RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 DNAH7Q8WXX0 4024 aa10.38□□□□□ -0.75
ARHGEF1-213ENST00000595897 CDC42SE1Q9NRR8 79 aa10.36□□□□□ -0.75
ARHGEF1-213ENST00000595897 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
ARHGEF1-213ENST00000595897 KTN1-AS1Q86SY8 53 aa10.34□□□□□ -0.75
ARHGEF1-213ENST00000595897 ZNF861PO60384 105 aa10.33□□□□□ -0.76
ARHGEF1-213ENST00000595897 A0A087WTM6 91 aa10.32□□□□□ -0.76
ARHGEF1-213ENST00000595897 NUPR2A6NF83 97 aa10.32□□□□□ -0.76
ARHGEF1-213ENST00000595897 RTL8CO15255 209 aa10.31□□□□□ -0.76
ARHGEF1-213ENST00000595897 PLAC8Q9NZF1 115 aa10.3□□□□□ -0.76
ARHGEF1-213ENST00000595897 PLECQ15149 4684 aaKnown RBP10.29□□□□□ -0.76
ARHGEF1-213ENST00000595897 SPINK7P58062 85 aa10.29□□□□□ -0.76
ARHGEF1-213ENST00000595897 Q5W150 140 aa10.29□□□□□ -0.76
ARHGEF1-213ENST00000595897 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
ARHGEF1-213ENST00000595897 CIRBP-AS1Q8TBR5 109 aa10.28□□□□□ -0.76
ARHGEF1-213ENST00000595897 A6NN06 94 aa10.26□□□□□ -0.77
ARHGEF1-213ENST00000595897 FRAS1Q86XX4 4008 aa10.22□□□□□ -0.77
ARHGEF1-213ENST00000595897 ACYP2P14621 99 aa10.2□□□□□ -0.78
ARHGEF1-213ENST00000595897 DYNC2H1Q8NCM8 4307 aaKnown RBP10.19□□□□□ -0.78
ARHGEF1-213ENST00000595897 KRTAP13-3Q3SY46 172 aa10.18□□□□□ -0.78
ARHGEF1-213ENST00000595897 RBM12B-AS1Q9P1G2 102 aa10.17□□□□□ -0.78
ARHGEF1-213ENST00000595897 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
ARHGEF1-213ENST00000595897 IGLV7-43P04211 117 aa10.17□□□□□ -0.78
ARHGEF1-213ENST00000595897 RETNLBQ9BQ08 111 aa10.15□□□□□ -0.78
ARHGEF1-213ENST00000595897 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
ARHGEF1-213ENST00000595897 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
ARHGEF1-213ENST00000595897 LINC00313P59037 77 aa10.11□□□□□ -0.79
ARHGEF1-213ENST00000595897 TGP01266 2768 aa10.11□□□□□ -0.79
ARHGEF1-213ENST00000595897 SSBP3-AS1Q7Z2R9 100 aa10.1□□□□□ -0.79
ARHGEF1-213ENST00000595897 HECTD4Q9Y4D8 3996 aa10.1□□□□□ -0.79
ARHGEF1-213ENST00000595897 DMAC1Q96GE9 116 aa10.09□□□□□ -0.79
ARHGEF1-213ENST00000595897 FAM229AH3BQW9 127 aa10.08□□□□□ -0.8
ARHGEF1-213ENST00000595897 STARD9Q9P2P6 4700 aa10.08□□□□□ -0.8
ARHGEF1-213ENST00000595897 MEGF8Q7Z7M0 2845 aa10.06□□□□□ -0.8
ARHGEF1-213ENST00000595897 VPS13DQ5THJ4 4388 aa10.05□□□□□ -0.8
ARHGEF1-213ENST00000595897 C1orf134Q5TEV5 83 aa10.05□□□□□ -0.8
ARHGEF1-213ENST00000595897 A0A1B0GU69 56 aa10.05□□□□□ -0.8
ARHGEF1-213ENST00000595897 KMT2AQ03164 3969 aa10.02□□□□□ -0.81
ARHGEF1-213ENST00000595897 DNAH17Q9UFH2 4485 aa10.01□□□□□ -0.81
ARHGEF1-213ENST00000595897 IGKV2-30P06310 120 aa10□□□□□ -0.81
ARHGEF1-213ENST00000595897 DNAH2Q9P225 4427 aa9.98□□□□□ -0.81
ARHGEF1-213ENST00000595897 IGKV2D-30A0A075B6S6 120 aa9.96□□□□□ -0.82
ARHGEF1-213ENST00000595897 FBN3Q75N90 2809 aa9.96□□□□□ -0.82
ARHGEF1-213ENST00000595897 LY6G6CO95867 125 aa9.93□□□□□ -0.82
ARHGEF1-213ENST00000595897 KRTAP13-2Q52LG2 175 aa9.93□□□□□ -0.82
ARHGEF1-213ENST00000595897 ALMS1Q8TCU4 4167 aa9.9□□□□□ -0.82
ARHGEF1-213ENST00000595897 PRKDCP78527 4128 aaKnown RBP9.9□□□□□ -0.83
ARHGEF1-213ENST00000595897 PRAC1Q96KF2 57 aa9.89□□□□□ -0.83
ARHGEF1-213ENST00000595897 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
ARHGEF1-213ENST00000595897 UQCR11O14957 56 aa9.88□□□□□ -0.83
ARHGEF1-213ENST00000595897 MIR22HGQ0VDD5 57 aa9.88□□□□□ -0.83
ARHGEF1-213ENST00000595897 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
ARHGEF1-213ENST00000595897 SPATA8Q6RVD6 105 aa9.87□□□□□ -0.83
ARHGEF1-213ENST00000595897 DNAH6Q9C0G6 4158 aa9.84□□□□□ -0.83
ARHGEF1-213ENST00000595897 ADM2Q7Z4H4 148 aa9.83□□□□□ -0.84
ARHGEF1-213ENST00000595897 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
ARHGEF1-213ENST00000595897 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
ARHGEF1-213ENST00000595897 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
ARHGEF1-213ENST00000595897 SPINK1P00995 79 aa9.79□□□□□ -0.84
ARHGEF1-213ENST00000595897 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
ARHGEF1-213ENST00000595897 KRTAP1-4P0C5Y4 121 aa9.75□□□□□ -0.85
ARHGEF1-213ENST00000595897 TYMSOSQ8TAI1 123 aa9.72□□□□□ -0.85
ARHGEF1-213ENST00000595897 Q8N1X5 172 aa9.72□□□□□ -0.85
ARHGEF1-213ENST00000595897 DNAH5Q8TE73 4624 aa9.72□□□□□ -0.85
ARHGEF1-213ENST00000595897 LRP1BQ9NZR2 4599 aa9.72□□□□□ -0.85
ARHGEF1-213ENST00000595897 Q6ZSA8 131 aa9.7□□□□□ -0.86
ARHGEF1-213ENST00000595897 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
ARHGEF1-213ENST00000595897 H3BS24 57 aa9.6□□□□□ -0.87
ARHGEF1-213ENST00000595897 VPS13BQ7Z7G8 4022 aa9.58□□□□□ -0.88
ARHGEF1-213ENST00000595897 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
ARHGEF1-213ENST00000595897 LINC00304Q8N9R0 145 aa9.56□□□□□ -0.88
ARHGEF1-213ENST00000595897 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
ARHGEF1-213ENST00000595897 PKD1P98161 4303 aa9.49□□□□□ -0.89
ARHGEF1-213ENST00000595897 H0YAA0 97 aa9.45□□□□□ -0.9
ARHGEF1-213ENST00000595897 RPS29P62273 56 aaKnown RBP9.44□□□□□ -0.9
ARHGEF1-213ENST00000595897 FLG2Q5D862 2391 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF1-213ENST00000595897 DNHD1Q96M86 4753 aa9.44□□□□□ -0.9
ARHGEF1-213ENST00000595897 FAT2Q9NYQ8 4349 aa9.43□□□□□ -0.9
ARHGEF1-213ENST00000595897 A0A1B0GU33 70 aa9.42□□□□□ -0.9
ARHGEF1-213ENST00000595897 HYDINQ4G0P3 5121 aa9.41□□□□□ -0.9
ARHGEF1-213ENST00000595897 SMR3BP02814 79 aaPredicted RBP9.38□□□□□ -0.91
ARHGEF1-213ENST00000595897 A8MUU9 505 aa9.37□□□□□ -0.91
ARHGEF1-213ENST00000595897 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
ARHGEF1-213ENST00000595897 KRTAP3-1Q9BYR8 98 aa9.37□□□□□ -0.91
ARHGEF1-213ENST00000595897 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
ARHGEF1-213ENST00000595897 PKHD1P08F94 4074 aa9.3□□□□□ -0.92
ARHGEF1-213ENST00000595897 KRTAP25-1Q3LHN0 102 aa9.24□□□□□ -0.93
ARHGEF1-213ENST00000595897 K7ERS5 55 aa9.24□□□□□ -0.93
ARHGEF1-213ENST00000595897 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
ARHGEF1-213ENST00000595897 SACSQ9NZJ4 4579 aa9.19□□□□□ -0.94
ARHGEF1-213ENST00000595897 FAT1Q14517 4588 aa9.17□□□□□ -0.94
ARHGEF1-213ENST00000595897 CRIPTQ9P021 101 aa9.15□□□□□ -0.94
ARHGEF1-213ENST00000595897 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
ARHGEF1-213ENST00000595897 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
ARHGEF1-213ENST00000595897 KRTAP10-4P60372 401 aaPredicted RBP9.07□□□□□ -0.96
ARHGEF1-213ENST00000595897 PKHD1L1Q86WI1 4243 aa9.05□□□□□ -0.96
ARHGEF1-213ENST00000595897 ROMO1P60602 79 aa9.04□□□□□ -0.96
ARHGEF1-213ENST00000595897 A0A0D9SG42 100 aa9.01□□□□□ -0.97
ARHGEF1-213ENST00000595897 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
ARHGEF1-213ENST00000595897 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
ARHGEF1-213ENST00000595897 A0A1B0GVY2 172 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms