RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 NBPF19A0A087WUL8 3843 aa4.24□□□□□ -1.73
CSMD2-210ENST00000619121 CFAP47Q6ZTR5 3102 aa4.23□□□□□ -1.73
CSMD2-210ENST00000619121 AKAP9Q99996 3911 aa4.23□□□□□ -1.73
CSMD2-210ENST00000619121 EYSQ5T1H1 3165 aa4.23□□□□□ -1.73
CSMD2-210ENST00000619121 VCANP13611 3396 aa4.23□□□□□ -1.73
CSMD2-210ENST00000619121 ATMQ13315 3056 aa4.22□□□□□ -1.73
CSMD2-210ENST00000619121 KRTAP26-1Q6PEX3 210 aa4.22□□□□□ -1.73
CSMD2-210ENST00000619121 KRTAP4-16G5E9R7 235 aaPredicted RBP4.21□□□□□ -1.74
CSMD2-210ENST00000619121 ZANQ9Y493 2812 aa4.2□□□□□ -1.74
CSMD2-210ENST00000619121 A8MUU9 505 aa4.2□□□□□ -1.74
CSMD2-210ENST00000619121 Q5VV11 94 aa4.19□□□□□ -1.74
CSMD2-210ENST00000619121 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
CSMD2-210ENST00000619121 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
CSMD2-210ENST00000619121 CDH23Q9H251 3354 aa4.19□□□□□ -1.74
CSMD2-210ENST00000619121 A0A0G2JQZ4 141 aa4.18□□□□□ -1.74
CSMD2-210ENST00000619121 DCHS2Q6V1P9 2916 aa4.16□□□□□ -1.74
CSMD2-210ENST00000619121 TENM4Q6N022 2769 aa4.16□□□□□ -1.74
CSMD2-210ENST00000619121 PKD1L1Q8TDX9 2849 aa4.15□□□□□ -1.74
CSMD2-210ENST00000619121 KRTAP10-1P60331 282 aa4.15□□□□□ -1.74
CSMD2-210ENST00000619121 TPRXLQ17RH7 258 aa4.15□□□□□ -1.74
CSMD2-210ENST00000619121 SRRM2Q9UQ35 2752 aaKnown RBP4.15□□□□□ -1.75
CSMD2-210ENST00000619121 Q6ZRN7 208 aaPredicted RBP4.15□□□□□ -1.75
CSMD2-210ENST00000619121 VWFP04275 2813 aa4.15□□□□□ -1.75
CSMD2-210ENST00000619121 PDZD2O15018 2839 aa4.13□□□□□ -1.75
CSMD2-210ENST00000619121 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
CSMD2-210ENST00000619121 C20orf166-AS1Q96NR2 134 aa4.13□□□□□ -1.75
CSMD2-210ENST00000619121 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
CSMD2-210ENST00000619121 TENM2Q9NT68 2774 aa4.09□□□□□ -1.76
CSMD2-210ENST00000619121 SPTBN5Q9NRC6 3674 aaKnown RBP4.08□□□□□ -1.76
CSMD2-210ENST00000619121 LOC400499M0QZD8 3231 aa4.08□□□□□ -1.76
CSMD2-210ENST00000619121 TGP01266 2768 aa4.08□□□□□ -1.76
CSMD2-210ENST00000619121 SZT2Q5T011 3432 aa4.08□□□□□ -1.76
CSMD2-210ENST00000619121 KRTAP10-2P60368 255 aa4.07□□□□□ -1.76
CSMD2-210ENST00000619121 FBN2P35556 2912 aa4.05□□□□□ -1.76
CSMD2-210ENST00000619121 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
CSMD2-210ENST00000619121 KRTAP13-1Q8IUC0 172 aa4.04□□□□□ -1.76
CSMD2-210ENST00000619121 KRTAP1-5Q9BYS1 174 aa4.04□□□□□ -1.76
CSMD2-210ENST00000619121 Q8NDZ9 215 aa4.04□□□□□ -1.76
CSMD2-210ENST00000619121 ZFHX3Q15911 3703 aa4.03□□□□□ -1.76
CSMD2-210ENST00000619121 CMYA5Q8N3K9 4069 aa4.02□□□□□ -1.77
CSMD2-210ENST00000619121 MXRA5Q9NR99 2828 aa3.99□□□□□ -1.77
CSMD2-210ENST00000619121 LAMA5O15230 3695 aa3.99□□□□□ -1.77
CSMD2-210ENST00000619121 TRRAPQ9Y4A5 3859 aa3.99□□□□□ -1.77
CSMD2-210ENST00000619121 BSNQ9UPA5 3926 aa3.96□□□□□ -1.77
CSMD2-210ENST00000619121 DNAH1Q9P2D7 4330 aa3.96□□□□□ -1.78
CSMD2-210ENST00000619121 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
CSMD2-210ENST00000619121 CYSTM1Q9H1C7 97 aa3.94□□□□□ -1.78
CSMD2-210ENST00000619121 DCHS1Q96JQ0 3298 aa3.92□□□□□ -1.78
CSMD2-210ENST00000619121 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
CSMD2-210ENST00000619121 H0YAA0 97 aa3.9□□□□□ -1.79
CSMD2-210ENST00000619121 P0C880 135 aa3.89□□□□□ -1.79
CSMD2-210ENST00000619121 HRNRQ86YZ3 2850 aaPredicted RBP3.87□□□□□ -1.79
CSMD2-210ENST00000619121 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
CSMD2-210ENST00000619121 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
CSMD2-210ENST00000619121 A6NN06 94 aa3.86□□□□□ -1.79
CSMD2-210ENST00000619121 XP32Q5T750 250 aa3.86□□□□□ -1.79
CSMD2-210ENST00000619121 KRTAP10-8P60410 259 aa3.86□□□□□ -1.79
CSMD2-210ENST00000619121 WDFY3Q8IZQ1 3526 aa3.85□□□□□ -1.79
CSMD2-210ENST00000619121 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
CSMD2-210ENST00000619121 ZFHX4Q86UP3 3567 aa3.84□□□□□ -1.8
CSMD2-210ENST00000619121 VPS13CQ709C8 3753 aa3.82□□□□□ -1.8
CSMD2-210ENST00000619121 DNAH6Q9C0G6 4158 aa3.82□□□□□ -1.8
CSMD2-210ENST00000619121 FBN1P35555 2871 aaKnown RBP3.82□□□□□ -1.8
CSMD2-210ENST00000619121 DNAH3Q8TD57 4116 aa3.8□□□□□ -1.8
CSMD2-210ENST00000619121 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
CSMD2-210ENST00000619121 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
CSMD2-210ENST00000619121 ASPMQ8IZT6 3477 aa3.79□□□□□ -1.8
CSMD2-210ENST00000619121 MYO15AQ9UKN7 3530 aa3.78□□□□□ -1.8
CSMD2-210ENST00000619121 KRTAP10-10P60014 251 aa3.77□□□□□ -1.81
CSMD2-210ENST00000619121 SPENQ96T58 3664 aaKnown RBP3.77□□□□□ -1.81
CSMD2-210ENST00000619121 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
CSMD2-210ENST00000619121 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
CSMD2-210ENST00000619121 ALMS1Q8TCU4 4167 aa3.76□□□□□ -1.81
CSMD2-210ENST00000619121 MEGF8Q7Z7M0 2845 aa3.73□□□□□ -1.81
CSMD2-210ENST00000619121 KRTAP7-1Q8IUC3 87 aa3.71□□□□□ -1.82
CSMD2-210ENST00000619121 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
CSMD2-210ENST00000619121 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
CSMD2-210ENST00000619121 A8MU10 97 aa3.69□□□□□ -1.82
CSMD2-210ENST00000619121 KRTAP13-4Q3LI77 160 aa3.68□□□□□ -1.82
CSMD2-210ENST00000619121 SMG1Q96Q15 3661 aaKnown RBP3.67□□□□□ -1.82
CSMD2-210ENST00000619121 RELNP78509 3460 aa3.66□□□□□ -1.82
CSMD2-210ENST00000619121 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
CSMD2-210ENST00000619121 KMT2AQ03164 3969 aa3.63□□□□□ -1.83
CSMD2-210ENST00000619121 INE1O15225 51 aa3.63□□□□□ -1.83
CSMD2-210ENST00000619121 CSMD1Q96PZ7 3565 aa3.63□□□□□ -1.83
CSMD2-210ENST00000619121 VPS13BQ7Z7G8 4022 aa3.63□□□□□ -1.83
CSMD2-210ENST00000619121 ANK2Q01484 3957 aa3.63□□□□□ -1.83
CSMD2-210ENST00000619121 A0A1B0GVY2 172 aa3.62□□□□□ -1.83
CSMD2-210ENST00000619121 OTOGQ6ZRI0 2925 aa3.62□□□□□ -1.83
CSMD2-210ENST00000619121 DMDP11532 3685 aa3.61□□□□□ -1.83
CSMD2-210ENST00000619121 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
CSMD2-210ENST00000619121 ANK3Q12955 4377 aaKnown RBP3.6□□□□□ -1.83
CSMD2-210ENST00000619121 LYSTQ99698 3801 aa3.59□□□□□ -1.84
CSMD2-210ENST00000619121 HECTD4Q9Y4D8 3996 aa3.58□□□□□ -1.84
CSMD2-210ENST00000619121 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
CSMD2-210ENST00000619121 MUC3AQ02505 3323 aa3.57□□□□□ -1.84
CSMD2-210ENST00000619121 ZNF469Q96JG9 3925 aaPredicted RBP3.57□□□□□ -1.84
CSMD2-210ENST00000619121 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
CSMD2-210ENST00000619121 HUWE1Q7Z6Z7 4374 aaKnown RBP3.53□□□□□ -1.84
CSMD2-210ENST00000619121 DNAH2Q9P225 4427 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms