RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 VPS13DQ5THJ4 4388 aa5.21□□□□□ -1.58
CCDC170-201ENST00000239374 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
CCDC170-201ENST00000239374 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
CCDC170-201ENST00000239374 DNAH5Q8TE73 4624 aa5.16□□□□□ -1.58
CCDC170-201ENST00000239374 LRP1BQ9NZR2 4599 aa5.16□□□□□ -1.58
CCDC170-201ENST00000239374 LYSTQ99698 3801 aa5.12□□□□□ -1.59
CCDC170-201ENST00000239374 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
CCDC170-201ENST00000239374 DNAH2Q9P225 4427 aa5.11□□□□□ -1.59
CCDC170-201ENST00000239374 DNAH3Q8TD57 4116 aa5.11□□□□□ -1.59
CCDC170-201ENST00000239374 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.59
CCDC170-201ENST00000239374 KMT2AQ03164 3969 aa5.09□□□□□ -1.59
CCDC170-201ENST00000239374 FAT1Q14517 4588 aa5.06□□□□□ -1.6
CCDC170-201ENST00000239374 PRKDCP78527 4128 aaKnown RBP5.03□□□□□ -1.6
CCDC170-201ENST00000239374 DNHD1Q96M86 4753 aa5.01□□□□□ -1.61
CCDC170-201ENST00000239374 KRTAP10-10P60014 251 aa5□□□□□ -1.61
CCDC170-201ENST00000239374 DNAH7Q8WXX0 4024 aa4.99□□□□□ -1.61
CCDC170-201ENST00000239374 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
CCDC170-201ENST00000239374 CMYA5Q8N3K9 4069 aa4.98□□□□□ -1.61
CCDC170-201ENST00000239374 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
CCDC170-201ENST00000239374 DYNC1H1Q14204 4646 aaKnown RBP4.97□□□□□ -1.61
CCDC170-201ENST00000239374 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
CCDC170-201ENST00000239374 DNAH6Q9C0G6 4158 aa4.94□□□□□ -1.62
CCDC170-201ENST00000239374 DYNC2H1Q8NCM8 4307 aaKnown RBP4.92□□□□□ -1.62
CCDC170-201ENST00000239374 SACSQ9NZJ4 4579 aa4.91□□□□□ -1.62
CCDC170-201ENST00000239374 MYCBP2O75592 4640 aa4.9□□□□□ -1.63
CCDC170-201ENST00000239374 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
CCDC170-201ENST00000239374 APOBP04114 4563 aaKnown RBP4.8□□□□□ -1.64
CCDC170-201ENST00000239374 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
CCDC170-201ENST00000239374 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
CCDC170-201ENST00000239374 LRP1Q07954 4544 aaKnown RBP4.75□□□□□ -1.65
CCDC170-201ENST00000239374 KRTAP4-1Q9BYQ7 146 aa4.73□□□□□ -1.65
CCDC170-201ENST00000239374 RYR1P21817 5038 aa4.72□□□□□ -1.65
CCDC170-201ENST00000239374 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
CCDC170-201ENST00000239374 HYDINQ4G0P3 5121 aa4.7□□□□□ -1.66
CCDC170-201ENST00000239374 FAT3Q8TDW7 4589 aa4.67□□□□□ -1.66
CCDC170-201ENST00000239374 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
CCDC170-201ENST00000239374 PKHD1P08F94 4074 aa4.65□□□□□ -1.66
CCDC170-201ENST00000239374 KIAA1109Q2LD37 5005 aa4.65□□□□□ -1.67
CCDC170-201ENST00000239374 INE1O15225 51 aa4.62□□□□□ -1.67
CCDC170-201ENST00000239374 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
CCDC170-201ENST00000239374 KRTAP10-12P60413 245 aa4.59□□□□□ -1.68
CCDC170-201ENST00000239374 LRP2P98164 4655 aa4.58□□□□□ -1.68
CCDC170-201ENST00000239374 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
CCDC170-201ENST00000239374 PKD1P98161 4303 aa4.54□□□□□ -1.68
CCDC170-201ENST00000239374 RYR3Q15413 4870 aa4.53□□□□□ -1.68
CCDC170-201ENST00000239374 HSPG2P98160 4391 aa4.46□□□□□ -1.69
CCDC170-201ENST00000239374 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
CCDC170-201ENST00000239374 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
CCDC170-201ENST00000239374 RYR2Q92736 4967 aa4.43□□□□□ -1.7
CCDC170-201ENST00000239374 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
CCDC170-201ENST00000239374 LPAP08519 4548 aa4.35□□□□□ -1.71
CCDC170-201ENST00000239374 MT2AP02795 61 aa4.34□□□□□ -1.71
CCDC170-201ENST00000239374 MT1HP80294 61 aa4.34□□□□□ -1.72
CCDC170-201ENST00000239374 MT1FP04733 61 aa4.32□□□□□ -1.72
CCDC170-201ENST00000239374 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
CCDC170-201ENST00000239374 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
CCDC170-201ENST00000239374 TNXBP22105 4242 aa4.31□□□□□ -1.72
CCDC170-201ENST00000239374 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
CCDC170-201ENST00000239374 HERC2O95714 4834 aa4.23□□□□□ -1.73
CCDC170-201ENST00000239374 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
CCDC170-201ENST00000239374 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
CCDC170-201ENST00000239374 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.74
CCDC170-201ENST00000239374 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
CCDC170-201ENST00000239374 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
CCDC170-201ENST00000239374 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
CCDC170-201ENST00000239374 MT1XP80297 61 aa4.12□□□□□ -1.75
CCDC170-201ENST00000239374 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
CCDC170-201ENST00000239374 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
CCDC170-201ENST00000239374 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
CCDC170-201ENST00000239374 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
CCDC170-201ENST00000239374 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
CCDC170-201ENST00000239374 MT1BP07438 61 aa4.08□□□□□ -1.76
CCDC170-201ENST00000239374 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
CCDC170-201ENST00000239374 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
CCDC170-201ENST00000239374 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
CCDC170-201ENST00000239374 HERC1Q15751 4861 aa3.98□□□□□ -1.77
CCDC170-201ENST00000239374 MUC2Q02817 5179 aa3.95□□□□□ -1.78
CCDC170-201ENST00000239374 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
CCDC170-201ENST00000239374 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
CCDC170-201ENST00000239374 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
CCDC170-201ENST00000239374 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.78
CCDC170-201ENST00000239374 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
CCDC170-201ENST00000239374 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
CCDC170-201ENST00000239374 LCE2DQ5TA82 110 aaPredicted RBP3.85□□□□□ -1.79
CCDC170-201ENST00000239374 UBR4Q5T4S7 5183 aa3.81□□□□□ -1.8
CCDC170-201ENST00000239374 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
CCDC170-201ENST00000239374 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
CCDC170-201ENST00000239374 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
CCDC170-201ENST00000239374 LCE2BO14633 110 aa3.74□□□□□ -1.81
CCDC170-201ENST00000239374 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
CCDC170-201ENST00000239374 MT1GP13640 62 aa3.71□□□□□ -1.82
CCDC170-201ENST00000239374 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
CCDC170-201ENST00000239374 MT1LQ93083 61 aa3.66□□□□□ -1.82
CCDC170-201ENST00000239374 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
CCDC170-201ENST00000239374 MT1EP04732 61 aa3.61□□□□□ -1.83
CCDC170-201ENST00000239374 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
CCDC170-201ENST00000239374 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
CCDC170-201ENST00000239374 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
CCDC170-201ENST00000239374 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
CCDC170-201ENST00000239374 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms