RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 HIVEP1P15822 2718 aa0.14□□□□□ -2.39
DHFR-204ENST00000508282 MXRA5Q9NR99 2828 aa0.14□□□□□ -2.39
DHFR-204ENST00000508282 SONP18583 2426 aaKnown RBP0.13□□□□□ -2.39
DHFR-204ENST00000508282 PRLHP81277 87 aa0.13□□□□□ -2.39
DHFR-204ENST00000508282 TENM2Q9NT68 2774 aa0.13□□□□□ -2.39
DHFR-204ENST00000508282 ZFHX4Q86UP3 3567 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 KALRNO60229 2985 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 SRCAPQ6ZRS2 3230 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 ALS2Q96Q42 1657 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 FCER1GP30273 86 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 SERF2P84101 59 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 PRRC2CQ9Y520 2896 aaKnown RBP0.12□□□□□ -2.39
DHFR-204ENST00000508282 EPG5Q9HCE0 2579 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 EP400Q96L91 3159 aa0.12□□□□□ -2.39
DHFR-204ENST00000508282 ITPR1Q14643 2758 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 ANKRD11Q6UB99 2663 aaPredicted RBP0.11□□□□□ -2.39
DHFR-204ENST00000508282 LAMA2P24043 3122 aaKnown RBP0.11□□□□□ -2.39
DHFR-204ENST00000508282 DEFB106AQ8N104 65 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 NMES1Q9C002 83 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 C6orf48Q9UBA6 75 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 DOPEY1Q5JWR5 2465 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 PCNTO95613 3336 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 CSMD1Q96PZ7 3565 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 CROCC2H7BZ55 1655 aa0.11□□□□□ -2.39
DHFR-204ENST00000508282 CEP290O15078 2479 aa0.1□□□□□ -2.39
DHFR-204ENST00000508282 RIF1Q5UIP0 2472 aaKnown RBP0.1□□□□□ -2.39
DHFR-204ENST00000508282 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
DHFR-204ENST00000508282 USH2AO75445 5202 aa0.1□□□□□ -2.39
DHFR-204ENST00000508282 M0R1W7 72 aa0.1□□□□□ -2.39
DHFR-204ENST00000508282 LRP2P98164 4655 aa0.1□□□□□ -2.39
DHFR-204ENST00000508282 A0A0C4DFX4 3053 aa0.1□□□□□ -2.39
DHFR-204ENST00000508282 NBEAQ8NFP9 2946 aa0.09□□□□□ -2.39
DHFR-204ENST00000508282 RPS27P42677 84 aaKnown RBP0.09□□□□□ -2.4
DHFR-204ENST00000508282 WT1-ASQ06250 92 aa0.09□□□□□ -2.4
DHFR-204ENST00000508282 RPS27LQ71UM5 84 aaKnown RBP0.09□□□□□ -2.4
DHFR-204ENST00000508282 S4R3F8 94 aa0.09□□□□□ -2.4
DHFR-204ENST00000508282 CDC42BPAQ5VT25 1732 aa0.09□□□□□ -2.4
DHFR-204ENST00000508282 UNC80Q8N2C7 3258 aa0.09□□□□□ -2.4
DHFR-204ENST00000508282 MYO9AB2RTY4 2548 aa0.08□□□□□ -2.4
DHFR-204ENST00000508282 DNHD1Q96M86 4753 aa0.08□□□□□ -2.4
DHFR-204ENST00000508282 CCDC168Q8NDH2 2452 aa0.08□□□□□ -2.4
DHFR-204ENST00000508282 HERC2O95714 4834 aa0.08□□□□□ -2.4
DHFR-204ENST00000508282 CPS1P31327 1500 aa0.08□□□□□ -2.4
DHFR-204ENST00000508282 CLASP1Q7Z460 1538 aa0.08□□□□□ -2.4
DHFR-204ENST00000508282 UGGT1Q9NYU2 1555 aa0.07□□□□□ -2.4
DHFR-204ENST00000508282 LRP1BQ9NZR2 4599 aa0.07□□□□□ -2.4
DHFR-204ENST00000508282 RELNP78509 3460 aa0.07□□□□□ -2.4
DHFR-204ENST00000508282 CEP350Q5VT06 3117 aa0.07□□□□□ -2.4
DHFR-204ENST00000508282 PRXQ9BXM0 1461 aa0.07□□□□□ -2.4
DHFR-204ENST00000508282 PKHD1P08F94 4074 aa0.07□□□□□ -2.4
DHFR-204ENST00000508282 TOGARAM1Q9Y4F4 1720 aa0.06□□□□□ -2.4
DHFR-204ENST00000508282 FASNP49327 2511 aaKnown RBP0.06□□□□□ -2.4
DHFR-204ENST00000508282 TGP01266 2768 aa0.06□□□□□ -2.4
DHFR-204ENST00000508282 NF1P21359 2839 aa0.05□□□□□ -2.4
DHFR-204ENST00000508282 SPEGQ15772 3267 aa0.05□□□□□ -2.4
DHFR-204ENST00000508282 UTP20O75691 2785 aaKnown RBP0.05□□□□□ -2.4
DHFR-204ENST00000508282 PKD1P98161 4303 aa0.05□□□□□ -2.4
DHFR-204ENST00000508282 C9orf92A6NGG3 77 aa0.05□□□□□ -2.4
DHFR-204ENST00000508282 H3BNG1 76 aa0.05□□□□□ -2.4
DHFR-204ENST00000508282 WDR87Q6ZQQ6 2873 aa0.05□□□□□ -2.4
DHFR-204ENST00000508282 MAST1Q9Y2H9 1570 aa0.05□□□□□ -2.4
DHFR-204ENST00000508282 GCN1Q92616 2671 aaKnown RBP0.05□□□□□ -2.4
DHFR-204ENST00000508282 MAP1AP78559 2803 aaPredicted RBP0.05□□□□□ -2.4
DHFR-204ENST00000508282 VPS13BQ7Z7G8 4022 aa0.04□□□□□ -2.4
DHFR-204ENST00000508282 MKI67P46013 3256 aaKnown RBP0.04□□□□□ -2.4
DHFR-204ENST00000508282 DCHS1Q96JQ0 3298 aa0.04□□□□□ -2.4
DHFR-204ENST00000508282 SPRR2AP35326 72 aa0.04□□□□□ -2.4
DHFR-204ENST00000508282 KRTAP6-2Q3LI66 62 aa0.04□□□□□ -2.4
DHFR-204ENST00000508282 SPG11Q96JI7 2443 aa0.04□□□□□ -2.4
DHFR-204ENST00000508282 EEA1Q15075 1411 aa0.04□□□□□ -2.4
DHFR-204ENST00000508282 CFAP47Q6ZTR5 3102 aa0.03□□□□□ -2.4
DHFR-204ENST00000508282 H3BUA1 57 aa0.03□□□□□ -2.4
DHFR-204ENST00000508282 TIMM8BQ9Y5J9 83 aaPredicted RBP0.03□□□□□ -2.4
DHFR-204ENST00000508282 EYSQ5T1H1 3165 aa0.03□□□□□ -2.4
DHFR-204ENST00000508282 MGAM2Q2M2H8 2515 aa0.02□□□□□ -2.41
DHFR-204ENST00000508282 VCANP13611 3396 aa0.02□□□□□ -2.41
DHFR-204ENST00000508282 NBEAL1Q6ZS30 2694 aa0.01□□□□□ -2.41
DHFR-204ENST00000508282 ZZEF1O43149 2961 aa0.01□□□□□ -2.41
DHFR-204ENST00000508282 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
DHFR-204ENST00000508282 IGIPA6NJ69 53 aa0.01□□□□□ -2.41
DHFR-204ENST00000508282 LINC00308Q8TCZ7 52 aa0.01□□□□□ -2.41
DHFR-204ENST00000508282 FLGP20930 4061 aaPredicted RBP0.01□□□□□ -2.41
DHFR-204ENST00000508282 DNAH12Q6ZR08 3092 aa0□□□□□ -2.41
DHFR-204ENST00000508282 SVEP1Q4LDE5 3571 aa0□□□□□ -2.41
DHFR-204ENST00000508282 USP9YO00507 2555 aaPredicted RBP0□□□□□ -2.41
DHFR-204ENST00000508282 TFF3Q07654 80 aa0□□□□□ -2.41
DHFR-204ENST00000508282 TMEM167BQ9NRX6 74 aa0□□□□□ -2.41
DHFR-204ENST00000508282 KAAG1Q9UBP8 84 aa0□□□□□ -2.41
DHFR-204ENST00000508282 CFAP46Q8IYW2 2715 aa-0□□□□□ -2.41
DHFR-204ENST00000508282 LRRK2Q5S007 2527 aa-0.01□□□□□ -2.41
DHFR-204ENST00000508282 ACACBO00763 2458 aa-0.01□□□□□ -2.41
DHFR-204ENST00000508282 A0A1B0GUL6 1792 aa-0.01□□□□□ -2.41
DHFR-204ENST00000508282 MROH2AA6NES4 1674 aa-0.01□□□□□ -2.41
DHFR-204ENST00000508282 MUC3AQ02505 3323 aa-0.01□□□□□ -2.41
DHFR-204ENST00000508282 LAMA1P25391 3075 aa-0.01□□□□□ -2.41
DHFR-204ENST00000508282 SZT2Q5T011 3432 aa-0.02□□□□□ -2.41
DHFR-204ENST00000508282 DEFB110Q30KQ9 67 aa-0.02□□□□□ -2.41
DHFR-204ENST00000508282 WFDC10BQ8IUB3 73 aa-0.02□□□□□ -2.41
DHFR-204ENST00000508282 MTORP42345 2549 aa-0.02□□□□□ -2.41
DHFR-204ENST00000508282 LAMA5O15230 3695 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms