RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 KRTAP12-2P59991 146 aa8.81□□□□□ -1
NDFIP1-201ENST00000253814 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
NDFIP1-201ENST00000253814 FAT1Q14517 4588 aa8.8□□□□□ -1
NDFIP1-201ENST00000253814 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
NDFIP1-201ENST00000253814 HECTD4Q9Y4D8 3996 aa8.76□□□□□ -1.01
NDFIP1-201ENST00000253814 VPS13BQ7Z7G8 4022 aa8.68□□□□□ -1.02
NDFIP1-201ENST00000253814 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
NDFIP1-201ENST00000253814 ALMS1Q8TCU4 4167 aa8.66□□□□□ -1.02
NDFIP1-201ENST00000253814 KRTAP12-1P59990 96 aa8.66□□□□□ -1.02
NDFIP1-201ENST00000253814 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
NDFIP1-201ENST00000253814 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
NDFIP1-201ENST00000253814 MYCBP2O75592 4640 aa8.59□□□□□ -1.03
NDFIP1-201ENST00000253814 M0R2T5 61 aa8.57□□□□□ -1.04
NDFIP1-201ENST00000253814 DYNC2H1Q8NCM8 4307 aaKnown RBP8.56□□□□□ -1.04
NDFIP1-201ENST00000253814 KRTAP21-3Q3LHN1 58 aa8.55□□□□□ -1.04
NDFIP1-201ENST00000253814 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
NDFIP1-201ENST00000253814 PLAC4Q8WY50 150 aa8.52□□□□□ -1.05
NDFIP1-201ENST00000253814 A0A0A0MQY5 61 aa8.46□□□□□ -1.06
NDFIP1-201ENST00000253814 HYDINQ4G0P3 5121 aa8.43□□□□□ -1.06
NDFIP1-201ENST00000253814 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
NDFIP1-201ENST00000253814 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
NDFIP1-201ENST00000253814 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
NDFIP1-201ENST00000253814 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
NDFIP1-201ENST00000253814 TNP1P09430 55 aa8.3□□□□□ -1.08
NDFIP1-201ENST00000253814 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
NDFIP1-201ENST00000253814 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
NDFIP1-201ENST00000253814 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
NDFIP1-201ENST00000253814 PP632Q6XCG6 107 aa8.21□□□□□ -1.1
NDFIP1-201ENST00000253814 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.1
NDFIP1-201ENST00000253814 KIAA1109Q2LD37 5005 aa8.13□□□□□ -1.11
NDFIP1-201ENST00000253814 RYR1P21817 5038 aa8.13□□□□□ -1.11
NDFIP1-201ENST00000253814 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
NDFIP1-201ENST00000253814 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
NDFIP1-201ENST00000253814 PKD1P98161 4303 aa8.08□□□□□ -1.12
NDFIP1-201ENST00000253814 LRP2P98164 4655 aa8□□□□□ -1.13
NDFIP1-201ENST00000253814 RYR3Q15413 4870 aa7.94□□□□□ -1.14
NDFIP1-201ENST00000253814 HSPG2P98160 4391 aa7.91□□□□□ -1.14
NDFIP1-201ENST00000253814 KRTAP17-1Q9BYP8 105 aa7.9□□□□□ -1.15
NDFIP1-201ENST00000253814 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
NDFIP1-201ENST00000253814 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
NDFIP1-201ENST00000253814 KRTAP4-1Q9BYQ7 146 aa7.81□□□□□ -1.16
NDFIP1-201ENST00000253814 RYR2Q92736 4967 aa7.77□□□□□ -1.16
NDFIP1-201ENST00000253814 LPAP08519 4548 aa7.69□□□□□ -1.18
NDFIP1-201ENST00000253814 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
NDFIP1-201ENST00000253814 TNXBP22105 4242 aa7.54□□□□□ -1.2
NDFIP1-201ENST00000253814 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
NDFIP1-201ENST00000253814 HERC2O95714 4834 aa7.37□□□□□ -1.23
NDFIP1-201ENST00000253814 EPPK1P58107 5090 aaKnown RBP7.34□□□□□ -1.23
NDFIP1-201ENST00000253814 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
NDFIP1-201ENST00000253814 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
NDFIP1-201ENST00000253814 MUC2Q02817 5179 aa7.25□□□□□ -1.25
NDFIP1-201ENST00000253814 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
NDFIP1-201ENST00000253814 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
NDFIP1-201ENST00000253814 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
NDFIP1-201ENST00000253814 SPRR2GQ9BYE4 73 aa7.09□□□□□ -1.27
NDFIP1-201ENST00000253814 MT1HP80294 61 aa7.04□□□□□ -1.28
NDFIP1-201ENST00000253814 KRTAP19-1Q8IUB9 90 aa7.04□□□□□ -1.28
NDFIP1-201ENST00000253814 MT2AP02795 61 aa7.03□□□□□ -1.28
NDFIP1-201ENST00000253814 MT1FP04733 61 aa7.03□□□□□ -1.28
NDFIP1-201ENST00000253814 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
NDFIP1-201ENST00000253814 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
NDFIP1-201ENST00000253814 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
NDFIP1-201ENST00000253814 INE1O15225 51 aa6.92□□□□□ -1.3
NDFIP1-201ENST00000253814 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.31
NDFIP1-201ENST00000253814 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
NDFIP1-201ENST00000253814 HERC1Q15751 4861 aa6.86□□□□□ -1.31
NDFIP1-201ENST00000253814 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
NDFIP1-201ENST00000253814 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
NDFIP1-201ENST00000253814 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
NDFIP1-201ENST00000253814 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
NDFIP1-201ENST00000253814 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
NDFIP1-201ENST00000253814 MT1XP80297 61 aa6.68□□□□□ -1.34
NDFIP1-201ENST00000253814 BIRC6Q9NR09 4857 aa6.67□□□□□ -1.34
NDFIP1-201ENST00000253814 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
NDFIP1-201ENST00000253814 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
NDFIP1-201ENST00000253814 MT1BP07438 61 aa6.65□□□□□ -1.35
NDFIP1-201ENST00000253814 HMCN2Q8NDA2 5059 aa6.64□□□□□ -1.35
NDFIP1-201ENST00000253814 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
NDFIP1-201ENST00000253814 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
NDFIP1-201ENST00000253814 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
NDFIP1-201ENST00000253814 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
NDFIP1-201ENST00000253814 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
NDFIP1-201ENST00000253814 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
NDFIP1-201ENST00000253814 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
NDFIP1-201ENST00000253814 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
NDFIP1-201ENST00000253814 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
NDFIP1-201ENST00000253814 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
NDFIP1-201ENST00000253814 LCE2BO14633 110 aa6.21□□□□□ -1.42
NDFIP1-201ENST00000253814 USH2AO75445 5202 aa6.2□□□□□ -1.42
NDFIP1-201ENST00000253814 KMT2DO14686 5537 aa6.18□□□□□ -1.42
NDFIP1-201ENST00000253814 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
NDFIP1-201ENST00000253814 OBSCNQ5VST9 7968 aa5.96□□□□□ -1.46
NDFIP1-201ENST00000253814 MT1GP13640 62 aa5.94□□□□□ -1.46
NDFIP1-201ENST00000253814 KRTAP9-6A8MVA2 160 aa5.9□□□□□ -1.47
NDFIP1-201ENST00000253814 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
NDFIP1-201ENST00000253814 MT1LQ93083 61 aa5.88□□□□□ -1.47
NDFIP1-201ENST00000253814 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
NDFIP1-201ENST00000253814 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.48
NDFIP1-201ENST00000253814 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
NDFIP1-201ENST00000253814 MT1EP04732 61 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms