB1-201ENST00000290158 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
KPNB1-201ENST00000290158 A0A0G2JS52 829 aa13.81□□□□□ -0.2
KPNB1-201ENST00000290158 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
KPNB1-201ENST00000290158 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
KPNB1-201ENST00000290158 CHIC2Q9UKJ5 165 aa13.76□□□□□ -0.21
KPNB1-201ENST00000290158 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
KPNB1-201ENST00000290158 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
KPNB1-201ENST00000290158 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
KPNB1-201ENST00000290158 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
KPNB1-201ENST00000290158 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.22
KPNB1-201ENST00000290158 C14orf37Q86TY3 774 aa13.67□□□□□ -0.22
KPNB1-201ENST00000290158 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
KPNB1-201ENST00000290158 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
KPNB1-201ENST00000290158 TNNT2P45379 298 aaPredicted RBP13.63□□□□□ -0.23
KPNB1-201ENST00000290158 IRX6P78412 446 aaPredicted RBP13.63□□□□□ -0.23
KPNB1-201ENST00000290158 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
KPNB1-201ENST00000290158 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
KPNB1-201ENST00000290158 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
KPNB1-201ENST00000290158 UPF2Q9HAU5 1272 aaKnown RBP13.61□□□□□ -0.23
KPNB1-201ENST00000290158 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
KPNB1-201ENST00000290158 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms