RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 RELNP78509 3460 aa5.01□□□□□ -1.61
CTNND1-225ENST00000530094 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
CTNND1-225ENST00000530094 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
CTNND1-225ENST00000530094 M0QZ58 72 aa4.98□□□□□ -1.61
CTNND1-225ENST00000530094 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
CTNND1-225ENST00000530094 DCHS1Q96JQ0 3298 aa4.98□□□□□ -1.61
CTNND1-225ENST00000530094 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
CTNND1-225ENST00000530094 ROMO1P60602 79 aa4.97□□□□□ -1.61
CTNND1-225ENST00000530094 NF1P21359 2839 aa4.97□□□□□ -1.61
CTNND1-225ENST00000530094 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
CTNND1-225ENST00000530094 FBN2P35556 2912 aa4.96□□□□□ -1.62
CTNND1-225ENST00000530094 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.62
CTNND1-225ENST00000530094 Q5VV11 94 aa4.95□□□□□ -1.62
CTNND1-225ENST00000530094 LAMA5O15230 3695 aa4.95□□□□□ -1.62
CTNND1-225ENST00000530094 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
CTNND1-225ENST00000530094 DMBT1Q9UGM3 2413 aaPredicted RBP4.94□□□□□ -1.62
CTNND1-225ENST00000530094 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
CTNND1-225ENST00000530094 DMDP11532 3685 aa4.92□□□□□ -1.62
CTNND1-225ENST00000530094 ASPMQ8IZT6 3477 aa4.91□□□□□ -1.62
CTNND1-225ENST00000530094 H3BS24 57 aa4.91□□□□□ -1.62
CTNND1-225ENST00000530094 Q5XG85 94 aa4.91□□□□□ -1.62
CTNND1-225ENST00000530094 MXRA5Q9NR99 2828 aa4.9□□□□□ -1.63
CTNND1-225ENST00000530094 WDFY3Q8IZQ1 3526 aa4.9□□□□□ -1.63
CTNND1-225ENST00000530094 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
CTNND1-225ENST00000530094 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
CTNND1-225ENST00000530094 A0A087X002 238 aa4.87□□□□□ -1.63
CTNND1-225ENST00000530094 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
CTNND1-225ENST00000530094 FLG2Q5D862 2391 aaPredicted RBP4.85□□□□□ -1.63
CTNND1-225ENST00000530094 PDZD2O15018 2839 aa4.85□□□□□ -1.63
CTNND1-225ENST00000530094 NBPF19A0A087WUL8 3843 aa4.84□□□□□ -1.63
CTNND1-225ENST00000530094 CYSTM1Q9H1C7 97 aa4.82□□□□□ -1.64
CTNND1-225ENST00000530094 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
CTNND1-225ENST00000530094 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
CTNND1-225ENST00000530094 TENM1Q9UKZ4 2725 aa4.79□□□□□ -1.64
CTNND1-225ENST00000530094 CELSR1Q9NYQ6 3014 aa4.79□□□□□ -1.64
CTNND1-225ENST00000530094 SPATA8Q6RVD6 105 aa4.79□□□□□ -1.64
CTNND1-225ENST00000530094 A8MUU9 505 aa4.78□□□□□ -1.64
CTNND1-225ENST00000530094 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.64
CTNND1-225ENST00000530094 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
CTNND1-225ENST00000530094 ZFHX4Q86UP3 3567 aa4.77□□□□□ -1.65
CTNND1-225ENST00000530094 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
CTNND1-225ENST00000530094 ZFHX3Q15911 3703 aa4.75□□□□□ -1.65
CTNND1-225ENST00000530094 TENM3Q9P273 2699 aa4.75□□□□□ -1.65
CTNND1-225ENST00000530094 PKD1L1Q8TDX9 2849 aa4.75□□□□□ -1.65
CTNND1-225ENST00000530094 SMG1Q96Q15 3661 aaKnown RBP4.75□□□□□ -1.65
CTNND1-225ENST00000530094 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
CTNND1-225ENST00000530094 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
CTNND1-225ENST00000530094 TNP1P09430 55 aa4.67□□□□□ -1.66
CTNND1-225ENST00000530094 FBN1P35555 2871 aaKnown RBP4.67□□□□□ -1.66
CTNND1-225ENST00000530094 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
CTNND1-225ENST00000530094 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.67
CTNND1-225ENST00000530094 CSMD1Q96PZ7 3565 aa4.63□□□□□ -1.67
CTNND1-225ENST00000530094 VWFP04275 2813 aa4.62□□□□□ -1.67
CTNND1-225ENST00000530094 CSMD2Q7Z408 3487 aa4.62□□□□□ -1.67
CTNND1-225ENST00000530094 A8MU10 97 aa4.61□□□□□ -1.67
CTNND1-225ENST00000530094 A6NN06 94 aa4.6□□□□□ -1.67
CTNND1-225ENST00000530094 TGP01266 2768 aa4.59□□□□□ -1.67
CTNND1-225ENST00000530094 ANK3Q12955 4377 aaKnown RBP4.59□□□□□ -1.68
CTNND1-225ENST00000530094 PP632Q6XCG6 107 aa4.59□□□□□ -1.68
CTNND1-225ENST00000530094 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
CTNND1-225ENST00000530094 SPENQ96T58 3664 aaKnown RBP4.56□□□□□ -1.68
CTNND1-225ENST00000530094 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
CTNND1-225ENST00000530094 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
CTNND1-225ENST00000530094 XP32Q5T750 250 aa4.55□□□□□ -1.68
CTNND1-225ENST00000530094 BSNQ9UPA5 3926 aa4.51□□□□□ -1.69
CTNND1-225ENST00000530094 SVEP1Q4LDE5 3571 aa4.5□□□□□ -1.69
CTNND1-225ENST00000530094 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
CTNND1-225ENST00000530094 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
CTNND1-225ENST00000530094 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
CTNND1-225ENST00000530094 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
CTNND1-225ENST00000530094 TRRAPQ9Y4A5 3859 aa4.44□□□□□ -1.7
CTNND1-225ENST00000530094 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
CTNND1-225ENST00000530094 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.71
CTNND1-225ENST00000530094 CUBNO60494 3623 aa4.4□□□□□ -1.71
CTNND1-225ENST00000530094 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
CTNND1-225ENST00000530094 FBN3Q75N90 2809 aa4.38□□□□□ -1.71
CTNND1-225ENST00000530094 H0YAA0 97 aa4.32□□□□□ -1.72
CTNND1-225ENST00000530094 P0C880 135 aa4.31□□□□□ -1.72
CTNND1-225ENST00000530094 COL7A1Q02388 2944 aa4.31□□□□□ -1.72
CTNND1-225ENST00000530094 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
CTNND1-225ENST00000530094 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
CTNND1-225ENST00000530094 ZNF469Q96JG9 3925 aaPredicted RBP4.22□□□□□ -1.73
CTNND1-225ENST00000530094 AKAP9Q99996 3911 aa4.21□□□□□ -1.74
CTNND1-225ENST00000530094 KRTAP4-5Q9BYR2 181 aa4.2□□□□□ -1.74
CTNND1-225ENST00000530094 VPS13CQ709C8 3753 aa4.2□□□□□ -1.74
CTNND1-225ENST00000530094 MT1HL1P0DM35 61 aa4.14□□□□□ -1.75
CTNND1-225ENST00000530094 KRTAP13-4Q3LI77 160 aa4.14□□□□□ -1.75
CTNND1-225ENST00000530094 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
CTNND1-225ENST00000530094 DNAH9Q9NYC9 4486 aa4.11□□□□□ -1.75
CTNND1-225ENST00000530094 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
CTNND1-225ENST00000530094 ALMS1Q8TCU4 4167 aa4.07□□□□□ -1.76
CTNND1-225ENST00000530094 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
CTNND1-225ENST00000530094 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
CTNND1-225ENST00000530094 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
CTNND1-225ENST00000530094 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
CTNND1-225ENST00000530094 CSMD3Q7Z407 3707 aa3.94□□□□□ -1.78
CTNND1-225ENST00000530094 PLECQ15149 4684 aaKnown RBP3.93□□□□□ -1.78
CTNND1-225ENST00000530094 DNAH5Q8TE73 4624 aa3.93□□□□□ -1.78
CTNND1-225ENST00000530094 DNAH1Q9P2D7 4330 aa3.89□□□□□ -1.79
CTNND1-225ENST00000530094 PRKDCP78527 4128 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms