RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 PLAC8Q9NZF1 115 aa12.84□□□□□ -0.35
DENND4A-208ENST00000568515 PLECQ15149 4684 aaKnown RBP12.83□□□□□ -0.35
DENND4A-208ENST00000568515 ATP11AUNQ6ZP68 121 aa12.83□□□□□ -0.36
DENND4A-208ENST00000568515 IGLV5-52A0A0A0MRZ9 124 aa12.82□□□□□ -0.36
DENND4A-208ENST00000568515 A0A087WTM6 91 aa12.78□□□□□ -0.36
DENND4A-208ENST00000568515 ZNF861PO60384 105 aa12.78□□□□□ -0.36
DENND4A-208ENST00000568515 CDC42SE1Q9NRR8 79 aa12.78□□□□□ -0.36
DENND4A-208ENST00000568515 NUPR2A6NF83 97 aa12.77□□□□□ -0.37
DENND4A-208ENST00000568515 RTL8CO15255 209 aa12.73□□□□□ -0.37
DENND4A-208ENST00000568515 DNAH8Q96JB1 4490 aa12.72□□□□□ -0.37
DENND4A-208ENST00000568515 Q5W150 140 aa12.72□□□□□ -0.37
DENND4A-208ENST00000568515 KTN1-AS1Q86SY8 53 aa12.72□□□□□ -0.37
DENND4A-208ENST00000568515 SPINK6Q6UWN8 80 aa12.71□□□□□ -0.37
DENND4A-208ENST00000568515 FRAS1Q86XX4 4008 aa12.71□□□□□ -0.38
DENND4A-208ENST00000568515 HECTD4Q9Y4D8 3996 aa12.7□□□□□ -0.38
DENND4A-208ENST00000568515 KRTAP13-3Q3SY46 172 aa12.69□□□□□ -0.38
DENND4A-208ENST00000568515 A6NN06 94 aa12.68□□□□□ -0.38
DENND4A-208ENST00000568515 VPS13DQ5THJ4 4388 aa12.67□□□□□ -0.38
DENND4A-208ENST00000568515 SPINK7P58062 85 aa12.66□□□□□ -0.38
DENND4A-208ENST00000568515 PRR26Q8N8Z3 221 aa12.64□□□□□ -0.39
DENND4A-208ENST00000568515 CIRBP-AS1Q8TBR5 109 aa12.62□□□□□ -0.39
DENND4A-208ENST00000568515 IGLV7-43P04211 117 aa12.58□□□□□ -0.4
DENND4A-208ENST00000568515 ACYP2P14621 99 aa12.57□□□□□ -0.4
DENND4A-208ENST00000568515 STARD9Q9P2P6 4700 aa12.57□□□□□ -0.4
DENND4A-208ENST00000568515 DNAH17Q9UFH2 4485 aa12.56□□□□□ -0.4
DENND4A-208ENST00000568515 C8orf87E5RJ46 101 aa12.56□□□□□ -0.4
DENND4A-208ENST00000568515 ALMS1Q8TCU4 4167 aa12.53□□□□□ -0.4
DENND4A-208ENST00000568515 SSBP3-AS1Q7Z2R9 100 aa12.52□□□□□ -0.41
DENND4A-208ENST00000568515 RBM12B-AS1Q9P1G2 102 aa12.5□□□□□ -0.41
DENND4A-208ENST00000568515 DMAC1Q96GE9 116 aa12.49□□□□□ -0.41
DENND4A-208ENST00000568515 PRKDCP78527 4128 aaKnown RBP12.48□□□□□ -0.41
DENND4A-208ENST00000568515 KMT2AQ03164 3969 aa12.47□□□□□ -0.41
DENND4A-208ENST00000568515 DNAH2Q9P225 4427 aa12.47□□□□□ -0.41
DENND4A-208ENST00000568515 LINC00313P59037 77 aa12.47□□□□□ -0.41
DENND4A-208ENST00000568515 C7orf65Q6ZTY9 151 aa12.47□□□□□ -0.41
DENND4A-208ENST00000568515 FAM229AH3BQW9 127 aa12.45□□□□□ -0.42
DENND4A-208ENST00000568515 FBN3Q75N90 2809 aa12.42□□□□□ -0.42
DENND4A-208ENST00000568515 RETNLBQ9BQ08 111 aa12.42□□□□□ -0.42
DENND4A-208ENST00000568515 C1orf134Q5TEV5 83 aa12.4□□□□□ -0.42
DENND4A-208ENST00000568515 IGKV2-30P06310 120 aa12.39□□□□□ -0.43
DENND4A-208ENST00000568515 MEGF8Q7Z7M0 2845 aa12.37□□□□□ -0.43
DENND4A-208ENST00000568515 TGP01266 2768 aa12.35□□□□□ -0.43
DENND4A-208ENST00000568515 A0A1B0GU69 56 aa12.33□□□□□ -0.44
DENND4A-208ENST00000568515 KRTAP13-2Q52LG2 175 aa12.32□□□□□ -0.44
DENND4A-208ENST00000568515 KRTAP16-1A8MUX0 517 aa12.29□□□□□ -0.44
DENND4A-208ENST00000568515 DNAH11Q96DT5 4516 aa12.29□□□□□ -0.44
DENND4A-208ENST00000568515 DNAH6Q9C0G6 4158 aa12.26□□□□□ -0.45
DENND4A-208ENST00000568515 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
DENND4A-208ENST00000568515 SPATA8Q6RVD6 105 aa12.23□□□□□ -0.45
DENND4A-208ENST00000568515 IGKV2D-30A0A075B6S6 120 aa12.2□□□□□ -0.46
DENND4A-208ENST00000568515 LY6G6CO95867 125 aa12.19□□□□□ -0.46
DENND4A-208ENST00000568515 DNAH5Q8TE73 4624 aa12.18□□□□□ -0.46
DENND4A-208ENST00000568515 UQCR11O14957 56 aa12.14□□□□□ -0.47
DENND4A-208ENST00000568515 MIR22HGQ0VDD5 57 aa12.14□□□□□ -0.47
DENND4A-208ENST00000568515 PRAC1Q96KF2 57 aa12.12□□□□□ -0.47
DENND4A-208ENST00000568515 PLA2G1BP04054 148 aaKnown RBP12.12□□□□□ -0.47
DENND4A-208ENST00000568515 KRTAP1-4P0C5Y4 121 aa12.12□□□□□ -0.47
DENND4A-208ENST00000568515 Q6ZSA8 131 aa12.09□□□□□ -0.47
DENND4A-208ENST00000568515 KRTAP10-1P60331 282 aa12.08□□□□□ -0.48
DENND4A-208ENST00000568515 ADM2Q7Z4H4 148 aa12.08□□□□□ -0.48
DENND4A-208ENST00000568515 LRP1BQ9NZR2 4599 aa12.07□□□□□ -0.48
DENND4A-208ENST00000568515 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
DENND4A-208ENST00000568515 TYMSOSQ8TAI1 123 aa11.98□□□□□ -0.49
DENND4A-208ENST00000568515 SPINK1P00995 79 aa11.96□□□□□ -0.49
DENND4A-208ENST00000568515 VPS13BQ7Z7G8 4022 aa11.95□□□□□ -0.5
DENND4A-208ENST00000568515 PKD1P98161 4303 aa11.95□□□□□ -0.5
DENND4A-208ENST00000568515 Q8N1X5 172 aa11.93□□□□□ -0.5
DENND4A-208ENST00000568515 FAT2Q9NYQ8 4349 aa11.85□□□□□ -0.51
DENND4A-208ENST00000568515 LINC01554Q52M75 96 aa11.83□□□□□ -0.52
DENND4A-208ENST00000568515 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
DENND4A-208ENST00000568515 HYDINQ4G0P3 5121 aa11.78□□□□□ -0.52
DENND4A-208ENST00000568515 RPS29P62273 56 aaKnown RBP11.77□□□□□ -0.53
DENND4A-208ENST00000568515 CSAG1Q6PB30 78 aa11.74□□□□□ -0.53
DENND4A-208ENST00000568515 DNHD1Q96M86 4753 aa11.68□□□□□ -0.54
DENND4A-208ENST00000568515 H0YAA0 97 aa11.68□□□□□ -0.54
DENND4A-208ENST00000568515 A8MUU9 505 aa11.65□□□□□ -0.54
DENND4A-208ENST00000568515 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
DENND4A-208ENST00000568515 C9orf92A6NGG3 77 aa11.65□□□□□ -0.54
DENND4A-208ENST00000568515 KRTAP3-1Q9BYR8 98 aa11.64□□□□□ -0.55
DENND4A-208ENST00000568515 SACSQ9NZJ4 4579 aa11.62□□□□□ -0.55
DENND4A-208ENST00000568515 A0A1B0GU33 70 aa11.59□□□□□ -0.55
DENND4A-208ENST00000568515 PKHD1P08F94 4074 aa11.54□□□□□ -0.56
DENND4A-208ENST00000568515 H1FX-AS1Q4G0G2 97 aa11.53□□□□□ -0.56
DENND4A-208ENST00000568515 SMR3BP02814 79 aaPredicted RBP11.51□□□□□ -0.57
DENND4A-208ENST00000568515 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
DENND4A-208ENST00000568515 KRTAP25-1Q3LHN0 102 aa11.39□□□□□ -0.59
DENND4A-208ENST00000568515 COX6B2Q6YFQ2 88 aa11.39□□□□□ -0.59
DENND4A-208ENST00000568515 DYNC1H1Q14204 4646 aaKnown RBP11.36□□□□□ -0.59
DENND4A-208ENST00000568515 KRTAP10-4P60372 401 aaPredicted RBP11.35□□□□□ -0.59
DENND4A-208ENST00000568515 APOBP04114 4563 aaKnown RBP11.33□□□□□ -0.6
DENND4A-208ENST00000568515 FAT1Q14517 4588 aa11.31□□□□□ -0.6
DENND4A-208ENST00000568515 K7ERS5 55 aa11.28□□□□□ -0.6
DENND4A-208ENST00000568515 FLG2Q5D862 2391 aaPredicted RBP11.21□□□□□ -0.62
DENND4A-208ENST00000568515 A0A1B0GVY2 172 aa11.2□□□□□ -0.62
DENND4A-208ENST00000568515 CRIPTQ9P021 101 aa11.15□□□□□ -0.62
DENND4A-208ENST00000568515 KRTAP10-6P60371 365 aaPredicted RBP11.13□□□□□ -0.63
DENND4A-208ENST00000568515 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
DENND4A-208ENST00000568515 ROMO1P60602 79 aa11.11□□□□□ -0.63
DENND4A-208ENST00000568515 H3BS24 57 aa11.1□□□□□ -0.63
DENND4A-208ENST00000568515 RPL37P61927 97 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms