RNA–Protein interactions for RNA: ENST00000504771.2

TNFAIP8-206, Transcript of TNF alpha induced protein 8, humanhuman

TSL 1 (best) BASIC

Gene TNFAIP8, Length 8,681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-206ENST00000504771 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
TNFAIP8-206ENST00000504771 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
TNFAIP8-206ENST00000504771 MYT1Q01538 1121 aa15.14■□□□□ 0.01
TNFAIP8-206ENST00000504771 ERICH6Q7L0X2 663 aa14.88□□□□□ -0.03
TNFAIP8-206ENST00000504771 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
TNFAIP8-206ENST00000504771 CCER1Q8TC90 406 aaPredicted RBP14.8□□□□□ -0.04
TNFAIP8-206ENST00000504771 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
TNFAIP8-206ENST00000504771 PCGF6Q9BYE7 350 aa14.54□□□□□ -0.08
TNFAIP8-206ENST00000504771 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.08
TNFAIP8-206ENST00000504771 ZEB1P37275 1124 aaPredicted RBP14.48□□□□□ -0.09
TNFAIP8-206ENST00000504771 APLP2Q06481 763 aa14.46□□□□□ -0.09
TNFAIP8-206ENST00000504771 NEFLP07196 543 aa14.37□□□□□ -0.11
TNFAIP8-206ENST00000504771 SHROOM4Q9ULL8 1493 aa14.32□□□□□ -0.12
TNFAIP8-206ENST00000504771 YTHDC1Q96MU7 727 aaKnown RBP14.22□□□□□ -0.13
TNFAIP8-206ENST00000504771 TTBK1Q5TCY1 1321 aaPredicted RBP14.18□□□□□ -0.14
TNFAIP8-206ENST00000504771 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.15
TNFAIP8-206ENST00000504771 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
TNFAIP8-206ENST00000504771 RTL5Q5HYW3 569 aaPredicted RBP13.91□□□□□ -0.18
TNFAIP8-206ENST00000504771 HRCP23327 699 aa13.88□□□□□ -0.19
TNFAIP8-206ENST00000504771 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
TNFAIP8-206ENST00000504771 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.21
TNFAIP8-206ENST00000504771 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
TNFAIP8-206ENST00000504771 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
TNFAIP8-206ENST00000504771 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP8-206ENST00000504771 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP8-206ENST00000504771 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
TNFAIP8-206ENST00000504771 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
TNFAIP8-206ENST00000504771 PPARGC1BQ86YN6 1023 aaKnown RBP13.55□□□□□ -0.24
TNFAIP8-206ENST00000504771 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
TNFAIP8-206ENST00000504771 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
TNFAIP8-206ENST00000504771 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.25
TNFAIP8-206ENST00000504771 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
TNFAIP8-206ENST00000504771 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
TNFAIP8-206ENST00000504771 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
TNFAIP8-206ENST00000504771 BCANQ96GW7 911 aa13.37□□□□□ -0.27
TNFAIP8-206ENST00000504771 CNGB1Q14028 1251 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP8-206ENST00000504771 ITGAEP38570 1179 aa13.32□□□□□ -0.28
TNFAIP8-206ENST00000504771 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
TNFAIP8-206ENST00000504771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP8-206ENST00000504771 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.28
TNFAIP8-206ENST00000504771 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
TNFAIP8-206ENST00000504771 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
TNFAIP8-206ENST00000504771 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
TNFAIP8-206ENST00000504771 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
TNFAIP8-206ENST00000504771 ANP32CO43423 234 aa13.15□□□□□ -0.3
TNFAIP8-206ENST00000504771 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
TNFAIP8-206ENST00000504771 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP8-206ENST00000504771 NPM2Q86SE8 214 aaKnown RBP13.06□□□□□ -0.32
TNFAIP8-206ENST00000504771 CHIC1Q5VXU3 224 aa13.05□□□□□ -0.32
TNFAIP8-206ENST00000504771 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
TNFAIP8-206ENST00000504771 NBR1Q14596 966 aa12.99□□□□□ -0.33
TNFAIP8-206ENST00000504771 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
TNFAIP8-206ENST00000504771 NEUROD1Q13562 356 aa12.96□□□□□ -0.33
TNFAIP8-206ENST00000504771 FKBP8Q14318 412 aa12.95□□□□□ -0.34
TNFAIP8-206ENST00000504771 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
TNFAIP8-206ENST00000504771 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
TNFAIP8-206ENST00000504771 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
TNFAIP8-206ENST00000504771 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP8-206ENST00000504771 TRIM52Q96A61 297 aa12.86□□□□□ -0.35
TNFAIP8-206ENST00000504771 ARXQ96QS3 562 aa12.84□□□□□ -0.35
TNFAIP8-206ENST00000504771 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
TNFAIP8-206ENST00000504771 ZNF326Q5BKZ1 582 aaKnown RBP12.81□□□□□ -0.36
TNFAIP8-206ENST00000504771 ANP32EQ9BTT0 268 aa12.79□□□□□ -0.36
TNFAIP8-206ENST00000504771 NEFMP07197 916 aa12.78□□□□□ -0.36
TNFAIP8-206ENST00000504771 CCDC136Q96JN2 1154 aa12.76□□□□□ -0.37
TNFAIP8-206ENST00000504771 TRIM44Q96DX7 344 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP8-206ENST00000504771 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
TNFAIP8-206ENST00000504771 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
TNFAIP8-206ENST00000504771 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
TNFAIP8-206ENST00000504771 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
TNFAIP8-206ENST00000504771 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP8-206ENST00000504771 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
TNFAIP8-206ENST00000504771 NAP1L5Q96NT1 182 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP8-206ENST00000504771 BECN1Q14457 450 aa12.63□□□□□ -0.39
TNFAIP8-206ENST00000504771 FAM9BQ8IZU0 186 aa12.62□□□□□ -0.39
TNFAIP8-206ENST00000504771 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
TNFAIP8-206ENST00000504771 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
TNFAIP8-206ENST00000504771 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
TNFAIP8-206ENST00000504771 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
TNFAIP8-206ENST00000504771 PTMAP06454 111 aaKnown RBP12.55□□□□□ -0.4
TNFAIP8-206ENST00000504771 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP8-206ENST00000504771 NCLP19338 710 aaKnown RBP12.54□□□□□ -0.4
TNFAIP8-206ENST00000504771 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
TNFAIP8-206ENST00000504771 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP8-206ENST00000504771 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
TNFAIP8-206ENST00000504771 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP8-206ENST00000504771 DCAF1Q9Y4B6 1507 aa12.5□□□□□ -0.41
TNFAIP8-206ENST00000504771 MIER1Q8N108 512 aa12.5□□□□□ -0.41
TNFAIP8-206ENST00000504771 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
TNFAIP8-206ENST00000504771 MRS2Q9HD23 443 aa12.46□□□□□ -0.41
TNFAIP8-206ENST00000504771 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
TNFAIP8-206ENST00000504771 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
TNFAIP8-206ENST00000504771 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
TNFAIP8-206ENST00000504771 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP8-206ENST00000504771 ZRSR1Q15695 479 aaKnown RBP12.41□□□□□ -0.42
TNFAIP8-206ENST00000504771 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
TNFAIP8-206ENST00000504771 CHAF1AQ13111 956 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP8-206ENST00000504771 MSNP26038 577 aaKnown RBP12.36□□□□□ -0.43
TNFAIP8-206ENST00000504771 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
TNFAIP8-206ENST00000504771 SUPT16HQ9Y5B9 1047 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms