RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.47□□□□□ -1.05
SRP54-202ENST00000546080 PRR26Q8N8Z3 221 aa8.45□□□□□ -1.06
SRP54-202ENST00000546080 NBDYA0A0U1RRE5 68 aa8.44□□□□□ -1.06
SRP54-202ENST00000546080 ANAPC11Q9NYG5 84 aa8.43□□□□□ -1.06
SRP54-202ENST00000546080 Q5W150 140 aa8.42□□□□□ -1.06
SRP54-202ENST00000546080 SPINK6Q6UWN8 80 aa8.41□□□□□ -1.06
SRP54-202ENST00000546080 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
SRP54-202ENST00000546080 ACYP2P14621 99 aa8.41□□□□□ -1.06
SRP54-202ENST00000546080 PSORS1C2Q9UIG4 136 aa8.4□□□□□ -1.06
SRP54-202ENST00000546080 FBN3Q75N90 2809 aa8.39□□□□□ -1.07
SRP54-202ENST00000546080 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
SRP54-202ENST00000546080 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
SRP54-202ENST00000546080 ZNF861PO60384 105 aa8.37□□□□□ -1.07
SRP54-202ENST00000546080 DNAH7Q8WXX0 4024 aa8.36□□□□□ -1.07
SRP54-202ENST00000546080 DYNC2H1Q8NCM8 4307 aaKnown RBP8.34□□□□□ -1.07
SRP54-202ENST00000546080 COL7A1Q02388 2944 aa8.34□□□□□ -1.08
SRP54-202ENST00000546080 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
SRP54-202ENST00000546080 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
SRP54-202ENST00000546080 CIRBP-AS1Q8TBR5 109 aa8.31□□□□□ -1.08
SRP54-202ENST00000546080 ALMS1Q8TCU4 4167 aa8.31□□□□□ -1.08
SRP54-202ENST00000546080 A0A087WTM6 91 aa8.31□□□□□ -1.08
SRP54-202ENST00000546080 LINC00313P59037 77 aa8.3□□□□□ -1.08
SRP54-202ENST00000546080 DNAH8Q96JB1 4490 aa8.3□□□□□ -1.08
SRP54-202ENST00000546080 RTL8CO15255 209 aa8.29□□□□□ -1.08
SRP54-202ENST00000546080 A0A1B0GU69 56 aa8.29□□□□□ -1.08
SRP54-202ENST00000546080 MEGF8Q7Z7M0 2845 aa8.28□□□□□ -1.08
SRP54-202ENST00000546080 FRAS1Q86XX4 4008 aa8.27□□□□□ -1.08
SRP54-202ENST00000546080 NUPR2A6NF83 97 aa8.27□□□□□ -1.09
SRP54-202ENST00000546080 PLECQ15149 4684 aaKnown RBP8.26□□□□□ -1.09
SRP54-202ENST00000546080 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
SRP54-202ENST00000546080 STAB2Q8WWQ8 2551 aa8.26□□□□□ -1.09
SRP54-202ENST00000546080 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
SRP54-202ENST00000546080 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
SRP54-202ENST00000546080 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
SRP54-202ENST00000546080 PRKDCP78527 4128 aaKnown RBP8.22□□□□□ -1.09
SRP54-202ENST00000546080 IGKV2-30P06310 120 aa8.22□□□□□ -1.09
SRP54-202ENST00000546080 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.09
SRP54-202ENST00000546080 SPATA8Q6RVD6 105 aa8.21□□□□□ -1.09
SRP54-202ENST00000546080 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.1
SRP54-202ENST00000546080 HECTD4Q9Y4D8 3996 aa8.2□□□□□ -1.1
SRP54-202ENST00000546080 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
SRP54-202ENST00000546080 MIR22HGQ0VDD5 57 aa8.18□□□□□ -1.1
SRP54-202ENST00000546080 UQCR11O14957 56 aa8.17□□□□□ -1.1
SRP54-202ENST00000546080 VPS13DQ5THJ4 4388 aa8.14□□□□□ -1.11
SRP54-202ENST00000546080 DNAH17Q9UFH2 4485 aa8.13□□□□□ -1.11
SRP54-202ENST00000546080 TGP01266 2768 aa8.12□□□□□ -1.11
SRP54-202ENST00000546080 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
SRP54-202ENST00000546080 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
SRP54-202ENST00000546080 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
SRP54-202ENST00000546080 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
SRP54-202ENST00000546080 STARD9Q9P2P6 4700 aa8.06□□□□□ -1.12
SRP54-202ENST00000546080 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
SRP54-202ENST00000546080 C1orf134Q5TEV5 83 aa8.03□□□□□ -1.12
SRP54-202ENST00000546080 KMT2AQ03164 3969 aa7.99□□□□□ -1.13
SRP54-202ENST00000546080 SPINK1P00995 79 aa7.97□□□□□ -1.13
SRP54-202ENST00000546080 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
SRP54-202ENST00000546080 DNAH11Q96DT5 4516 aa7.95□□□□□ -1.14
SRP54-202ENST00000546080 Q8N1X5 172 aa7.92□□□□□ -1.14
SRP54-202ENST00000546080 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
SRP54-202ENST00000546080 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
SRP54-202ENST00000546080 KRTAP1-4P0C5Y4 121 aa7.89□□□□□ -1.15
SRP54-202ENST00000546080 DNAH6Q9C0G6 4158 aa7.89□□□□□ -1.15
SRP54-202ENST00000546080 LY6G6CO95867 125 aa7.88□□□□□ -1.15
SRP54-202ENST00000546080 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
SRP54-202ENST00000546080 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
SRP54-202ENST00000546080 Q6ZSA8 131 aa7.83□□□□□ -1.16
SRP54-202ENST00000546080 H0YAA0 97 aa7.81□□□□□ -1.16
SRP54-202ENST00000546080 KRTAP10-1P60331 282 aa7.81□□□□□ -1.16
SRP54-202ENST00000546080 A8MUU9 505 aa7.8□□□□□ -1.16
SRP54-202ENST00000546080 LRP1BQ9NZR2 4599 aa7.79□□□□□ -1.16
SRP54-202ENST00000546080 A0A1B0GU33 70 aa7.75□□□□□ -1.17
SRP54-202ENST00000546080 H3BS24 57 aa7.74□□□□□ -1.17
SRP54-202ENST00000546080 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
SRP54-202ENST00000546080 KRTAP25-1Q3LHN0 102 aa7.72□□□□□ -1.17
SRP54-202ENST00000546080 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
SRP54-202ENST00000546080 PKD1P98161 4303 aa7.7□□□□□ -1.18
SRP54-202ENST00000546080 VPS13BQ7Z7G8 4022 aa7.69□□□□□ -1.18
SRP54-202ENST00000546080 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
SRP54-202ENST00000546080 KRTAP3-1Q9BYR8 98 aa7.67□□□□□ -1.18
SRP54-202ENST00000546080 C9orf92A6NGG3 77 aa7.66□□□□□ -1.18
SRP54-202ENST00000546080 KMT2CQ8NEZ4 4911 aaKnown RBP7.66□□□□□ -1.18
SRP54-202ENST00000546080 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
SRP54-202ENST00000546080 HYDINQ4G0P3 5121 aa7.64□□□□□ -1.19
SRP54-202ENST00000546080 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
SRP54-202ENST00000546080 K7ERS5 55 aa7.61□□□□□ -1.19
SRP54-202ENST00000546080 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
SRP54-202ENST00000546080 ROMO1P60602 79 aa7.58□□□□□ -1.2
SRP54-202ENST00000546080 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
SRP54-202ENST00000546080 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
SRP54-202ENST00000546080 RYR2Q92736 4967 aa7.51□□□□□ -1.21
SRP54-202ENST00000546080 RYR3Q15413 4870 aa7.5□□□□□ -1.21
SRP54-202ENST00000546080 SMR3BP02814 79 aaPredicted RBP7.45□□□□□ -1.22
SRP54-202ENST00000546080 PKHD1L1Q86WI1 4243 aa7.42□□□□□ -1.22
SRP54-202ENST00000546080 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
SRP54-202ENST00000546080 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
SRP54-202ENST00000546080 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
SRP54-202ENST00000546080 PKHD1P08F94 4074 aa7.36□□□□□ -1.23
SRP54-202ENST00000546080 A0A0D9SG42 100 aa7.35□□□□□ -1.23
SRP54-202ENST00000546080 P0C880 135 aa7.35□□□□□ -1.23
SRP54-202ENST00000546080 KRTAP13-4Q3LI77 160 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms