RNA–Protein interactions for RNA: ENST00000504771.2

TNFAIP8-206, Transcript of TNF alpha induced protein 8, humanhuman

TSL 1 (best) BASIC

Gene TNFAIP8, Length 8,681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-206ENST00000504771 DNAH14Q0VDD8 3507 aa5.4□□□□□ -1.55
TNFAIP8-206ENST00000504771 NIPBLQ6KC79 2804 aaeCLIP5.39□□□□□ -1.55
TNFAIP8-206ENST00000504771 BRCA2P51587 3418 aa5.39□□□□□ -1.55
TNFAIP8-206ENST00000504771 TENM3Q9P273 2699 aa5.38□□□□□ -1.55
TNFAIP8-206ENST00000504771 LAMA3Q16787 3333 aa5.38□□□□□ -1.55
TNFAIP8-206ENST00000504771 LAMA1P25391 3075 aa5.38□□□□□ -1.55
TNFAIP8-206ENST00000504771 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
TNFAIP8-206ENST00000504771 CDH23Q9H251 3354 aa5.36□□□□□ -1.55
TNFAIP8-206ENST00000504771 PDZD2O15018 2839 aa5.35□□□□□ -1.55
TNFAIP8-206ENST00000504771 TENM1Q9UKZ4 2725 aa5.35□□□□□ -1.55
TNFAIP8-206ENST00000504771 BOD1L1Q8NFC6 3051 aa5.34□□□□□ -1.55
TNFAIP8-206ENST00000504771 KRTAP10-1P60331 282 aa5.34□□□□□ -1.56
TNFAIP8-206ENST00000504771 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.56
TNFAIP8-206ENST00000504771 TGP01266 2768 aa5.33□□□□□ -1.56
TNFAIP8-206ENST00000504771 TNP1P09430 55 aa5.33□□□□□ -1.56
TNFAIP8-206ENST00000504771 ZZEF1O43149 2961 aa5.33□□□□□ -1.56
TNFAIP8-206ENST00000504771 KRTAP10-2P60368 255 aa5.31□□□□□ -1.56
TNFAIP8-206ENST00000504771 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
TNFAIP8-206ENST00000504771 DCHS2Q6V1P9 2916 aa5.3□□□□□ -1.56
TNFAIP8-206ENST00000504771 DMXL1Q9Y485 3027 aa5.29□□□□□ -1.56
TNFAIP8-206ENST00000504771 COL6A3P12111 3177 aa5.29□□□□□ -1.56
TNFAIP8-206ENST00000504771 ADGRG4Q8IZF6 3080 aa5.29□□□□□ -1.56
TNFAIP8-206ENST00000504771 ATMQ13315 3056 aa5.26□□□□□ -1.57
TNFAIP8-206ENST00000504771 ZANQ9Y493 2812 aa5.24□□□□□ -1.57
TNFAIP8-206ENST00000504771 CFAP47Q6ZTR5 3102 aa5.23□□□□□ -1.57
TNFAIP8-206ENST00000504771 TNRC18O15417 2968 aaPredicted RBP5.23□□□□□ -1.57
TNFAIP8-206ENST00000504771 VCANP13611 3396 aa5.22□□□□□ -1.57
TNFAIP8-206ENST00000504771 KRTAP7-1Q8IUC3 87 aa5.2□□□□□ -1.58
TNFAIP8-206ENST00000504771 H0YAA0 97 aa5.19□□□□□ -1.58
TNFAIP8-206ENST00000504771 FBN2P35556 2912 aa5.19□□□□□ -1.58
TNFAIP8-206ENST00000504771 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
TNFAIP8-206ENST00000504771 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
TNFAIP8-206ENST00000504771 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
TNFAIP8-206ENST00000504771 Q6ZRN7 208 aaPredicted RBP5.16□□□□□ -1.58
TNFAIP8-206ENST00000504771 CELSR1Q9NYQ6 3014 aa5.16□□□□□ -1.58
TNFAIP8-206ENST00000504771 TENM4Q6N022 2769 aa5.14□□□□□ -1.59
TNFAIP8-206ENST00000504771 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
TNFAIP8-206ENST00000504771 VWFP04275 2813 aa5.08□□□□□ -1.6
TNFAIP8-206ENST00000504771 SZT2Q5T011 3432 aa5.07□□□□□ -1.6
TNFAIP8-206ENST00000504771 WDFY3Q8IZQ1 3526 aa5.06□□□□□ -1.6
TNFAIP8-206ENST00000504771 USP34Q70CQ2 3546 aa5.06□□□□□ -1.6
TNFAIP8-206ENST00000504771 PKD1L1Q8TDX9 2849 aa5.06□□□□□ -1.6
TNFAIP8-206ENST00000504771 SPEGQ15772 3267 aa5.06□□□□□ -1.6
TNFAIP8-206ENST00000504771 MXRA5Q9NR99 2828 aa5.01□□□□□ -1.61
TNFAIP8-206ENST00000504771 MYO15AQ9UKN7 3530 aa4.97□□□□□ -1.61
TNFAIP8-206ENST00000504771 HRNRQ86YZ3 2850 aaPredicted RBP4.97□□□□□ -1.61
TNFAIP8-206ENST00000504771 ASPMQ8IZT6 3477 aa4.94□□□□□ -1.62
TNFAIP8-206ENST00000504771 EYSQ5T1H1 3165 aa4.94□□□□□ -1.62
TNFAIP8-206ENST00000504771 XP32Q5T750 250 aa4.89□□□□□ -1.63
TNFAIP8-206ENST00000504771 TENM2Q9NT68 2774 aa4.88□□□□□ -1.63
TNFAIP8-206ENST00000504771 COL7A1Q02388 2944 aa4.85□□□□□ -1.63
TNFAIP8-206ENST00000504771 KRTAP1-4P0C5Y4 121 aa4.84□□□□□ -1.63
TNFAIP8-206ENST00000504771 SPTBN5Q9NRC6 3674 aaKnown RBP4.83□□□□□ -1.64
TNFAIP8-206ENST00000504771 DCHS1Q96JQ0 3298 aa4.83□□□□□ -1.64
TNFAIP8-206ENST00000504771 LOC400499M0QZD8 3231 aa4.82□□□□□ -1.64
TNFAIP8-206ENST00000504771 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
TNFAIP8-206ENST00000504771 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
TNFAIP8-206ENST00000504771 LAMA5O15230 3695 aa4.78□□□□□ -1.64
TNFAIP8-206ENST00000504771 ZFHX4Q86UP3 3567 aa4.78□□□□□ -1.64
TNFAIP8-206ENST00000504771 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
TNFAIP8-206ENST00000504771 MEGF8Q7Z7M0 2845 aa4.76□□□□□ -1.65
TNFAIP8-206ENST00000504771 TPRXLQ17RH7 258 aa4.76□□□□□ -1.65
TNFAIP8-206ENST00000504771 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
TNFAIP8-206ENST00000504771 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
TNFAIP8-206ENST00000504771 DMDP11532 3685 aa4.71□□□□□ -1.66
TNFAIP8-206ENST00000504771 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
TNFAIP8-206ENST00000504771 FBN3Q75N90 2809 aa4.69□□□□□ -1.66
TNFAIP8-206ENST00000504771 RELNP78509 3460 aa4.69□□□□□ -1.66
TNFAIP8-206ENST00000504771 CSMD1Q96PZ7 3565 aa4.69□□□□□ -1.66
TNFAIP8-206ENST00000504771 FBN1P35555 2871 aaKnown RBP4.69□□□□□ -1.66
TNFAIP8-206ENST00000504771 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
TNFAIP8-206ENST00000504771 CUBNO60494 3623 aa4.66□□□□□ -1.66
TNFAIP8-206ENST00000504771 INE1O15225 51 aa4.65□□□□□ -1.67
TNFAIP8-206ENST00000504771 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
TNFAIP8-206ENST00000504771 ZFHX3Q15911 3703 aa4.59□□□□□ -1.67
TNFAIP8-206ENST00000504771 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
TNFAIP8-206ENST00000504771 KRTAP21-3Q3LHN1 58 aa4.57□□□□□ -1.68
TNFAIP8-206ENST00000504771 OTOGQ6ZRI0 2925 aa4.56□□□□□ -1.68
TNFAIP8-206ENST00000504771 SVEP1Q4LDE5 3571 aa4.52□□□□□ -1.69
TNFAIP8-206ENST00000504771 NBPF19A0A087WUL8 3843 aa4.52□□□□□ -1.69
TNFAIP8-206ENST00000504771 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
TNFAIP8-206ENST00000504771 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
TNFAIP8-206ENST00000504771 MUC3AQ02505 3323 aa4.38□□□□□ -1.71
TNFAIP8-206ENST00000504771 VPS13CQ709C8 3753 aa4.3□□□□□ -1.72
TNFAIP8-206ENST00000504771 TRRAPQ9Y4A5 3859 aa4.29□□□□□ -1.72
TNFAIP8-206ENST00000504771 CSMD2Q7Z408 3487 aa4.27□□□□□ -1.73
TNFAIP8-206ENST00000504771 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
TNFAIP8-206ENST00000504771 KRTAP3-2Q9BYR7 98 aa4.25□□□□□ -1.73
TNFAIP8-206ENST00000504771 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
TNFAIP8-206ENST00000504771 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
TNFAIP8-206ENST00000504771 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
TNFAIP8-206ENST00000504771 CSMD3Q7Z407 3707 aa4.19□□□□□ -1.74
TNFAIP8-206ENST00000504771 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
TNFAIP8-206ENST00000504771 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
TNFAIP8-206ENST00000504771 AKAP9Q99996 3911 aa4.06□□□□□ -1.76
TNFAIP8-206ENST00000504771 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
TNFAIP8-206ENST00000504771 MT3P25713 68 aa4.03□□□□□ -1.76
TNFAIP8-206ENST00000504771 RYR1P21817 5038 aa4.02□□□□□ -1.77
TNFAIP8-206ENST00000504771 KRTAP10-5P60370 271 aa4□□□□□ -1.77
TNFAIP8-206ENST00000504771 BSNQ9UPA5 3926 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms