RNA–Protein interactions for RNA: ENST00000261842.9

AP4E1-201, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP4E1, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-201ENST00000261842 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
AP4E1-201ENST00000261842 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
AP4E1-201ENST00000261842 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
AP4E1-201ENST00000261842 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
AP4E1-201ENST00000261842 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
AP4E1-201ENST00000261842 MYT1Q01538 1121 aa23.83■■□□□ 1.41
AP4E1-201ENST00000261842 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
AP4E1-201ENST00000261842 ZEB1P37275 1124 aaPredicted RBP23.62■■□□□ 1.37
AP4E1-201ENST00000261842 HRCP23327 699 aa23.46■■□□□ 1.35
AP4E1-201ENST00000261842 CENPBP07199 599 aaPredicted RBP23.16■■□□□ 1.3
AP4E1-201ENST00000261842 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
AP4E1-201ENST00000261842 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
AP4E1-201ENST00000261842 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
AP4E1-201ENST00000261842 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
AP4E1-201ENST00000261842 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
AP4E1-201ENST00000261842 APLP2Q06481 763 aa22.97■■□□□ 1.27
AP4E1-201ENST00000261842 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.26
AP4E1-201ENST00000261842 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
AP4E1-201ENST00000261842 PPARGC1BQ86YN6 1023 aaKnown RBP22.6■■□□□ 1.21
AP4E1-201ENST00000261842 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
AP4E1-201ENST00000261842 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
AP4E1-201ENST00000261842 YTHDC1Q96MU7 727 aaKnown RBP22.25■■□□□ 1.15
AP4E1-201ENST00000261842 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
AP4E1-201ENST00000261842 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
AP4E1-201ENST00000261842 DIEXFQ68CQ4 756 aaKnown RBP22.12■■□□□ 1.13
AP4E1-201ENST00000261842 NEFLP07196 543 aa22.11■■□□□ 1.13
AP4E1-201ENST00000261842 ERICH6Q7L0X2 663 aa22.1■■□□□ 1.13
AP4E1-201ENST00000261842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
AP4E1-201ENST00000261842 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
AP4E1-201ENST00000261842 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
AP4E1-201ENST00000261842 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
AP4E1-201ENST00000261842 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
AP4E1-201ENST00000261842 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
AP4E1-201ENST00000261842 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
AP4E1-201ENST00000261842 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
AP4E1-201ENST00000261842 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
AP4E1-201ENST00000261842 CLSPNQ9HAW4 1339 aa21.58■■□□□ 1.04
AP4E1-201ENST00000261842 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
AP4E1-201ENST00000261842 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
AP4E1-201ENST00000261842 ITGAEP38570 1179 aa21.47■■□□□ 1.03
AP4E1-201ENST00000261842 NEUROD1Q13562 356 aa21.39■■□□□ 1.02
AP4E1-201ENST00000261842 ABCC9O60706 1549 aa21.26■□□□□ 0.99
AP4E1-201ENST00000261842 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
AP4E1-201ENST00000261842 ANP32CO43423 234 aa21.18■□□□□ 0.98
AP4E1-201ENST00000261842 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
AP4E1-201ENST00000261842 EEA1Q15075 1411 aa21.15■□□□□ 0.98
AP4E1-201ENST00000261842 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
AP4E1-201ENST00000261842 BCANQ96GW7 911 aa21.09■□□□□ 0.97
AP4E1-201ENST00000261842 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
AP4E1-201ENST00000261842 RTL5Q5HYW3 569 aaPredicted RBP21.06■□□□□ 0.96
AP4E1-201ENST00000261842 DAXXQ9UER7 740 aaPredicted RBP21.03■□□□□ 0.96
AP4E1-201ENST00000261842 MIER1Q8N108 512 aa20.99■□□□□ 0.95
AP4E1-201ENST00000261842 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
AP4E1-201ENST00000261842 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
AP4E1-201ENST00000261842 RB1CC1Q8TDY2 1594 aa20.96■□□□□ 0.95
AP4E1-201ENST00000261842 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
AP4E1-201ENST00000261842 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
AP4E1-201ENST00000261842 CLIP1P30622 1438 aa20.91■□□□□ 0.94
AP4E1-201ENST00000261842 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
AP4E1-201ENST00000261842 MYT1LQ9UL68 1186 aa20.86■□□□□ 0.93
AP4E1-201ENST00000261842 FKBP8Q14318 412 aa20.85■□□□□ 0.93
AP4E1-201ENST00000261842 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
AP4E1-201ENST00000261842 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
AP4E1-201ENST00000261842 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
AP4E1-201ENST00000261842 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
AP4E1-201ENST00000261842 NACADO15069 1562 aa20.7■□□□□ 0.9
AP4E1-201ENST00000261842 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
AP4E1-201ENST00000261842 ANP32AP39687 249 aaKnown RBP20.65■□□□□ 0.9
AP4E1-201ENST00000261842 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
AP4E1-201ENST00000261842 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
AP4E1-201ENST00000261842 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
AP4E1-201ENST00000261842 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
AP4E1-201ENST00000261842 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
AP4E1-201ENST00000261842 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
AP4E1-201ENST00000261842 P3H3Q8IVL6 736 aa20.53■□□□□ 0.88
AP4E1-201ENST00000261842 SUPT16HQ9Y5B9 1047 aaKnown RBP20.52■□□□□ 0.88
AP4E1-201ENST00000261842 TIMELESSQ9UNS1 1208 aa20.47■□□□□ 0.87
AP4E1-201ENST00000261842 VPS8Q8N3P4 1428 aa20.46■□□□□ 0.87
AP4E1-201ENST00000261842 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
AP4E1-201ENST00000261842 SOGA1O94964 1423 aa20.44■□□□□ 0.86
AP4E1-201ENST00000261842 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
AP4E1-201ENST00000261842 GLIPR1L2Q4G1C9 344 aa20.37■□□□□ 0.85
AP4E1-201ENST00000261842 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
AP4E1-201ENST00000261842 FAM9BQ8IZU0 186 aa20.35■□□□□ 0.85
AP4E1-201ENST00000261842 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
AP4E1-201ENST00000261842 EIF5BO60841 1220 aaKnown RBP20.34■□□□□ 0.85
AP4E1-201ENST00000261842 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
AP4E1-201ENST00000261842 CCER2I3L3R5 266 aa20.33■□□□□ 0.85
AP4E1-201ENST00000261842 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.84
AP4E1-201ENST00000261842 MTUS2Q5JR59 1369 aa20.32■□□□□ 0.84
AP4E1-201ENST00000261842 CCDC136Q96JN2 1154 aa20.32■□□□□ 0.84
AP4E1-201ENST00000261842 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
AP4E1-201ENST00000261842 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
AP4E1-201ENST00000261842 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.83
AP4E1-201ENST00000261842 NPM2Q86SE8 214 aaKnown RBP20.23■□□□□ 0.83
AP4E1-201ENST00000261842 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
AP4E1-201ENST00000261842 TMC1Q8TDI8 760 aa20.19■□□□□ 0.82
AP4E1-201ENST00000261842 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
AP4E1-201ENST00000261842 HIRIP3Q9BW71 556 aaPredicted RBP20.19■□□□□ 0.82
AP4E1-201ENST00000261842 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms