RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 ZNF861PO60384 105 aa7.12□□□□□ -1.27
CPEB4-207ENST00000519835 A0A087WTM6 91 aa7.11□□□□□ -1.27
CPEB4-207ENST00000519835 A0A087X002 238 aa7.09□□□□□ -1.27
CPEB4-207ENST00000519835 RTL8CO15255 209 aa7.09□□□□□ -1.27
CPEB4-207ENST00000519835 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
CPEB4-207ENST00000519835 A6NN06 94 aa7.08□□□□□ -1.28
CPEB4-207ENST00000519835 KRTAP13-3Q3SY46 172 aa7.07□□□□□ -1.28
CPEB4-207ENST00000519835 C8orf87E5RJ46 101 aa7.06□□□□□ -1.28
CPEB4-207ENST00000519835 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
CPEB4-207ENST00000519835 H3BS24 57 aa7.06□□□□□ -1.28
CPEB4-207ENST00000519835 COL7A1Q02388 2944 aa7.05□□□□□ -1.28
CPEB4-207ENST00000519835 SPINK6Q6UWN8 80 aa7.04□□□□□ -1.28
CPEB4-207ENST00000519835 DNAH7Q8WXX0 4024 aa7.04□□□□□ -1.28
CPEB4-207ENST00000519835 ACYP2P14621 99 aa7.03□□□□□ -1.28
CPEB4-207ENST00000519835 Q5W150 140 aa7.03□□□□□ -1.28
CPEB4-207ENST00000519835 MGAM2Q2M2H8 2515 aa7.02□□□□□ -1.29
CPEB4-207ENST00000519835 SPINK7P58062 85 aa7.02□□□□□ -1.29
CPEB4-207ENST00000519835 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
CPEB4-207ENST00000519835 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
CPEB4-207ENST00000519835 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
CPEB4-207ENST00000519835 CIRBP-AS1Q8TBR5 109 aa7□□□□□ -1.29
CPEB4-207ENST00000519835 CSMD3Q7Z407 3707 aa7□□□□□ -1.29
CPEB4-207ENST00000519835 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
CPEB4-207ENST00000519835 PRR26Q8N8Z3 221 aa6.99□□□□□ -1.29
CPEB4-207ENST00000519835 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
CPEB4-207ENST00000519835 FAM229AH3BQW9 127 aa6.98□□□□□ -1.29
CPEB4-207ENST00000519835 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
CPEB4-207ENST00000519835 LINC00313P59037 77 aa6.94□□□□□ -1.3
CPEB4-207ENST00000519835 VPS13DQ5THJ4 4388 aa6.94□□□□□ -1.3
CPEB4-207ENST00000519835 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
CPEB4-207ENST00000519835 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
CPEB4-207ENST00000519835 DNAH17Q9UFH2 4485 aa6.91□□□□□ -1.3
CPEB4-207ENST00000519835 C1orf134Q5TEV5 83 aa6.91□□□□□ -1.3
CPEB4-207ENST00000519835 ALMS1Q8TCU4 4167 aa6.91□□□□□ -1.3
CPEB4-207ENST00000519835 FRAS1Q86XX4 4008 aa6.89□□□□□ -1.31
CPEB4-207ENST00000519835 A0A1B0GU69 56 aa6.89□□□□□ -1.31
CPEB4-207ENST00000519835 STARD9Q9P2P6 4700 aa6.89□□□□□ -1.31
CPEB4-207ENST00000519835 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
CPEB4-207ENST00000519835 RETNLBQ9BQ08 111 aa6.84□□□□□ -1.31
CPEB4-207ENST00000519835 PRKDCP78527 4128 aaKnown RBP6.84□□□□□ -1.31
CPEB4-207ENST00000519835 KRTAP13-2Q52LG2 175 aa6.83□□□□□ -1.32
CPEB4-207ENST00000519835 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
CPEB4-207ENST00000519835 UQCR11O14957 56 aa6.8□□□□□ -1.32
CPEB4-207ENST00000519835 DNAH2Q9P225 4427 aa6.78□□□□□ -1.32
CPEB4-207ENST00000519835 FBN3Q75N90 2809 aa6.78□□□□□ -1.32
CPEB4-207ENST00000519835 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
CPEB4-207ENST00000519835 IGKV2D-30A0A075B6S6 120 aa6.78□□□□□ -1.32
CPEB4-207ENST00000519835 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
CPEB4-207ENST00000519835 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
CPEB4-207ENST00000519835 LY6G6CO95867 125 aa6.76□□□□□ -1.33
CPEB4-207ENST00000519835 KRTAP10-2P60368 255 aa6.75□□□□□ -1.33
CPEB4-207ENST00000519835 Q6ZSA8 131 aa6.75□□□□□ -1.33
CPEB4-207ENST00000519835 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
CPEB4-207ENST00000519835 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
CPEB4-207ENST00000519835 DNAH11Q96DT5 4516 aa6.71□□□□□ -1.34
CPEB4-207ENST00000519835 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
CPEB4-207ENST00000519835 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
CPEB4-207ENST00000519835 SPINK1P00995 79 aa6.69□□□□□ -1.34
CPEB4-207ENST00000519835 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
CPEB4-207ENST00000519835 DNAH5Q8TE73 4624 aa6.68□□□□□ -1.34
CPEB4-207ENST00000519835 TYMSOSQ8TAI1 123 aa6.67□□□□□ -1.34
CPEB4-207ENST00000519835 TGP01266 2768 aa6.67□□□□□ -1.34
CPEB4-207ENST00000519835 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
CPEB4-207ENST00000519835 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
CPEB4-207ENST00000519835 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
CPEB4-207ENST00000519835 Q8N1X5 172 aa6.61□□□□□ -1.35
CPEB4-207ENST00000519835 LINC00304Q8N9R0 145 aa6.59□□□□□ -1.36
CPEB4-207ENST00000519835 LRP1BQ9NZR2 4599 aa6.55□□□□□ -1.36
CPEB4-207ENST00000519835 PKD1P98161 4303 aa6.53□□□□□ -1.36
CPEB4-207ENST00000519835 CSAG1Q6PB30 78 aa6.52□□□□□ -1.37
CPEB4-207ENST00000519835 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
CPEB4-207ENST00000519835 A8MUU9 505 aa6.51□□□□□ -1.37
CPEB4-207ENST00000519835 VPS13BQ7Z7G8 4022 aa6.5□□□□□ -1.37
CPEB4-207ENST00000519835 H0YAA0 97 aa6.5□□□□□ -1.37
CPEB4-207ENST00000519835 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.37
CPEB4-207ENST00000519835 A0A1B0GU33 70 aa6.46□□□□□ -1.37
CPEB4-207ENST00000519835 C9orf92A6NGG3 77 aa6.45□□□□□ -1.38
CPEB4-207ENST00000519835 H1FX-AS1Q4G0G2 97 aa6.45□□□□□ -1.38
CPEB4-207ENST00000519835 SACSQ9NZJ4 4579 aa6.43□□□□□ -1.38
CPEB4-207ENST00000519835 KRTAP3-1Q9BYR8 98 aa6.43□□□□□ -1.38
CPEB4-207ENST00000519835 HYDINQ4G0P3 5121 aa6.38□□□□□ -1.39
CPEB4-207ENST00000519835 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
CPEB4-207ENST00000519835 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
CPEB4-207ENST00000519835 K7ERS5 55 aa6.36□□□□□ -1.39
CPEB4-207ENST00000519835 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
CPEB4-207ENST00000519835 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
CPEB4-207ENST00000519835 KRTAP10-4P60372 401 aaPredicted RBP6.3□□□□□ -1.4
CPEB4-207ENST00000519835 DNHD1Q96M86 4753 aa6.3□□□□□ -1.4
CPEB4-207ENST00000519835 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
CPEB4-207ENST00000519835 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
CPEB4-207ENST00000519835 PKHD1P08F94 4074 aa6.24□□□□□ -1.41
CPEB4-207ENST00000519835 A0A1B0GVY2 172 aa6.23□□□□□ -1.41
CPEB4-207ENST00000519835 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.41
CPEB4-207ENST00000519835 ROMO1P60602 79 aa6.2□□□□□ -1.42
CPEB4-207ENST00000519835 FLG2Q5D862 2391 aaPredicted RBP6.19□□□□□ -1.42
CPEB4-207ENST00000519835 RPL37P61927 97 aaKnown RBP6.19□□□□□ -1.42
CPEB4-207ENST00000519835 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
CPEB4-207ENST00000519835 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
CPEB4-207ENST00000519835 S4R3F8 94 aa6.14□□□□□ -1.43
CPEB4-207ENST00000519835 FAT1Q14517 4588 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms