RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.72
CCDC170-201ENST00000239374 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
CCDC170-201ENST00000239374 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
CCDC170-201ENST00000239374 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
CCDC170-201ENST00000239374 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
CCDC170-201ENST00000239374 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
CCDC170-201ENST00000239374 HRCP23327 699 aa17.54■□□□□ 0.4
CCDC170-201ENST00000239374 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
CCDC170-201ENST00000239374 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
CCDC170-201ENST00000239374 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.36
CCDC170-201ENST00000239374 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
CCDC170-201ENST00000239374 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
CCDC170-201ENST00000239374 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
CCDC170-201ENST00000239374 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
CCDC170-201ENST00000239374 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
CCDC170-201ENST00000239374 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
CCDC170-201ENST00000239374 CCER1Q8TC90 406 aaPredicted RBP17■□□□□ 0.31
CCDC170-201ENST00000239374 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
CCDC170-201ENST00000239374 APLP2Q06481 763 aa16.75■□□□□ 0.27
CCDC170-201ENST00000239374 YTHDC1Q96MU7 727 aaKnown RBP16.73■□□□□ 0.27
CCDC170-201ENST00000239374 MYT1Q01538 1121 aa16.66■□□□□ 0.26
CCDC170-201ENST00000239374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
CCDC170-201ENST00000239374 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
CCDC170-201ENST00000239374 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
CCDC170-201ENST00000239374 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
CCDC170-201ENST00000239374 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
CCDC170-201ENST00000239374 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
CCDC170-201ENST00000239374 GTF3C3Q9Y5Q9 886 aa16.42■□□□□ 0.22
CCDC170-201ENST00000239374 ZCCHC6Q5VYS8 1495 aaKnown RBP16.37■□□□□ 0.21
CCDC170-201ENST00000239374 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
CCDC170-201ENST00000239374 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
CCDC170-201ENST00000239374 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
CCDC170-201ENST00000239374 NEFLP07196 543 aa16.17■□□□□ 0.18
CCDC170-201ENST00000239374 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
CCDC170-201ENST00000239374 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
CCDC170-201ENST00000239374 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
CCDC170-201ENST00000239374 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.16
CCDC170-201ENST00000239374 ITGAEP38570 1179 aa16.07■□□□□ 0.16
CCDC170-201ENST00000239374 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
CCDC170-201ENST00000239374 BCANQ96GW7 911 aa15.88■□□□□ 0.13
CCDC170-201ENST00000239374 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
CCDC170-201ENST00000239374 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
CCDC170-201ENST00000239374 MIER1Q8N108 512 aa15.8■□□□□ 0.12
CCDC170-201ENST00000239374 ABCC9O60706 1549 aa15.8■□□□□ 0.12
CCDC170-201ENST00000239374 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
CCDC170-201ENST00000239374 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
CCDC170-201ENST00000239374 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCDC170-201ENST00000239374 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
CCDC170-201ENST00000239374 CNGB1Q14028 1251 aaPredicted RBP15.6■□□□□ 0.09
CCDC170-201ENST00000239374 ANP32CO43423 234 aa15.59■□□□□ 0.09
CCDC170-201ENST00000239374 CEP162Q5TB80 1403 aa15.58■□□□□ 0.09
CCDC170-201ENST00000239374 FKBP8Q14318 412 aa15.58■□□□□ 0.08
CCDC170-201ENST00000239374 POLR3GLQ9BT43 218 aa15.56■□□□□ 0.08
CCDC170-201ENST00000239374 CDK11AQ9UQ88 783 aaPredicted RBP15.51■□□□□ 0.07
CCDC170-201ENST00000239374 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
CCDC170-201ENST00000239374 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
CCDC170-201ENST00000239374 CLIP1P30622 1438 aa15.44■□□□□ 0.06
CCDC170-201ENST00000239374 TNIKQ9UKE5 1360 aa15.44■□□□□ 0.06
CCDC170-201ENST00000239374 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
CCDC170-201ENST00000239374 RTL5Q5HYW3 569 aaPredicted RBP15.41■□□□□ 0.06
CCDC170-201ENST00000239374 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
CCDC170-201ENST00000239374 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
CCDC170-201ENST00000239374 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
CCDC170-201ENST00000239374 P3H3Q8IVL6 736 aa15.37■□□□□ 0.05
CCDC170-201ENST00000239374 EEA1Q15075 1411 aa15.37■□□□□ 0.05
CCDC170-201ENST00000239374 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
CCDC170-201ENST00000239374 DAXXQ9UER7 740 aaPredicted RBP15.33■□□□□ 0.05
CCDC170-201ENST00000239374 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.04
CCDC170-201ENST00000239374 HNRNPUQ00839 825 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC170-201ENST00000239374 SOGA1O94964 1423 aa15.32■□□□□ 0.04
CCDC170-201ENST00000239374 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
CCDC170-201ENST00000239374 IRX6P78412 446 aaPredicted RBP15.25■□□□□ 0.03
CCDC170-201ENST00000239374 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
CCDC170-201ENST00000239374 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
CCDC170-201ENST00000239374 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
CCDC170-201ENST00000239374 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
CCDC170-201ENST00000239374 ZNF326Q5BKZ1 582 aaKnown RBP15.21■□□□□ 0.02
CCDC170-201ENST00000239374 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
CCDC170-201ENST00000239374 FAM9BQ8IZU0 186 aa15.18■□□□□ 0.02
CCDC170-201ENST00000239374 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
CCDC170-201ENST00000239374 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
CCDC170-201ENST00000239374 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
CCDC170-201ENST00000239374 SIN3AQ96ST3 1273 aa15.13■□□□□ 0.01
CCDC170-201ENST00000239374 NACADO15069 1562 aa15.12■□□□□ 0.01
CCDC170-201ENST00000239374 NBR1Q14596 966 aa15.11■□□□□ 0.01
CCDC170-201ENST00000239374 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
CCDC170-201ENST00000239374 NPM2Q86SE8 214 aaKnown RBP15.1■□□□□ 0.01
CCDC170-201ENST00000239374 ARID3CA6NKF2 412 aa15.08■□□□□ 0.01
CCDC170-201ENST00000239374 BCL11AQ9H165 835 aa15.08■□□□□ 0
CCDC170-201ENST00000239374 WIZO95785 1651 aa15.07■□□□□ 0
CCDC170-201ENST00000239374 MRS2Q9HD23 443 aa15.06■□□□□ 0
CCDC170-201ENST00000239374 RBM19Q9Y4C8 960 aaKnown RBP15.06■□□□□ 0
CCDC170-201ENST00000239374 MYT1LQ9UL68 1186 aa15.06■□□□□ 0
CCDC170-201ENST00000239374 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ -0
CCDC170-201ENST00000239374 CHIC2Q9UKJ5 165 aa15.04■□□□□ -0
CCDC170-201ENST00000239374 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
CCDC170-201ENST00000239374 CCDC136Q96JN2 1154 aa15.03■□□□□ -0
CCDC170-201ENST00000239374 KCNH8Q96L42 1107 aa15□□□□□ -0.01
CCDC170-201ENST00000239374 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
CCDC170-201ENST00000239374 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms