RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 PELP1Q8IZL8 1130 aaKnown RBP8.17□□□□□ -1.1
HMCN1-201ENST00000271588 MYT1Q01538 1121 aa8.15□□□□□ -1.11
HMCN1-201ENST00000271588 NISCHQ9Y2I1 1504 aa7.96□□□□□ -1.14
HMCN1-201ENST00000271588 ZEB1P37275 1124 aaPredicted RBP7.79□□□□□ -1.16
HMCN1-201ENST00000271588 CCER1Q8TC90 406 aaPredicted RBP7.74□□□□□ -1.17
HMCN1-201ENST00000271588 CENPBP07199 599 aaPredicted RBP7.66□□□□□ -1.18
HMCN1-201ENST00000271588 DCAF8L2P0C7V8 631 aa7.62□□□□□ -1.19
HMCN1-201ENST00000271588 YTHDC1Q96MU7 727 aaKnown RBP7.55□□□□□ -1.2
HMCN1-201ENST00000271588 FAM9AQ8IZU1 332 aaPredicted RBP7.53□□□□□ -1.2
HMCN1-201ENST00000271588 APLP2Q06481 763 aa7.52□□□□□ -1.21
HMCN1-201ENST00000271588 TTBK1Q5TCY1 1321 aaPredicted RBP7.51□□□□□ -1.21
HMCN1-201ENST00000271588 SUPT5HO00267 1087 aaKnown RBP7.47□□□□□ -1.21
HMCN1-201ENST00000271588 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
HMCN1-201ENST00000271588 NEFLP07196 543 aa7.38□□□□□ -1.23
HMCN1-201ENST00000271588 CLSPNQ9HAW4 1339 aa7.33□□□□□ -1.24
HMCN1-201ENST00000271588 MYT1LQ9UL68 1186 aa7.23□□□□□ -1.25
HMCN1-201ENST00000271588 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
HMCN1-201ENST00000271588 SHROOM4Q9ULL8 1493 aa7.2□□□□□ -1.26
HMCN1-201ENST00000271588 PCGF6Q9BYE7 350 aa7.17□□□□□ -1.26
HMCN1-201ENST00000271588 HRCP23327 699 aa7.16□□□□□ -1.26
HMCN1-201ENST00000271588 TRIM41Q8WV44 630 aa7.15□□□□□ -1.26
HMCN1-201ENST00000271588 DAXXQ9UER7 740 aaPredicted RBP7.14□□□□□ -1.27
HMCN1-201ENST00000271588 RTL5Q5HYW3 569 aaPredicted RBP7.08□□□□□ -1.28
HMCN1-201ENST00000271588 ACIN1Q9UKV3 1341 aaKnown RBP7.05□□□□□ -1.28
HMCN1-201ENST00000271588 SLC24A1O60721 1099 aa7.04□□□□□ -1.28
HMCN1-201ENST00000271588 UBTFP17480 764 aaKnown RBP7□□□□□ -1.29
HMCN1-201ENST00000271588 GLIPR1L2Q4G1C9 344 aa6.97□□□□□ -1.29
HMCN1-201ENST00000271588 ZNF316A6NFI3 1004 aaPredicted RBP6.93□□□□□ -1.3
HMCN1-201ENST00000271588 DCAF1Q9Y4B6 1507 aa6.92□□□□□ -1.3
HMCN1-201ENST00000271588 RANGAP1P46060 587 aaPredicted RBP6.92□□□□□ -1.3
HMCN1-201ENST00000271588 DIEXFQ68CQ4 756 aaKnown RBP6.89□□□□□ -1.31
HMCN1-201ENST00000271588 EIF5BO60841 1220 aaKnown RBP6.87□□□□□ -1.31
HMCN1-201ENST00000271588 CDK11AQ9UQ88 783 aaPredicted RBP6.87□□□□□ -1.31
HMCN1-201ENST00000271588 CHIC1Q5VXU3 224 aa6.86□□□□□ -1.31
HMCN1-201ENST00000271588 ANP32EQ9BTT0 268 aa6.86□□□□□ -1.31
HMCN1-201ENST00000271588 NEFMP07197 916 aa6.86□□□□□ -1.31
HMCN1-201ENST00000271588 BCL11AQ9H165 835 aa6.83□□□□□ -1.32
HMCN1-201ENST00000271588 EHMT2Q96KQ7 1210 aa6.82□□□□□ -1.32
HMCN1-201ENST00000271588 ANP32BQ92688 251 aaKnown RBP6.82□□□□□ -1.32
HMCN1-201ENST00000271588 ANP32AP39687 249 aaKnown RBP6.82□□□□□ -1.32
HMCN1-201ENST00000271588 CCDC180Q9P1Z9 1646 aa6.81□□□□□ -1.32
HMCN1-201ENST00000271588 ANP32CO43423 234 aa6.8□□□□□ -1.32
HMCN1-201ENST00000271588 EEA1Q15075 1411 aa6.79□□□□□ -1.32
HMCN1-201ENST00000271588 ATP1B4Q9UN42 357 aaPredicted RBP6.77□□□□□ -1.32
HMCN1-201ENST00000271588 ARID4BQ4LE39 1312 aaPredicted RBP6.76□□□□□ -1.33
HMCN1-201ENST00000271588 ZBTB47Q9UFB7 747 aaPredicted RBP6.76□□□□□ -1.33
HMCN1-201ENST00000271588 UPF2Q9HAU5 1272 aaKnown RBP6.74□□□□□ -1.33
HMCN1-201ENST00000271588 PPARGC1BQ86YN6 1023 aaKnown RBP6.73□□□□□ -1.33
HMCN1-201ENST00000271588 NEUROD1Q13562 356 aa6.71□□□□□ -1.34
HMCN1-201ENST00000271588 PRKCSHP14314 528 aaPredicted RBP6.71□□□□□ -1.34
HMCN1-201ENST00000271588 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
HMCN1-201ENST00000271588 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.69□□□□□ -1.34
HMCN1-201ENST00000271588 NCLP19338 710 aaKnown RBP6.68□□□□□ -1.34
HMCN1-201ENST00000271588 DDRGK1Q96HY6 314 aa6.67□□□□□ -1.34
HMCN1-201ENST00000271588 ERICH6BQ5W0A0 696 aa6.67□□□□□ -1.34
HMCN1-201ENST00000271588 TNNT2P45379 298 aaPredicted RBP6.66□□□□□ -1.34
HMCN1-201ENST00000271588 TRIM44Q96DX7 344 aaPredicted RBP6.66□□□□□ -1.34
HMCN1-201ENST00000271588 ZCCHC6Q5VYS8 1495 aaKnown RBP6.65□□□□□ -1.35
HMCN1-201ENST00000271588 TIMELESSQ9UNS1 1208 aa6.64□□□□□ -1.35
HMCN1-201ENST00000271588 HNRNPUL2Q1KMD3 747 aaKnown RBP6.63□□□□□ -1.35
HMCN1-201ENST00000271588 CFAP44Q96MT7 982 aa6.63□□□□□ -1.35
HMCN1-201ENST00000271588 PPM1GO15355 546 aaPredicted RBP6.62□□□□□ -1.35
HMCN1-201ENST00000271588 BECN1Q14457 450 aa6.61□□□□□ -1.35
HMCN1-201ENST00000271588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.61□□□□□ -1.35
HMCN1-201ENST00000271588 CHMP4BQ9H444 224 aaKnown RBP6.6□□□□□ -1.35
HMCN1-201ENST00000271588 TONSLQ96HA7 1378 aa6.6□□□□□ -1.35
HMCN1-201ENST00000271588 PTMSP20962 102 aa6.6□□□□□ -1.35
HMCN1-201ENST00000271588 CSRNP3Q8WYN3 585 aa6.59□□□□□ -1.35
HMCN1-201ENST00000271588 SCAF1Q9H7N4 1312 aaKnown RBP6.59□□□□□ -1.35
HMCN1-201ENST00000271588 GOLGA6L22H0YM25 854 aa6.58□□□□□ -1.36
HMCN1-201ENST00000271588 CANXP27824 592 aaKnown RBP6.58□□□□□ -1.36
HMCN1-201ENST00000271588 FAM50AQ14320 339 aaKnown RBP6.57□□□□□ -1.36
HMCN1-201ENST00000271588 LOC105371045A0A1W2PR82 267 aa6.57□□□□□ -1.36
HMCN1-201ENST00000271588 ITGAEP38570 1179 aa6.56□□□□□ -1.36
HMCN1-201ENST00000271588 TRIM52Q96A61 297 aa6.55□□□□□ -1.36
HMCN1-201ENST00000271588 RSF1Q96T23 1441 aaPredicted RBP6.55□□□□□ -1.36
HMCN1-201ENST00000271588 HSP90AA1P07900 732 aaKnown RBP6.55□□□□□ -1.36
HMCN1-201ENST00000271588 POLR3GLQ9BT43 218 aa6.54□□□□□ -1.36
HMCN1-201ENST00000271588 CDCA8Q53HL2 280 aa6.53□□□□□ -1.36
HMCN1-201ENST00000271588 MS4A1P11836 297 aa6.53□□□□□ -1.36
HMCN1-201ENST00000271588 GOLGA3Q08378 1498 aa6.52□□□□□ -1.37
HMCN1-201ENST00000271588 NRDCO43847 1150 aa6.51□□□□□ -1.37
HMCN1-201ENST00000271588 USP35Q9P2H5 1018 aa6.5□□□□□ -1.37
HMCN1-201ENST00000271588 L1TD1Q5T7N2 865 aaKnown RBP6.5□□□□□ -1.37
HMCN1-201ENST00000271588 CCDC136Q96JN2 1154 aa6.5□□□□□ -1.37
HMCN1-201ENST00000271588 PODXL2Q9NZ53 605 aa6.5□□□□□ -1.37
HMCN1-201ENST00000271588 HAP1P54257 671 aaPredicted RBP6.49□□□□□ -1.37
HMCN1-201ENST00000271588 CEP164Q9UPV0 1460 aa6.49□□□□□ -1.37
HMCN1-201ENST00000271588 MYH16Q9H6N6 1097 aa6.49□□□□□ -1.37
HMCN1-201ENST00000271588 NACADO15069 1562 aa6.47□□□□□ -1.37
HMCN1-201ENST00000271588 GOLGA6L6A8MZA4 724 aa6.47□□□□□ -1.37
HMCN1-201ENST00000271588 CCER2I3L3R5 266 aa6.47□□□□□ -1.37
HMCN1-201ENST00000271588 FHAD1B1AJZ9 1412 aa6.46□□□□□ -1.37
HMCN1-201ENST00000271588 TNIKQ9UKE5 1360 aa6.46□□□□□ -1.37
HMCN1-201ENST00000271588 SLC4A1APQ9BWU0 796 aaKnown RBP6.46□□□□□ -1.38
HMCN1-201ENST00000271588 CHMP4AQ9BY43 222 aa6.45□□□□□ -1.38
HMCN1-201ENST00000271588 MYO15BQ96JP2 1530 aa6.45□□□□□ -1.38
HMCN1-201ENST00000271588 BCANQ96GW7 911 aa6.45□□□□□ -1.38
HMCN1-201ENST00000271588 FKBP8Q14318 412 aa6.45□□□□□ -1.38
HMCN1-201ENST00000271588 CLIP1P30622 1438 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms