RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SRRM2Q9UQ35 2752 aaKnown RBP2.03□□□□□ -2.08
ATXN3-248ENST00000558190 CELSR3Q9NYQ7 3312 aa2.03□□□□□ -2.08
ATXN3-248ENST00000558190 COL6A3P12111 3177 aa2.03□□□□□ -2.08
ATXN3-248ENST00000558190 KRTAP1-5Q9BYS1 174 aa2.03□□□□□ -2.08
ATXN3-248ENST00000558190 KRTAP1-3Q8IUG1 177 aa2.03□□□□□ -2.09
ATXN3-248ENST00000558190 WDFY4Q6ZS81 3184 aa2.03□□□□□ -2.09
ATXN3-248ENST00000558190 P0C880 135 aa2.02□□□□□ -2.09
ATXN3-248ENST00000558190 XIRP2A4UGR9 3374 aa2.02□□□□□ -2.09
ATXN3-248ENST00000558190 NBPF19A0A087WUL8 3843 aa2.02□□□□□ -2.09
ATXN3-248ENST00000558190 KRTAP1-1Q07627 177 aa2.02□□□□□ -2.09
ATXN3-248ENST00000558190 CMYA5Q8N3K9 4069 aa2.02□□□□□ -2.09
ATXN3-248ENST00000558190 KALRNO60229 2985 aa2.02□□□□□ -2.09
ATXN3-248ENST00000558190 FRYLO94915 3013 aa2.01□□□□□ -2.09
ATXN3-248ENST00000558190 KRTAP10-2P60368 255 aa2.01□□□□□ -2.09
ATXN3-248ENST00000558190 NF1P21359 2839 aa2.01□□□□□ -2.09
ATXN3-248ENST00000558190 H0YAA0 97 aa2□□□□□ -2.09
ATXN3-248ENST00000558190 ZANQ9Y493 2812 aa1.99□□□□□ -2.09
ATXN3-248ENST00000558190 TENM1Q9UKZ4 2725 aa1.99□□□□□ -2.09
ATXN3-248ENST00000558190 LAMA5O15230 3695 aa1.99□□□□□ -2.09
ATXN3-248ENST00000558190 TNP1P09430 55 aa1.99□□□□□ -2.09
ATXN3-248ENST00000558190 ADGRG4Q8IZF6 3080 aa1.98□□□□□ -2.09
ATXN3-248ENST00000558190 DMXL2Q8TDJ6 3036 aa1.98□□□□□ -2.09
ATXN3-248ENST00000558190 CDH23Q9H251 3354 aa1.98□□□□□ -2.09
ATXN3-248ENST00000558190 DMXL1Q9Y485 3027 aa1.98□□□□□ -2.09
ATXN3-248ENST00000558190 ATMQ13315 3056 aa1.98□□□□□ -2.09
ATXN3-248ENST00000558190 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
ATXN3-248ENST00000558190 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
ATXN3-248ENST00000558190 ASH1LQ9NR48 2969 aaKnown RBP1.97□□□□□ -2.09
ATXN3-248ENST00000558190 TRRAPQ9Y4A5 3859 aa1.97□□□□□ -2.09
ATXN3-248ENST00000558190 APCP25054 2843 aa1.97□□□□□ -2.09
ATXN3-248ENST00000558190 KRTAP13-1Q8IUC0 172 aa1.97□□□□□ -2.09
ATXN3-248ENST00000558190 ZFHX4Q86UP3 3567 aa1.97□□□□□ -2.09
ATXN3-248ENST00000558190 DNAH14Q0VDD8 3507 aa1.96□□□□□ -2.1
ATXN3-248ENST00000558190 KRTAP15-1Q3LI76 137 aa1.95□□□□□ -2.1
ATXN3-248ENST00000558190 HUWE1Q7Z6Z7 4374 aaKnown RBP1.95□□□□□ -2.1
ATXN3-248ENST00000558190 DMDP11532 3685 aa1.95□□□□□ -2.1
ATXN3-248ENST00000558190 ASPMQ8IZT6 3477 aa1.94□□□□□ -2.1
ATXN3-248ENST00000558190 EYSQ5T1H1 3165 aa1.94□□□□□ -2.1
ATXN3-248ENST00000558190 SPENQ96T58 3664 aaKnown RBP1.93□□□□□ -2.1
ATXN3-248ENST00000558190 TACC2O95359 2948 aa1.93□□□□□ -2.1
ATXN3-248ENST00000558190 DNAH7Q8WXX0 4024 aa1.93□□□□□ -2.1
ATXN3-248ENST00000558190 DCHS1Q96JQ0 3298 aa1.93□□□□□ -2.1
ATXN3-248ENST00000558190 VCANP13611 3396 aa1.92□□□□□ -2.1
ATXN3-248ENST00000558190 KRTAP3-1Q9BYR8 98 aa1.92□□□□□ -2.1
ATXN3-248ENST00000558190 BSNQ9UPA5 3926 aa1.92□□□□□ -2.1
ATXN3-248ENST00000558190 LAMA3Q16787 3333 aa1.92□□□□□ -2.1
ATXN3-248ENST00000558190 LRBAP50851 2863 aa1.92□□□□□ -2.1
ATXN3-248ENST00000558190 LOC400499M0QZD8 3231 aa1.92□□□□□ -2.1
ATXN3-248ENST00000558190 DNAH6Q9C0G6 4158 aa1.91□□□□□ -2.1
ATXN3-248ENST00000558190 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
ATXN3-248ENST00000558190 TENM2Q9NT68 2774 aa1.9□□□□□ -2.11
ATXN3-248ENST00000558190 DCHS2Q6V1P9 2916 aa1.89□□□□□ -2.11
ATXN3-248ENST00000558190 KRTAP21-3Q3LHN1 58 aa1.89□□□□□ -2.11
ATXN3-248ENST00000558190 ZZEF1O43149 2961 aa1.88□□□□□ -2.11
ATXN3-248ENST00000558190 WDFY3Q8IZQ1 3526 aa1.88□□□□□ -2.11
ATXN3-248ENST00000558190 ZFHX3Q15911 3703 aa1.88□□□□□ -2.11
ATXN3-248ENST00000558190 KRTAP12-2P59991 146 aa1.88□□□□□ -2.11
ATXN3-248ENST00000558190 SPEGQ15772 3267 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 RELNP78509 3460 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 DNAH3Q8TD57 4116 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 KRTAP13-3Q3SY46 172 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 FBN3Q75N90 2809 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 A0A1B0GVY2 172 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 HECTD4Q9Y4D8 3996 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 LYSTQ99698 3801 aa1.87□□□□□ -2.11
ATXN3-248ENST00000558190 PRKDCP78527 4128 aaKnown RBP1.86□□□□□ -2.11
ATXN3-248ENST00000558190 ALMS1Q8TCU4 4167 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 VWFP04275 2813 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 SZT2Q5T011 3432 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 VPS13CQ709C8 3753 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 DNAH11Q96DT5 4516 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 RPS29P62273 56 aaKnown RBP1.86□□□□□ -2.11
ATXN3-248ENST00000558190 COL12A1Q99715 3063 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 PKD1L1Q8TDX9 2849 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 DNAH1Q9P2D7 4330 aa1.86□□□□□ -2.11
ATXN3-248ENST00000558190 MUC3AQ02505 3323 aa1.85□□□□□ -2.11
ATXN3-248ENST00000558190 ANK2Q01484 3957 aa1.84□□□□□ -2.11
ATXN3-248ENST00000558190 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
ATXN3-248ENST00000558190 KRTAP10-6P60371 365 aaPredicted RBP1.84□□□□□ -2.11
ATXN3-248ENST00000558190 SMG1Q96Q15 3661 aaKnown RBP1.84□□□□□ -2.11
ATXN3-248ENST00000558190 TGP01266 2768 aa1.83□□□□□ -2.12
ATXN3-248ENST00000558190 CELSR1Q9NYQ6 3014 aa1.82□□□□□ -2.12
ATXN3-248ENST00000558190 KRTAP3-2Q9BYR7 98 aa1.82□□□□□ -2.12
ATXN3-248ENST00000558190 KRTAP1-4P0C5Y4 121 aa1.82□□□□□ -2.12
ATXN3-248ENST00000558190 Q5VSD8 79 aa1.81□□□□□ -2.12
ATXN3-248ENST00000558190 CSMD1Q96PZ7 3565 aa1.8□□□□□ -2.12
ATXN3-248ENST00000558190 KRTAP13-4Q3LI77 160 aa1.8□□□□□ -2.12
ATXN3-248ENST00000558190 PLECQ15149 4684 aaKnown RBP1.8□□□□□ -2.12
ATXN3-248ENST00000558190 FRAS1Q86XX4 4008 aa1.8□□□□□ -2.12
ATXN3-248ENST00000558190 INE1O15225 51 aa1.8□□□□□ -2.12
ATXN3-248ENST00000558190 XP32Q5T750 250 aa1.79□□□□□ -2.12
ATXN3-248ENST00000558190 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
ATXN3-248ENST00000558190 MEGF8Q7Z7M0 2845 aa1.79□□□□□ -2.12
ATXN3-248ENST00000558190 MXRA5Q9NR99 2828 aa1.78□□□□□ -2.12
ATXN3-248ENST00000558190 DNAH2Q9P225 4427 aa1.77□□□□□ -2.13
ATXN3-248ENST00000558190 PRO2289Q9P1D8 64 aa1.77□□□□□ -2.13
ATXN3-248ENST00000558190 ANK3Q12955 4377 aaKnown RBP1.76□□□□□ -2.13
ATXN3-248ENST00000558190 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
ATXN3-248ENST00000558190 FBN2P35556 2912 aa1.76□□□□□ -2.13
ATXN3-248ENST00000558190 KMT2AQ03164 3969 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms