RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 DMAC1Q96GE9 116 aa9.18□□□□□ -0.94
GPN1-212ENST00000616939 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
GPN1-212ENST00000616939 PSORS1C2Q9UIG4 136 aa9.17□□□□□ -0.94
GPN1-212ENST00000616939 LYSTQ99698 3801 aa9.16□□□□□ -0.94
GPN1-212ENST00000616939 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
GPN1-212ENST00000616939 STAB1Q9NY15 2570 aa9.13□□□□□ -0.95
GPN1-212ENST00000616939 A0A087WTM6 91 aa9.11□□□□□ -0.95
GPN1-212ENST00000616939 NUPR2A6NF83 97 aa9.11□□□□□ -0.95
GPN1-212ENST00000616939 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
GPN1-212ENST00000616939 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
GPN1-212ENST00000616939 ANAPC11Q9NYG5 84 aa9.08□□□□□ -0.96
GPN1-212ENST00000616939 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
GPN1-212ENST00000616939 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
GPN1-212ENST00000616939 RTL8CO15255 209 aa9.07□□□□□ -0.96
GPN1-212ENST00000616939 SPINK6Q6UWN8 80 aa9.07□□□□□ -0.96
GPN1-212ENST00000616939 SPATA8Q6RVD6 105 aa9.06□□□□□ -0.96
GPN1-212ENST00000616939 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
GPN1-212ENST00000616939 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
GPN1-212ENST00000616939 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
GPN1-212ENST00000616939 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
GPN1-212ENST00000616939 A0A1B0GU69 56 aa9.03□□□□□ -0.96
GPN1-212ENST00000616939 LINC00313P59037 77 aa9.03□□□□□ -0.96
GPN1-212ENST00000616939 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
GPN1-212ENST00000616939 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
GPN1-212ENST00000616939 VPS13DQ5THJ4 4388 aa9□□□□□ -0.97
GPN1-212ENST00000616939 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
GPN1-212ENST00000616939 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
GPN1-212ENST00000616939 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
GPN1-212ENST00000616939 COL6A5A8TX70 2615 aa8.97□□□□□ -0.97
GPN1-212ENST00000616939 HECTD4Q9Y4D8 3996 aa8.96□□□□□ -0.98
GPN1-212ENST00000616939 UQCR11O14957 56 aa8.94□□□□□ -0.98
GPN1-212ENST00000616939 DNAH7Q8WXX0 4024 aa8.94□□□□□ -0.98
GPN1-212ENST00000616939 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
GPN1-212ENST00000616939 MIR22HGQ0VDD5 57 aa8.93□□□□□ -0.98
GPN1-212ENST00000616939 PRAC1Q96KF2 57 aa8.9□□□□□ -0.98
GPN1-212ENST00000616939 IGKV2D-30A0A075B6S6 120 aa8.86□□□□□ -0.99
GPN1-212ENST00000616939 COL7A1Q02388 2944 aa8.85□□□□□ -0.99
GPN1-212ENST00000616939 CSMD3Q7Z407 3707 aa8.85□□□□□ -0.99
GPN1-212ENST00000616939 ADM2Q7Z4H4 148 aa8.84□□□□□ -0.99
GPN1-212ENST00000616939 RETNLBQ9BQ08 111 aa8.84□□□□□ -0.99
GPN1-212ENST00000616939 LINC01554Q52M75 96 aa8.83□□□□□ -1
GPN1-212ENST00000616939 KRTAP13-2Q52LG2 175 aa8.82□□□□□ -1
GPN1-212ENST00000616939 FRAS1Q86XX4 4008 aa8.8□□□□□ -1
GPN1-212ENST00000616939 C1orf134Q5TEV5 83 aa8.79□□□□□ -1
GPN1-212ENST00000616939 DNAH2Q9P225 4427 aa8.78□□□□□ -1
GPN1-212ENST00000616939 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
GPN1-212ENST00000616939 MGAM2Q2M2H8 2515 aa8.76□□□□□ -1.01
GPN1-212ENST00000616939 STARD9Q9P2P6 4700 aa8.75□□□□□ -1.01
GPN1-212ENST00000616939 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
GPN1-212ENST00000616939 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
GPN1-212ENST00000616939 LY6G6CO95867 125 aa8.67□□□□□ -1.02
GPN1-212ENST00000616939 Q6ZSA8 131 aa8.67□□□□□ -1.02
GPN1-212ENST00000616939 DNAH11Q96DT5 4516 aa8.66□□□□□ -1.02
GPN1-212ENST00000616939 CSAG1Q6PB30 78 aa8.64□□□□□ -1.03
GPN1-212ENST00000616939 SPINK1P00995 79 aa8.62□□□□□ -1.03
GPN1-212ENST00000616939 DNAH5Q8TE73 4624 aa8.61□□□□□ -1.03
GPN1-212ENST00000616939 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
GPN1-212ENST00000616939 FBN3Q75N90 2809 aa8.61□□□□□ -1.03
GPN1-212ENST00000616939 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
GPN1-212ENST00000616939 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
GPN1-212ENST00000616939 KMT2AQ03164 3969 aa8.58□□□□□ -1.04
GPN1-212ENST00000616939 A8MUU9 505 aa8.57□□□□□ -1.04
GPN1-212ENST00000616939 Q8N1X5 172 aa8.57□□□□□ -1.04
GPN1-212ENST00000616939 TYMSOSQ8TAI1 123 aa8.55□□□□□ -1.04
GPN1-212ENST00000616939 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
GPN1-212ENST00000616939 H0YAA0 97 aa8.54□□□□□ -1.04
GPN1-212ENST00000616939 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
GPN1-212ENST00000616939 SACSQ9NZJ4 4579 aa8.48□□□□□ -1.05
GPN1-212ENST00000616939 TGP01266 2768 aa8.47□□□□□ -1.05
GPN1-212ENST00000616939 A0A1B0GU33 70 aa8.46□□□□□ -1.06
GPN1-212ENST00000616939 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.06
GPN1-212ENST00000616939 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.06
GPN1-212ENST00000616939 C20orf166-AS1Q96NR2 134 aa8.46□□□□□ -1.06
GPN1-212ENST00000616939 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
GPN1-212ENST00000616939 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
GPN1-212ENST00000616939 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
GPN1-212ENST00000616939 PKD1P98161 4303 aa8.39□□□□□ -1.07
GPN1-212ENST00000616939 H3BS24 57 aa8.35□□□□□ -1.07
GPN1-212ENST00000616939 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
GPN1-212ENST00000616939 K7ERS5 55 aa8.31□□□□□ -1.08
GPN1-212ENST00000616939 FAT2Q9NYQ8 4349 aa8.29□□□□□ -1.08
GPN1-212ENST00000616939 COX6B2Q6YFQ2 88 aa8.28□□□□□ -1.08
GPN1-212ENST00000616939 ROMO1P60602 79 aa8.26□□□□□ -1.09
GPN1-212ENST00000616939 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
GPN1-212ENST00000616939 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
GPN1-212ENST00000616939 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
GPN1-212ENST00000616939 APOBP04114 4563 aaKnown RBP8.11□□□□□ -1.11
GPN1-212ENST00000616939 KRTAP10-6P60371 365 aaPredicted RBP8.1□□□□□ -1.11
GPN1-212ENST00000616939 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
GPN1-212ENST00000616939 PKHD1P08F94 4074 aa8.08□□□□□ -1.12
GPN1-212ENST00000616939 HYDINQ4G0P3 5121 aa8.07□□□□□ -1.12
GPN1-212ENST00000616939 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
GPN1-212ENST00000616939 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
GPN1-212ENST00000616939 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
GPN1-212ENST00000616939 SMR3BP02814 79 aaPredicted RBP8□□□□□ -1.13
GPN1-212ENST00000616939 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
GPN1-212ENST00000616939 P0C880 135 aa7.99□□□□□ -1.13
GPN1-212ENST00000616939 DYNC1H1Q14204 4646 aaKnown RBP7.98□□□□□ -1.13
GPN1-212ENST00000616939 TPRXLQ17RH7 258 aa7.95□□□□□ -1.14
GPN1-212ENST00000616939 S4R3F8 94 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms