RNA–Protein interactions for RNA: ENST00000261842.9

AP4E1-201, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP4E1, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-201ENST00000261842 DNAH10Q8IVF4 4471 aa6.65□□□□□ -1.35
AP4E1-201ENST00000261842 DNAH1Q9P2D7 4330 aa6.64□□□□□ -1.35
AP4E1-201ENST00000261842 VPS13DQ5THJ4 4388 aa6.64□□□□□ -1.35
AP4E1-201ENST00000261842 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
AP4E1-201ENST00000261842 COL7A1Q02388 2944 aa6.61□□□□□ -1.35
AP4E1-201ENST00000261842 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
AP4E1-201ENST00000261842 DNAH8Q96JB1 4490 aa6.5□□□□□ -1.37
AP4E1-201ENST00000261842 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
AP4E1-201ENST00000261842 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
AP4E1-201ENST00000261842 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
AP4E1-201ENST00000261842 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
AP4E1-201ENST00000261842 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
AP4E1-201ENST00000261842 STARD9Q9P2P6 4700 aa6.36□□□□□ -1.39
AP4E1-201ENST00000261842 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
AP4E1-201ENST00000261842 DNAH3Q8TD57 4116 aa6.32□□□□□ -1.4
AP4E1-201ENST00000261842 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
AP4E1-201ENST00000261842 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
AP4E1-201ENST00000261842 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
AP4E1-201ENST00000261842 DYNC2H1Q8NCM8 4307 aaKnown RBP6.25□□□□□ -1.41
AP4E1-201ENST00000261842 CSMD3Q7Z407 3707 aa6.24□□□□□ -1.41
AP4E1-201ENST00000261842 FAT1Q14517 4588 aa6.22□□□□□ -1.41
AP4E1-201ENST00000261842 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
AP4E1-201ENST00000261842 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.43
AP4E1-201ENST00000261842 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
AP4E1-201ENST00000261842 RYR1P21817 5038 aa6.11□□□□□ -1.43
AP4E1-201ENST00000261842 RYR2Q92736 4967 aa6.08□□□□□ -1.44
AP4E1-201ENST00000261842 FAT2Q9NYQ8 4349 aa6.03□□□□□ -1.44
AP4E1-201ENST00000261842 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
AP4E1-201ENST00000261842 ANK2Q01484 3957 aa6.01□□□□□ -1.45
AP4E1-201ENST00000261842 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
AP4E1-201ENST00000261842 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
AP4E1-201ENST00000261842 DNAH6Q9C0G6 4158 aa5.97□□□□□ -1.45
AP4E1-201ENST00000261842 RYR3Q15413 4870 aa5.95□□□□□ -1.46
AP4E1-201ENST00000261842 MT2AP02795 61 aa5.93□□□□□ -1.46
AP4E1-201ENST00000261842 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
AP4E1-201ENST00000261842 MT1HP80294 61 aa5.9□□□□□ -1.47
AP4E1-201ENST00000261842 PRKDCP78527 4128 aaKnown RBP5.86□□□□□ -1.47
AP4E1-201ENST00000261842 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
AP4E1-201ENST00000261842 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
AP4E1-201ENST00000261842 HERC1Q15751 4861 aa5.83□□□□□ -1.48
AP4E1-201ENST00000261842 HECTD4Q9Y4D8 3996 aa5.82□□□□□ -1.48
AP4E1-201ENST00000261842 MT1FP04733 61 aa5.81□□□□□ -1.48
AP4E1-201ENST00000261842 CMYA5Q8N3K9 4069 aa5.79□□□□□ -1.48
AP4E1-201ENST00000261842 KRTAP17-1Q9BYP8 105 aa5.78□□□□□ -1.48
AP4E1-201ENST00000261842 HSPG2P98160 4391 aa5.77□□□□□ -1.49
AP4E1-201ENST00000261842 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
AP4E1-201ENST00000261842 KMT2AQ03164 3969 aa5.77□□□□□ -1.49
AP4E1-201ENST00000261842 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
AP4E1-201ENST00000261842 DNAH7Q8WXX0 4024 aa5.76□□□□□ -1.49
AP4E1-201ENST00000261842 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
AP4E1-201ENST00000261842 HYDINQ4G0P3 5121 aa5.7□□□□□ -1.5
AP4E1-201ENST00000261842 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
AP4E1-201ENST00000261842 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
AP4E1-201ENST00000261842 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
AP4E1-201ENST00000261842 FRAS1Q86XX4 4008 aa5.6□□□□□ -1.51
AP4E1-201ENST00000261842 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
AP4E1-201ENST00000261842 LYSTQ99698 3801 aa5.56□□□□□ -1.52
AP4E1-201ENST00000261842 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
AP4E1-201ENST00000261842 MT1XP80297 61 aa5.55□□□□□ -1.52
AP4E1-201ENST00000261842 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
AP4E1-201ENST00000261842 MT1BP07438 61 aa5.51□□□□□ -1.53
AP4E1-201ENST00000261842 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
AP4E1-201ENST00000261842 HERC2O95714 4834 aa5.5□□□□□ -1.53
AP4E1-201ENST00000261842 LRP2P98164 4655 aa5.49□□□□□ -1.53
AP4E1-201ENST00000261842 PKHD1L1Q86WI1 4243 aa5.49□□□□□ -1.53
AP4E1-201ENST00000261842 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
AP4E1-201ENST00000261842 PKD1P98161 4303 aa5.46□□□□□ -1.54
AP4E1-201ENST00000261842 BIRC6Q9NR09 4857 aa5.45□□□□□ -1.54
AP4E1-201ENST00000261842 KMT2CQ8NEZ4 4911 aaKnown RBP5.44□□□□□ -1.54
AP4E1-201ENST00000261842 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
AP4E1-201ENST00000261842 MUC17Q685J3 4493 aa5.4□□□□□ -1.54
AP4E1-201ENST00000261842 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
AP4E1-201ENST00000261842 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
AP4E1-201ENST00000261842 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
AP4E1-201ENST00000261842 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
AP4E1-201ENST00000261842 TNXBP22105 4242 aa5.23□□□□□ -1.57
AP4E1-201ENST00000261842 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
AP4E1-201ENST00000261842 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
AP4E1-201ENST00000261842 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
AP4E1-201ENST00000261842 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
AP4E1-201ENST00000261842 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
AP4E1-201ENST00000261842 LPAP08519 4548 aa5.05□□□□□ -1.6
AP4E1-201ENST00000261842 EPPK1P58107 5090 aaKnown RBP5.05□□□□□ -1.6
AP4E1-201ENST00000261842 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
AP4E1-201ENST00000261842 MT1GP13640 62 aa5.02□□□□□ -1.61
AP4E1-201ENST00000261842 MT1LQ93083 61 aa4.99□□□□□ -1.61
AP4E1-201ENST00000261842 LCE2BO14633 110 aa4.95□□□□□ -1.62
AP4E1-201ENST00000261842 MT1EP04732 61 aa4.94□□□□□ -1.62
AP4E1-201ENST00000261842 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
AP4E1-201ENST00000261842 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
AP4E1-201ENST00000261842 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
AP4E1-201ENST00000261842 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
AP4E1-201ENST00000261842 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.64
AP4E1-201ENST00000261842 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.64
AP4E1-201ENST00000261842 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.64
AP4E1-201ENST00000261842 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
AP4E1-201ENST00000261842 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
AP4E1-201ENST00000261842 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
AP4E1-201ENST00000261842 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
AP4E1-201ENST00000261842 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms