RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 KRTAP1-5Q9BYS1 174 aa4.1□□□□□ -1.75
TCF4-278ENST00000636400 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
TCF4-278ENST00000636400 Q8NDZ9 215 aa4.1□□□□□ -1.75
TCF4-278ENST00000636400 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.75
TCF4-278ENST00000636400 VWFP04275 2813 aa4.09□□□□□ -1.75
TCF4-278ENST00000636400 Q6ZR54 194 aa4.09□□□□□ -1.75
TCF4-278ENST00000636400 Q5VSD8 79 aa4.09□□□□□ -1.75
TCF4-278ENST00000636400 OXTP01178 125 aa4.09□□□□□ -1.76
TCF4-278ENST00000636400 Q8N9P0 234 aaPredicted RBP4.09□□□□□ -1.76
TCF4-278ENST00000636400 SPINK7P58062 85 aa4.08□□□□□ -1.76
TCF4-278ENST00000636400 LAMA5O15230 3695 aa4.07□□□□□ -1.76
TCF4-278ENST00000636400 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
TCF4-278ENST00000636400 R4GN34 69 aa4.06□□□□□ -1.76
TCF4-278ENST00000636400 SPENQ96T58 3664 aaKnown RBP4.04□□□□□ -1.76
TCF4-278ENST00000636400 Q5XG85 94 aa4.04□□□□□ -1.76
TCF4-278ENST00000636400 ZFHX3Q15911 3703 aa4.03□□□□□ -1.76
TCF4-278ENST00000636400 KRTAP10-1P60331 282 aa4.03□□□□□ -1.76
TCF4-278ENST00000636400 ASPMQ8IZT6 3477 aa4.03□□□□□ -1.76
TCF4-278ENST00000636400 TENM2Q9NT68 2774 aa4.03□□□□□ -1.76
TCF4-278ENST00000636400 H3BS24 57 aa4.02□□□□□ -1.77
TCF4-278ENST00000636400 KRTAP10-2P60368 255 aa4.01□□□□□ -1.77
TCF4-278ENST00000636400 Q5VV11 94 aa4□□□□□ -1.77
TCF4-278ENST00000636400 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
TCF4-278ENST00000636400 DMDP11532 3685 aa3.99□□□□□ -1.77
TCF4-278ENST00000636400 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
TCF4-278ENST00000636400 Q6ZRN7 208 aaPredicted RBP3.97□□□□□ -1.77
TCF4-278ENST00000636400 PANO1I0J062 215 aa3.97□□□□□ -1.77
TCF4-278ENST00000636400 FBN1P35555 2871 aaKnown RBP3.96□□□□□ -1.78
TCF4-278ENST00000636400 ROMO1P60602 79 aa3.96□□□□□ -1.78
TCF4-278ENST00000636400 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
TCF4-278ENST00000636400 RELNP78509 3460 aa3.95□□□□□ -1.78
TCF4-278ENST00000636400 A0A087X002 238 aa3.95□□□□□ -1.78
TCF4-278ENST00000636400 COL7A1Q02388 2944 aa3.94□□□□□ -1.78
TCF4-278ENST00000636400 CYSTM1Q9H1C7 97 aa3.93□□□□□ -1.78
TCF4-278ENST00000636400 DCHS1Q96JQ0 3298 aa3.93□□□□□ -1.78
TCF4-278ENST00000636400 M0QZ58 72 aa3.92□□□□□ -1.78
TCF4-278ENST00000636400 ZFHX4Q86UP3 3567 aa3.92□□□□□ -1.78
TCF4-278ENST00000636400 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
TCF4-278ENST00000636400 KRTAP13-1Q8IUC0 172 aa3.91□□□□□ -1.78
TCF4-278ENST00000636400 SRRM2Q9UQ35 2752 aaKnown RBP3.9□□□□□ -1.78
TCF4-278ENST00000636400 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
TCF4-278ENST00000636400 ADM2Q7Z4H4 148 aa3.89□□□□□ -1.79
TCF4-278ENST00000636400 SPATA8Q6RVD6 105 aa3.87□□□□□ -1.79
TCF4-278ENST00000636400 NOTCH2NLQ7Z3S9 236 aa3.86□□□□□ -1.79
TCF4-278ENST00000636400 SMG1Q96Q15 3661 aaKnown RBP3.86□□□□□ -1.79
TCF4-278ENST00000636400 MUC3AQ02505 3323 aa3.83□□□□□ -1.8
TCF4-278ENST00000636400 A8MUU9 505 aa3.83□□□□□ -1.8
TCF4-278ENST00000636400 KRTAP11-1Q8IUC1 163 aa3.82□□□□□ -1.8
TCF4-278ENST00000636400 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
TCF4-278ENST00000636400 KRTAP7-1Q8IUC3 87 aa3.82□□□□□ -1.8
TCF4-278ENST00000636400 CSMD1Q96PZ7 3565 aa3.81□□□□□ -1.8
TCF4-278ENST00000636400 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
TCF4-278ENST00000636400 VPS13CQ709C8 3753 aa3.81□□□□□ -1.8
TCF4-278ENST00000636400 TRRAPQ9Y4A5 3859 aa3.8□□□□□ -1.8
TCF4-278ENST00000636400 BSNQ9UPA5 3926 aa3.79□□□□□ -1.8
TCF4-278ENST00000636400 OTOGQ6ZRI0 2925 aa3.79□□□□□ -1.8
TCF4-278ENST00000636400 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
TCF4-278ENST00000636400 MEGF8Q7Z7M0 2845 aa3.78□□□□□ -1.8
TCF4-278ENST00000636400 FBN3Q75N90 2809 aa3.76□□□□□ -1.81
TCF4-278ENST00000636400 SVEP1Q4LDE5 3571 aa3.73□□□□□ -1.81
TCF4-278ENST00000636400 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
TCF4-278ENST00000636400 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
TCF4-278ENST00000636400 A6NN06 94 aa3.72□□□□□ -1.81
TCF4-278ENST00000636400 PP632Q6XCG6 107 aa3.71□□□□□ -1.81
TCF4-278ENST00000636400 AKAP9Q99996 3911 aa3.71□□□□□ -1.82
TCF4-278ENST00000636400 TNP1P09430 55 aa3.7□□□□□ -1.82
TCF4-278ENST00000636400 KRTAP1-4P0C5Y4 121 aa3.68□□□□□ -1.82
TCF4-278ENST00000636400 XP32Q5T750 250 aa3.66□□□□□ -1.82
TCF4-278ENST00000636400 CUBNO60494 3623 aa3.66□□□□□ -1.82
TCF4-278ENST00000636400 A8MU10 97 aa3.63□□□□□ -1.83
TCF4-278ENST00000636400 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
TCF4-278ENST00000636400 KRTAP16-1A8MUX0 517 aa3.61□□□□□ -1.83
TCF4-278ENST00000636400 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
TCF4-278ENST00000636400 ZNF469Q96JG9 3925 aaPredicted RBP3.56□□□□□ -1.84
TCF4-278ENST00000636400 CSMD2Q7Z408 3487 aa3.55□□□□□ -1.84
TCF4-278ENST00000636400 H0YAA0 97 aa3.53□□□□□ -1.84
TCF4-278ENST00000636400 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
TCF4-278ENST00000636400 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
TCF4-278ENST00000636400 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
TCF4-278ENST00000636400 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
TCF4-278ENST00000636400 KRTAP10-10P60014 251 aa3.46□□□□□ -1.85
TCF4-278ENST00000636400 CSMD3Q7Z407 3707 aa3.45□□□□□ -1.86
TCF4-278ENST00000636400 P0C880 135 aa3.45□□□□□ -1.86
TCF4-278ENST00000636400 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
TCF4-278ENST00000636400 LYSTQ99698 3801 aa3.34□□□□□ -1.87
TCF4-278ENST00000636400 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
TCF4-278ENST00000636400 ALMS1Q8TCU4 4167 aa3.29□□□□□ -1.88
TCF4-278ENST00000636400 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
TCF4-278ENST00000636400 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
TCF4-278ENST00000636400 HECTD4Q9Y4D8 3996 aa3.26□□□□□ -1.89
TCF4-278ENST00000636400 DNAH7Q8WXX0 4024 aa3.25□□□□□ -1.89
TCF4-278ENST00000636400 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
TCF4-278ENST00000636400 ANK2Q01484 3957 aa3.22□□□□□ -1.89
TCF4-278ENST00000636400 CMYA5Q8N3K9 4069 aa3.22□□□□□ -1.89
TCF4-278ENST00000636400 KRTAP3-1Q9BYR8 98 aa3.21□□□□□ -1.9
TCF4-278ENST00000636400 DNAH1Q9P2D7 4330 aa3.19□□□□□ -1.9
TCF4-278ENST00000636400 KMT2AQ03164 3969 aa3.18□□□□□ -1.9
TCF4-278ENST00000636400 HUWE1Q7Z6Z7 4374 aaKnown RBP3.18□□□□□ -1.9
TCF4-278ENST00000636400 KRTAP10-6P60371 365 aaPredicted RBP3.16□□□□□ -1.9
TCF4-278ENST00000636400 VPS13BQ7Z7G8 4022 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms