RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
HMCN1-201ENST00000271588 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
HMCN1-201ENST00000271588 ZFHX3Q15911 3703 aa2.09□□□□□ -2.08
HMCN1-201ENST00000271588 MYCBP2O75592 4640 aa2.08□□□□□ -2.08
HMCN1-201ENST00000271588 TRRAPQ9Y4A5 3859 aa2.08□□□□□ -2.08
HMCN1-201ENST00000271588 DNAH8Q96JB1 4490 aa2.06□□□□□ -2.08
HMCN1-201ENST00000271588 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
HMCN1-201ENST00000271588 LRP2P98164 4655 aa2.05□□□□□ -2.08
HMCN1-201ENST00000271588 LOC400499M0QZD8 3231 aa2.04□□□□□ -2.08
HMCN1-201ENST00000271588 ANK2Q01484 3957 aa2.04□□□□□ -2.08
HMCN1-201ENST00000271588 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
HMCN1-201ENST00000271588 SPTBN5Q9NRC6 3674 aaKnown RBP2.03□□□□□ -2.08
HMCN1-201ENST00000271588 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
HMCN1-201ENST00000271588 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.08
HMCN1-201ENST00000271588 PKD1P98161 4303 aa2.02□□□□□ -2.09
HMCN1-201ENST00000271588 WDFY3Q8IZQ1 3526 aa2.02□□□□□ -2.09
HMCN1-201ENST00000271588 LRP1Q07954 4544 aaKnown RBP2.02□□□□□ -2.09
HMCN1-201ENST00000271588 DNHD1Q96M86 4753 aa2.01□□□□□ -2.09
HMCN1-201ENST00000271588 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
HMCN1-201ENST00000271588 FAT1Q14517 4588 aa2□□□□□ -2.09
HMCN1-201ENST00000271588 HECTD4Q9Y4D8 3996 aa1.99□□□□□ -2.09
HMCN1-201ENST00000271588 KMT2AQ03164 3969 aa1.99□□□□□ -2.09
HMCN1-201ENST00000271588 RELNP78509 3460 aa1.98□□□□□ -2.09
HMCN1-201ENST00000271588 ZFHX4Q86UP3 3567 aa1.97□□□□□ -2.09
HMCN1-201ENST00000271588 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
HMCN1-201ENST00000271588 FLGP20930 4061 aaPredicted RBP1.96□□□□□ -2.1
HMCN1-201ENST00000271588 BIRC6Q9NR09 4857 aa1.96□□□□□ -2.1
HMCN1-201ENST00000271588 CSMD1Q96PZ7 3565 aa1.96□□□□□ -2.1
HMCN1-201ENST00000271588 CUBNO60494 3623 aa1.95□□□□□ -2.1
HMCN1-201ENST00000271588 PKHD1L1Q86WI1 4243 aa1.94□□□□□ -2.1
HMCN1-201ENST00000271588 LRP1BQ9NZR2 4599 aa1.94□□□□□ -2.1
HMCN1-201ENST00000271588 LORP23490 312 aaPredicted RBP1.93□□□□□ -2.1
HMCN1-201ENST00000271588 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
HMCN1-201ENST00000271588 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
HMCN1-201ENST00000271588 HSPG2P98160 4391 aa1.9□□□□□ -2.1
HMCN1-201ENST00000271588 FAT2Q9NYQ8 4349 aa1.9□□□□□ -2.1
HMCN1-201ENST00000271588 TNXBP22105 4242 aa1.9□□□□□ -2.11
HMCN1-201ENST00000271588 KRTAP19-8Q3LI54 63 aa1.89□□□□□ -2.11
HMCN1-201ENST00000271588 KRTAP10-5P60370 271 aa1.88□□□□□ -2.11
HMCN1-201ENST00000271588 HYDINQ4G0P3 5121 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 LAMA5O15230 3695 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 MT3P25713 68 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 SVEP1Q4LDE5 3571 aa1.85□□□□□ -2.11
HMCN1-201ENST00000271588 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.11
HMCN1-201ENST00000271588 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.11
HMCN1-201ENST00000271588 SPENQ96T58 3664 aaKnown RBP1.84□□□□□ -2.12
HMCN1-201ENST00000271588 MT2AP02795 61 aa1.84□□□□□ -2.12
HMCN1-201ENST00000271588 STARD9Q9P2P6 4700 aa1.83□□□□□ -2.12
HMCN1-201ENST00000271588 MT1HP80294 61 aa1.83□□□□□ -2.12
HMCN1-201ENST00000271588 PCLOQ9Y6V0 5065 aa1.82□□□□□ -2.12
HMCN1-201ENST00000271588 SMG1Q96Q15 3661 aaKnown RBP1.81□□□□□ -2.12
HMCN1-201ENST00000271588 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
HMCN1-201ENST00000271588 CSMD2Q7Z408 3487 aa1.8□□□□□ -2.12
HMCN1-201ENST00000271588 RYR1P21817 5038 aa1.8□□□□□ -2.12
HMCN1-201ENST00000271588 HMCN2Q8NDA2 5059 aa1.79□□□□□ -2.12
HMCN1-201ENST00000271588 HERC1Q15751 4861 aa1.79□□□□□ -2.12
HMCN1-201ENST00000271588 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
HMCN1-201ENST00000271588 LYSTQ99698 3801 aa1.78□□□□□ -2.13
HMCN1-201ENST00000271588 VPS13CQ709C8 3753 aa1.77□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP4-5Q9BYR2 181 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 RYR2Q92736 4967 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 MT1GP13640 62 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 MT1FP04733 61 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 KMT2DO14686 5537 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP4-1Q9BYQ7 146 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 RYR3Q15413 4870 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 HERC2O95714 4834 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP19-1Q8IUB9 90 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 LPAP08519 4548 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 DMDP11532 3685 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 EPPK1P58107 5090 aaKnown RBP1.72□□□□□ -2.13
HMCN1-201ENST00000271588 MUC3AQ02505 3323 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 MT1LQ93083 61 aa1.71□□□□□ -2.13
HMCN1-201ENST00000271588 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
HMCN1-201ENST00000271588 UBR4Q5T4S7 5183 aa1.71□□□□□ -2.14
HMCN1-201ENST00000271588 MT1XP80297 61 aa1.69□□□□□ -2.14
HMCN1-201ENST00000271588 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
HMCN1-201ENST00000271588 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
HMCN1-201ENST00000271588 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
HMCN1-201ENST00000271588 MT1EP04732 61 aa1.66□□□□□ -2.14
HMCN1-201ENST00000271588 MT1BP07438 61 aa1.64□□□□□ -2.15
HMCN1-201ENST00000271588 KMT2CQ8NEZ4 4911 aaKnown RBP1.62□□□□□ -2.15
HMCN1-201ENST00000271588 SPRR2AP35326 72 aa1.61□□□□□ -2.15
HMCN1-201ENST00000271588 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
HMCN1-201ENST00000271588 KRTAP9-8Q9BYQ0 159 aa1.61□□□□□ -2.15
HMCN1-201ENST00000271588 LCE2BO14633 110 aa1.6□□□□□ -2.15
HMCN1-201ENST00000271588 KRTAP9-3Q9BYQ3 159 aa1.59□□□□□ -2.15
HMCN1-201ENST00000271588 SPRR2BP35325 72 aa1.59□□□□□ -2.16
HMCN1-201ENST00000271588 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
HMCN1-201ENST00000271588 SPRR2EP22531 72 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 KRTAP2-3P0C7H8 128 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 KRTAP2-4Q9BYR9 128 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 KRTAP2-1Q9BYU5 128 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
HMCN1-201ENST00000271588 MT1AP04731 61 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms