RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 MGAQ8IWI9 3026 aa4.47□□□□□ -1.69
ALMS1-206ENST00000613296 C5orf42Q9H799 3197 aa4.46□□□□□ -1.7
ALMS1-206ENST00000613296 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
ALMS1-206ENST00000613296 CRYBG3Q68DQ2 2970 aa4.44□□□□□ -1.7
ALMS1-206ENST00000613296 KRTAP13-1Q8IUC0 172 aa4.43□□□□□ -1.7
ALMS1-206ENST00000613296 XP32Q5T750 250 aa4.41□□□□□ -1.7
ALMS1-206ENST00000613296 ZANQ9Y493 2812 aa4.4□□□□□ -1.71
ALMS1-206ENST00000613296 TNRC18O15417 2968 aaPredicted RBP4.39□□□□□ -1.71
ALMS1-206ENST00000613296 FRYLO94915 3013 aa4.38□□□□□ -1.71
ALMS1-206ENST00000613296 TENM2Q9NT68 2774 aa4.37□□□□□ -1.71
ALMS1-206ENST00000613296 PKD1L1Q8TDX9 2849 aa4.37□□□□□ -1.71
ALMS1-206ENST00000613296 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
ALMS1-206ENST00000613296 KRTAP7-1Q8IUC3 87 aa4.36□□□□□ -1.71
ALMS1-206ENST00000613296 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
ALMS1-206ENST00000613296 DCHS2Q6V1P9 2916 aa4.3□□□□□ -1.72
ALMS1-206ENST00000613296 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
ALMS1-206ENST00000613296 XIRP2A4UGR9 3374 aa4.29□□□□□ -1.72
ALMS1-206ENST00000613296 COL12A1Q99715 3063 aa4.28□□□□□ -1.72
ALMS1-206ENST00000613296 REV3LO60673 3130 aa4.28□□□□□ -1.72
ALMS1-206ENST00000613296 PRUNE2Q8WUY3 3088 aa4.27□□□□□ -1.73
ALMS1-206ENST00000613296 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
ALMS1-206ENST00000613296 TACC2O95359 2948 aa4.24□□□□□ -1.73
ALMS1-206ENST00000613296 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
ALMS1-206ENST00000613296 MKI67P46013 3256 aaKnown RBP4.2□□□□□ -1.74
ALMS1-206ENST00000613296 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
ALMS1-206ENST00000613296 INE1O15225 51 aa4.18□□□□□ -1.74
ALMS1-206ENST00000613296 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
ALMS1-206ENST00000613296 ZZEF1O43149 2961 aa4.17□□□□□ -1.74
ALMS1-206ENST00000613296 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
ALMS1-206ENST00000613296 LAMA1P25391 3075 aa4.16□□□□□ -1.74
ALMS1-206ENST00000613296 FREM2Q5SZK8 3169 aa4.13□□□□□ -1.75
ALMS1-206ENST00000613296 MXRA5Q9NR99 2828 aa4.13□□□□□ -1.75
ALMS1-206ENST00000613296 KRTAP21-3Q3LHN1 58 aa4.11□□□□□ -1.75
ALMS1-206ENST00000613296 WDFY4Q6ZS81 3184 aa4.11□□□□□ -1.75
ALMS1-206ENST00000613296 CELSR1Q9NYQ6 3014 aa4.1□□□□□ -1.75
ALMS1-206ENST00000613296 LAMA3Q16787 3333 aa4.09□□□□□ -1.75
ALMS1-206ENST00000613296 USP34Q70CQ2 3546 aa4.09□□□□□ -1.75
ALMS1-206ENST00000613296 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
ALMS1-206ENST00000613296 BRCA2P51587 3418 aa4.09□□□□□ -1.76
ALMS1-206ENST00000613296 DMXL1Q9Y485 3027 aa4.08□□□□□ -1.76
ALMS1-206ENST00000613296 NBEAQ8NFP9 2946 aa4.08□□□□□ -1.76
ALMS1-206ENST00000613296 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
ALMS1-206ENST00000613296 FBN2P35556 2912 aa4.07□□□□□ -1.76
ALMS1-206ENST00000613296 CELSR3Q9NYQ7 3312 aa4.07□□□□□ -1.76
ALMS1-206ENST00000613296 VPS13AQ96RL7 3174 aa4.06□□□□□ -1.76
ALMS1-206ENST00000613296 CDH23Q9H251 3354 aa4.06□□□□□ -1.76
ALMS1-206ENST00000613296 RANBP2P49792 3224 aaKnown RBP4.04□□□□□ -1.76
ALMS1-206ENST00000613296 UNC80Q8N2C7 3258 aa4.03□□□□□ -1.76
ALMS1-206ENST00000613296 DNAH14Q0VDD8 3507 aa4.01□□□□□ -1.77
ALMS1-206ENST00000613296 ATMQ13315 3056 aa3.99□□□□□ -1.77
ALMS1-206ENST00000613296 MEGF8Q7Z7M0 2845 aa3.97□□□□□ -1.77
ALMS1-206ENST00000613296 HRNRQ86YZ3 2850 aaPredicted RBP3.94□□□□□ -1.78
ALMS1-206ENST00000613296 ADGRG4Q8IZF6 3080 aa3.94□□□□□ -1.78
ALMS1-206ENST00000613296 FBN3Q75N90 2809 aa3.93□□□□□ -1.78
ALMS1-206ENST00000613296 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
ALMS1-206ENST00000613296 BOD1L1Q8NFC6 3051 aa3.91□□□□□ -1.78
ALMS1-206ENST00000613296 HTTP42858 3142 aa3.9□□□□□ -1.78
ALMS1-206ENST00000613296 COL6A3P12111 3177 aa3.89□□□□□ -1.79
ALMS1-206ENST00000613296 SPEGQ15772 3267 aa3.88□□□□□ -1.79
ALMS1-206ENST00000613296 VCANP13611 3396 aa3.88□□□□□ -1.79
ALMS1-206ENST00000613296 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.79
ALMS1-206ENST00000613296 SZT2Q5T011 3432 aa3.84□□□□□ -1.79
ALMS1-206ENST00000613296 NBPF19A0A087WUL8 3843 aa3.83□□□□□ -1.8
ALMS1-206ENST00000613296 SPTBN5Q9NRC6 3674 aaKnown RBP3.8□□□□□ -1.8
ALMS1-206ENST00000613296 FBN1P35555 2871 aaKnown RBP3.79□□□□□ -1.8
ALMS1-206ENST00000613296 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
ALMS1-206ENST00000613296 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
ALMS1-206ENST00000613296 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
ALMS1-206ENST00000613296 CFAP47Q6ZTR5 3102 aa3.73□□□□□ -1.81
ALMS1-206ENST00000613296 OTOGQ6ZRI0 2925 aa3.72□□□□□ -1.81
ALMS1-206ENST00000613296 ASPMQ8IZT6 3477 aa3.72□□□□□ -1.81
ALMS1-206ENST00000613296 EYSQ5T1H1 3165 aa3.7□□□□□ -1.82
ALMS1-206ENST00000613296 ZFHX4Q86UP3 3567 aa3.68□□□□□ -1.82
ALMS1-206ENST00000613296 LORP23490 312 aaPredicted RBP3.66□□□□□ -1.82
ALMS1-206ENST00000613296 MYO15AQ9UKN7 3530 aa3.64□□□□□ -1.83
ALMS1-206ENST00000613296 WDFY3Q8IZQ1 3526 aa3.64□□□□□ -1.83
ALMS1-206ENST00000613296 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
ALMS1-206ENST00000613296 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
ALMS1-206ENST00000613296 LOC400499M0QZD8 3231 aa3.58□□□□□ -1.84
ALMS1-206ENST00000613296 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
ALMS1-206ENST00000613296 KRTAP3-2Q9BYR7 98 aa3.55□□□□□ -1.84
ALMS1-206ENST00000613296 LAMA5O15230 3695 aa3.55□□□□□ -1.84
ALMS1-206ENST00000613296 ZFHX3Q15911 3703 aa3.54□□□□□ -1.84
ALMS1-206ENST00000613296 DMDP11532 3685 aa3.53□□□□□ -1.84
ALMS1-206ENST00000613296 KRTAP4-5Q9BYR2 181 aa3.51□□□□□ -1.85
ALMS1-206ENST00000613296 KRTAP3-3Q9BYR6 98 aa3.5□□□□□ -1.85
ALMS1-206ENST00000613296 DCHS1Q96JQ0 3298 aa3.5□□□□□ -1.85
ALMS1-206ENST00000613296 RELNP78509 3460 aa3.46□□□□□ -1.86
ALMS1-206ENST00000613296 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
ALMS1-206ENST00000613296 SPENQ96T58 3664 aaKnown RBP3.43□□□□□ -1.86
ALMS1-206ENST00000613296 SMG1Q96Q15 3661 aaKnown RBP3.4□□□□□ -1.86
ALMS1-206ENST00000613296 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
ALMS1-206ENST00000613296 CSMD1Q96PZ7 3565 aa3.33□□□□□ -1.88
ALMS1-206ENST00000613296 BSNQ9UPA5 3926 aa3.32□□□□□ -1.88
ALMS1-206ENST00000613296 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
ALMS1-206ENST00000613296 MUC3AQ02505 3323 aa3.28□□□□□ -1.88
ALMS1-206ENST00000613296 KRTAP10-4P60372 401 aaPredicted RBP3.28□□□□□ -1.88
ALMS1-206ENST00000613296 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
ALMS1-206ENST00000613296 TRRAPQ9Y4A5 3859 aa3.22□□□□□ -1.89
ALMS1-206ENST00000613296 VPS13CQ709C8 3753 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms