RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
ALMS1-206ENST00000613296 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
ALMS1-206ENST00000613296 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
ALMS1-206ENST00000613296 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
ALMS1-206ENST00000613296 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
ALMS1-206ENST00000613296 MYT1Q01538 1121 aa13.15□□□□□ -0.3
ALMS1-206ENST00000613296 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
ALMS1-206ENST00000613296 APLP2Q06481 763 aa12.94□□□□□ -0.34
ALMS1-206ENST00000613296 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
ALMS1-206ENST00000613296 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
ALMS1-206ENST00000613296 NEFLP07196 543 aa12.85□□□□□ -0.35
ALMS1-206ENST00000613296 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
ALMS1-206ENST00000613296 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
ALMS1-206ENST00000613296 FAM9AQ8IZU1 332 aaPredicted RBP12.7□□□□□ -0.38
ALMS1-206ENST00000613296 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
ALMS1-206ENST00000613296 RANGAP1P46060 587 aaPredicted RBP12.63□□□□□ -0.39
ALMS1-206ENST00000613296 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
ALMS1-206ENST00000613296 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.41
ALMS1-206ENST00000613296 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
ALMS1-206ENST00000613296 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
ALMS1-206ENST00000613296 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
ALMS1-206ENST00000613296 CHIC1Q5VXU3 224 aa12.28□□□□□ -0.44
ALMS1-206ENST00000613296 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
ALMS1-206ENST00000613296 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.46
ALMS1-206ENST00000613296 POLR3GLQ9BT43 218 aa12.18□□□□□ -0.46
ALMS1-206ENST00000613296 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
ALMS1-206ENST00000613296 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
ALMS1-206ENST00000613296 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
ALMS1-206ENST00000613296 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
ALMS1-206ENST00000613296 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
ALMS1-206ENST00000613296 EIF5BO60841 1220 aaKnown RBP11.97□□□□□ -0.49
ALMS1-206ENST00000613296 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
ALMS1-206ENST00000613296 BCL11AQ9H165 835 aa11.93□□□□□ -0.5
ALMS1-206ENST00000613296 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
ALMS1-206ENST00000613296 ANP32BQ92688 251 aaKnown RBP11.87□□□□□ -0.51
ALMS1-206ENST00000613296 ITGAEP38570 1179 aa11.86□□□□□ -0.51
ALMS1-206ENST00000613296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
ALMS1-206ENST00000613296 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
ALMS1-206ENST00000613296 HRCP23327 699 aa11.81□□□□□ -0.52
ALMS1-206ENST00000613296 BCANQ96GW7 911 aa11.78□□□□□ -0.52
ALMS1-206ENST00000613296 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.52
ALMS1-206ENST00000613296 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
ALMS1-206ENST00000613296 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
ALMS1-206ENST00000613296 ANP32AP39687 249 aaKnown RBP11.74□□□□□ -0.53
ALMS1-206ENST00000613296 HSP90AA1P07900 732 aaKnown RBP11.69□□□□□ -0.54
ALMS1-206ENST00000613296 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
ALMS1-206ENST00000613296 CDK11BP21127 795 aaKnown RBP11.65□□□□□ -0.54
ALMS1-206ENST00000613296 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
ALMS1-206ENST00000613296 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
ALMS1-206ENST00000613296 GTF3C3Q9Y5Q9 886 aa11.56□□□□□ -0.56
ALMS1-206ENST00000613296 ARXQ96QS3 562 aa11.55□□□□□ -0.56
ALMS1-206ENST00000613296 NEFMP07197 916 aa11.55□□□□□ -0.56
ALMS1-206ENST00000613296 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
ALMS1-206ENST00000613296 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.56
ALMS1-206ENST00000613296 UPF2Q9HAU5 1272 aaKnown RBP11.52□□□□□ -0.56
ALMS1-206ENST00000613296 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
ALMS1-206ENST00000613296 ANP32CO43423 234 aa11.5□□□□□ -0.57
ALMS1-206ENST00000613296 NISCHQ9Y2I1 1504 aa11.47□□□□□ -0.57
ALMS1-206ENST00000613296 NBR1Q14596 966 aa11.44□□□□□ -0.58
ALMS1-206ENST00000613296 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
ALMS1-206ENST00000613296 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
ALMS1-206ENST00000613296 NEUROD1Q13562 356 aa11.37□□□□□ -0.59
ALMS1-206ENST00000613296 A0A0G2JS52 829 aa11.35□□□□□ -0.59
ALMS1-206ENST00000613296 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
ALMS1-206ENST00000613296 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
ALMS1-206ENST00000613296 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
ALMS1-206ENST00000613296 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
ALMS1-206ENST00000613296 ZRSR1Q15695 479 aaKnown RBP11.27□□□□□ -0.6
ALMS1-206ENST00000613296 ARID3CA6NKF2 412 aa11.26□□□□□ -0.61
ALMS1-206ENST00000613296 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
ALMS1-206ENST00000613296 NCLP19338 710 aaKnown RBP11.25□□□□□ -0.61
ALMS1-206ENST00000613296 DNTTIP2Q5QJE6 756 aaKnown RBP11.25□□□□□ -0.61
ALMS1-206ENST00000613296 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.23□□□□□ -0.61
ALMS1-206ENST00000613296 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
ALMS1-206ENST00000613296 NAP1L5Q96NT1 182 aaPredicted RBP11.22□□□□□ -0.61
ALMS1-206ENST00000613296 SENP3Q9H4L4 574 aaPredicted RBP11.21□□□□□ -0.61
ALMS1-206ENST00000613296 GOLGA6L22H0YM25 854 aa11.21□□□□□ -0.62
ALMS1-206ENST00000613296 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
ALMS1-206ENST00000613296 ACIN1Q9UKV3 1341 aaKnown RBP11.19□□□□□ -0.62
ALMS1-206ENST00000613296 FBLN2P98095 1184 aa11.19□□□□□ -0.62
ALMS1-206ENST00000613296 FKBP8Q14318 412 aa11.19□□□□□ -0.62
ALMS1-206ENST00000613296 ANP32EQ9BTT0 268 aa11.18□□□□□ -0.62
ALMS1-206ENST00000613296 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
ALMS1-206ENST00000613296 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
ALMS1-206ENST00000613296 GOLGA6L6A8MZA4 724 aa11.17□□□□□ -0.62
ALMS1-206ENST00000613296 BECN1Q14457 450 aa11.17□□□□□ -0.62
ALMS1-206ENST00000613296 ERICH6BQ5W0A0 696 aa11.14□□□□□ -0.63
ALMS1-206ENST00000613296 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
ALMS1-206ENST00000613296 ZBTB7CA1YPR0 619 aa11.12□□□□□ -0.63
ALMS1-206ENST00000613296 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
ALMS1-206ENST00000613296 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
ALMS1-206ENST00000613296 CLSTN1O94985 981 aa11.09□□□□□ -0.63
ALMS1-206ENST00000613296 DDRGK1Q96HY6 314 aa11.09□□□□□ -0.63
ALMS1-206ENST00000613296 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
ALMS1-206ENST00000613296 NRDCO43847 1150 aa11.08□□□□□ -0.64
ALMS1-206ENST00000613296 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
ALMS1-206ENST00000613296 CASC1Q6TDU7 716 aa11.04□□□□□ -0.64
ALMS1-206ENST00000613296 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
ALMS1-206ENST00000613296 TAOK2Q9UL54 1235 aa11.04□□□□□ -0.64
ALMS1-206ENST00000613296 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms