RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 USP9YO00507 2555 aaPredicted RBP0.1□□□□□ -2.39
COPB1-203ENST00000525214 AKAP9Q99996 3911 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 NBEAL2Q6ZNJ1 2754 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 VPS13BQ7Z7G8 4022 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 NBPF19A0A087WUL8 3843 aa0.09□□□□□ -2.4
COPB1-203ENST00000525214 SPTAN1Q13813 2472 aaKnown RBP0.09□□□□□ -2.4
COPB1-203ENST00000525214 ANKRD11Q6UB99 2663 aaPredicted RBP0.09□□□□□ -2.4
COPB1-203ENST00000525214 ABCC6O95255 1503 aa0.08□□□□□ -2.4
COPB1-203ENST00000525214 ACACBO00763 2458 aa0.08□□□□□ -2.4
COPB1-203ENST00000525214 SVEP1Q4LDE5 3571 aa0.08□□□□□ -2.4
COPB1-203ENST00000525214 CCDC180Q9P1Z9 1646 aa0.08□□□□□ -2.4
COPB1-203ENST00000525214 RNF213Q63HN8 5207 aa0.08□□□□□ -2.4
COPB1-203ENST00000525214 RYR2Q92736 4967 aa0.08□□□□□ -2.4
COPB1-203ENST00000525214 C3P01024 1663 aa0.08□□□□□ -2.4
COPB1-203ENST00000525214 TACC2O95359 2948 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 CUBNO60494 3623 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 SFTA3P0C7M3 94 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 FCER1GP30273 86 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 MINOS1Q5TGZ0 78 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 NBEAQ8NFP9 2946 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 ERICH3Q5RHP9 1530 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 MYO9AB2RTY4 2548 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 HTTP42858 3142 aa0.07□□□□□ -2.4
COPB1-203ENST00000525214 ABCA6Q8N139 1617 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 CFAP46Q8IYW2 2715 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 K7EMI3 77 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 NCBP2-AS2Q69YL0 99 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 SMIM5Q71RC9 77 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 ITPR1Q14643 2758 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 NIPBLQ6KC79 2804 aaeCLIP0.06□□□□□ -2.4
COPB1-203ENST00000525214 ITPR2Q14571 2701 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 KALRNO60229 2985 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 TLN2Q9Y4G6 2542 aa0.06□□□□□ -2.4
COPB1-203ENST00000525214 WDR87Q6ZQQ6 2873 aa0.05□□□□□ -2.4
COPB1-203ENST00000525214 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
COPB1-203ENST00000525214 M0R1W7 72 aa0.05□□□□□ -2.4
COPB1-203ENST00000525214 PRLHP81277 87 aa0.05□□□□□ -2.4
COPB1-203ENST00000525214 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
COPB1-203ENST00000525214 LRBAP50851 2863 aa0.05□□□□□ -2.4
COPB1-203ENST00000525214 CEP250Q9BV73 2442 aa0.05□□□□□ -2.4
COPB1-203ENST00000525214 WDFY4Q6ZS81 3184 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 CEP295Q9C0D2 2601 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 ANKRD36CQ5JPF3 1778 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 RYR1P21817 5038 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 GLI2P10070 1586 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 TLN1Q9Y490 2541 aaKnown RBP0.04□□□□□ -2.4
COPB1-203ENST00000525214 RPS27P42677 84 aaKnown RBP0.04□□□□□ -2.4
COPB1-203ENST00000525214 SERF2P84101 59 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 WT1-ASQ06250 92 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 RPS27LQ71UM5 84 aaKnown RBP0.04□□□□□ -2.4
COPB1-203ENST00000525214 DEFB106AQ8N104 65 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 NMES1Q9C002 83 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 C6orf48Q9UBA6 75 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 S4R3F8 94 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 HERC1Q15751 4861 aa0.04□□□□□ -2.4
COPB1-203ENST00000525214 LAMA2P24043 3122 aaKnown RBP0.03□□□□□ -2.4
COPB1-203ENST00000525214 LAMA3Q16787 3333 aa0.03□□□□□ -2.4
COPB1-203ENST00000525214 C9orf92A6NGG3 77 aa0.03□□□□□ -2.4
COPB1-203ENST00000525214 SPRR2AP35326 72 aa0.03□□□□□ -2.4
COPB1-203ENST00000525214 FRYQ5TBA9 3013 aa0.03□□□□□ -2.41
COPB1-203ENST00000525214 ITSN2Q9NZM3 1697 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 FAT3Q8TDW7 4589 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 DMXL2Q8TDJ6 3036 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 BOD1L1Q8NFC6 3051 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 HYDINQ4G0P3 5121 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 CELSR3Q9NYQ7 3312 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 TEX15Q9BXT5 2789 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 VPS13DQ5THJ4 4388 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 TIAM1Q13009 1591 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 ABCA13Q86UQ4 5058 aa0.02□□□□□ -2.41
COPB1-203ENST00000525214 LY75O60449 1722 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 DNAH11Q96DT5 4516 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 RYR3Q15413 4870 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 APOBP04114 4563 aaKnown RBP0.01□□□□□ -2.41
COPB1-203ENST00000525214 EPPK1P58107 5090 aaKnown RBP0.01□□□□□ -2.41
COPB1-203ENST00000525214 IGIPA6NJ69 53 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 H3BNG1 76 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 KRTAP6-2Q3LI66 62 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 CPS1P31327 1500 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 KIF1AQ12756 1690 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 ALS2Q96Q42 1657 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 DNAH6Q9C0G6 4158 aa0.01□□□□□ -2.41
COPB1-203ENST00000525214 CROCC2H7BZ55 1655 aa0□□□□□ -2.41
COPB1-203ENST00000525214 ABCA10Q8WWZ4 1543 aa0□□□□□ -2.41
COPB1-203ENST00000525214 ANK3Q12955 4377 aaKnown RBP-0□□□□□ -2.41
COPB1-203ENST00000525214 PKHD1L1Q86WI1 4243 aa-0□□□□□ -2.41
COPB1-203ENST00000525214 CRYBG3Q68DQ2 2970 aa-0□□□□□ -2.41
COPB1-203ENST00000525214 RELNP78509 3460 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 SRCAPQ6ZRS2 3230 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 UGGT1Q9NYU2 1555 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 A0A0C4DFX4 3053 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 EEA1Q15075 1411 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 H3BUA1 57 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-203ENST00000525214 DCHS1Q96JQ0 3298 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 LAMA1P25391 3075 aa-0.01□□□□□ -2.41
COPB1-203ENST00000525214 FREM2Q5SZK8 3169 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms